RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 USP48Q86UV5 1035 aa12.2□□□□□ -0.46
PKNOX1-201ENST00000291547 STARD3NLO95772 234 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 RAB3IL1Q8TBN0 382 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 MMRN2Q9H8L6 949 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 ZRANB1Q9UGI0 708 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 TLDC2A0PJX2 215 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 SMC5Q8IY18 1101 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 BRF1Q92994 677 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 RSRC1Q96IZ7 334 aaKnown RBP12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 NPC1L1Q9UHC9 1359 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 MRPS27Q92552 414 aaKnown RBP12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 KRT13P13646 458 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 LMOD1P29536 600 aaPredicted RBP12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 KIF5AQ12840 1032 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 CCDC174Q6PII3 467 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 VAT1LQ9HCJ6 419 aa12.19□□□□□ -0.46
PKNOX1-201ENST00000291547 PABPN1LA6NDY0 278 aaKnown RBP12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 LRRC27Q9C0I9 530 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 KRT86O43790 486 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 NBPF7P0C2Y1 421 aaPredicted RBP12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 ARL1P40616 181 aaPredicted RBP12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 TSHZ3Q63HK5 1081 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 TTC16Q8NEE8 873 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 KCNG4Q8TDN1 519 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 NKTRP30414 1462 aaKnown RBP12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 RHOXF2BP0C7M4 288 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 CAPZA3Q96KX2 299 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 RHOXF2Q9BQY4 288 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 HMG20BQ9P0W2 317 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 TRPM1Q7Z4N2 1603 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 ATP2A1O14983 1001 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 PSMC4P43686 418 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 ANAPC4Q9UJX5 808 aa12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 EDC4Q6P2E9 1401 aaKnown RBP12.18□□□□□ -0.46
PKNOX1-201ENST00000291547 SMIM23A6NLE4 172 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 TBCAO75347 108 aaKnown RBP12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 RGS22Q8NE09 1264 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 IBTKQ9P2D0 1353 aaPredicted RBP12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 NOL3O60936 208 aaKnown RBP12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 VAV2P52735 878 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 KRT83P78385 493 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 KARSQ15046 597 aaKnown RBP12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 TTC22Q5TAA0 569 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 CCDC63Q8NA47 563 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 PPFIBP2Q8ND30 876 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 NCOA7Q8NI08 942 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 POLR3AO14802 1390 aaPredicted RBP12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 A0A1B0GUA9 196 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 SLC5A1P13866 664 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 PRPHP41219 470 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 TUBB4BP68371 445 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 SYT10Q6XYQ8 523 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 YY1AP1Q9H869 796 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 MAP3K9P80192 1104 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 PHF23Q9BUL5 403 aaPredicted RBP12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 EHMT1Q9H9B1 1298 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 SAMD15Q9P1V8 674 aa12.17□□□□□ -0.46
PKNOX1-201ENST00000291547 HMGB2P26583 209 aaKnown RBP12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 FRMPD1Q5SYB0 1578 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 KDM2BQ8NHM5 1336 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 IFT81Q8WYA0 676 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 CCDC42Q96M95 316 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 LZTFL1Q9NQ48 299 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 POLKQ9UBT6 870 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 GUCA1BQ9UMX6 200 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 SYNMO15061 1565 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 KLF18A0A0U1RQI7 1052 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 PSMA7O14818 248 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 IGHDP01880 384 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 U2AF2P26368 475 aaKnown RBP eCLIP12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 TTF1Q15361 905 aaPredicted RBP12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 FAM76AQ8TAV0 307 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 TCEANC2Q96MN5 208 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 SSX2IPQ9Y2D8 614 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 SETDB1Q15047 1291 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 CFAP58Q5T655 872 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 WDR66Q8TBY9 1149 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 MADDQ8WXG6 1647 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 TSPY2A6NKD2 308 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 TUBBP07437 444 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 LACTBP83111 547 aaPredicted RBP12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 TYRO3Q06418 890 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 MAP7D1Q3KQU3 841 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 MFSD6Q6ZSS7 791 aa12.16□□□□□ -0.46
PKNOX1-201ENST00000291547 PLEKHG3A1L390 1219 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 ARID5AQ03989 594 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 WDR78Q5VTH9 848 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 SYNCQ9H7C4 482 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 CPSF2Q9P2I0 782 aaKnown RBP12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.15□□□□□ -0.463e-6■■■■□ 21.7
PKNOX1-201ENST00000291547 ROBO2Q9HCK4 1378 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 STAT6P42226 847 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 PLCB3Q01970 1234 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 DNM1Q05193 864 aaKnown RBP12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 ZNF569Q5MCW4 686 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms