RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 TMEM106CQ9BVX2 250 aa16.68■□□□□ 0.26
PSMB4-201ENST00000290541 RTFDC1Q9BY42 306 aaPredicted RBP16.68■□□□□ 0.26
PSMB4-201ENST00000290541 GREM2Q9H772 168 aa16.68■□□□□ 0.26
PSMB4-201ENST00000290541 ZBTB12Q9Y330 459 aaPredicted RBP16.68■□□□□ 0.26
PSMB4-201ENST00000290541 YDJCA8MPS7 323 aa16.67■□□□□ 0.26
PSMB4-201ENST00000290541 GNAI3P08754 354 aa16.67■□□□□ 0.26
PSMB4-201ENST00000290541 IRX6P78412 446 aaPredicted RBP16.67■□□□□ 0.26
PSMB4-201ENST00000290541 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.67■□□□□ 0.26
PSMB4-201ENST00000290541 DPF2Q92785 391 aa16.67■□□□□ 0.26
PSMB4-201ENST00000290541 CELF1Q92879 486 aaKnown RBP16.67■□□□□ 0.26
PSMB4-201ENST00000290541 HSP90B1P14625 803 aaKnown RBP16.66■□□□□ 0.26
PSMB4-201ENST00000290541 RABL6Q3YEC7 729 aaPredicted RBP16.66■□□□□ 0.26
PSMB4-201ENST00000290541 CCDC152Q4G0S7 254 aa16.66■□□□□ 0.26
PSMB4-201ENST00000290541 RBM17Q96I25 401 aaKnown RBP16.66■□□□□ 0.26
PSMB4-201ENST00000290541 CRAMP1Q96RY5 1269 aa16.66■□□□□ 0.26
PSMB4-201ENST00000290541 CHMP3Q9Y3E7 222 aa16.66■□□□□ 0.26
PSMB4-201ENST00000290541 COL9A1P20849 921 aa16.65■□□□□ 0.26
PSMB4-201ENST00000290541 KIAA2012Q0VF49 1180 aa16.65■□□□□ 0.26
PSMB4-201ENST00000290541 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
PSMB4-201ENST00000290541 GGA3Q9NZ52 723 aa16.65■□□□□ 0.26
PSMB4-201ENST00000290541 DDX19BQ9UMR2 479 aa16.65■□□□□ 0.26
PSMB4-201ENST00000290541 DUOX1Q9NRD9 1551 aa16.64■□□□□ 0.25
PSMB4-201ENST00000290541 GNAI2P04899 355 aa16.64■□□□□ 0.25
PSMB4-201ENST00000290541 ITGA6P23229 1130 aa16.64■□□□□ 0.25
PSMB4-201ENST00000290541 MOB2Q70IA6 237 aa16.64■□□□□ 0.25
PSMB4-201ENST00000290541 SULF1Q8IWU6 871 aa16.64■□□□□ 0.25
PSMB4-201ENST00000290541 ZBTB40Q9NUA8 1239 aa16.64■□□□□ 0.25
PSMB4-201ENST00000290541 ASTN2O75129 1339 aaPredicted RBP16.64■□□□□ 0.25
PSMB4-201ENST00000290541 PRUNE2Q8WUY3 3088 aa16.64■□□□□ 0.25
PSMB4-201ENST00000290541 CENPBP07199 599 aaPredicted RBP16.63■□□□□ 0.25
PSMB4-201ENST00000290541 SREBF2Q12772 1141 aa16.63■□□□□ 0.25
PSMB4-201ENST00000290541 GRAPQ13588 217 aa16.63■□□□□ 0.25
PSMB4-201ENST00000290541 GRAPLQ8TC17 118 aaPredicted RBP16.63■□□□□ 0.25
PSMB4-201ENST00000290541 ZNF594Q96JF6 807 aaPredicted RBP16.63■□□□□ 0.25
PSMB4-201ENST00000290541 RTL9Q8NET4 1388 aa16.63■□□□□ 0.25
PSMB4-201ENST00000290541 RFX5P48382 616 aaPredicted RBP16.62■□□□□ 0.25
PSMB4-201ENST00000290541 CAP1Q01518 475 aa16.62■□□□□ 0.25
PSMB4-201ENST00000290541 GPR153Q6NV75 609 aa16.62■□□□□ 0.25
PSMB4-201ENST00000290541 SUPT20HQ8NEM7 779 aa16.62■□□□□ 0.25
PSMB4-201ENST00000290541 EXOC6Q8TAG9 804 aa16.62■□□□□ 0.25
PSMB4-201ENST00000290541 KLHDC4Q8TBB5 520 aa16.62■□□□□ 0.25
PSMB4-201ENST00000290541 SPEF2Q9C093 1822 aa16.61■□□□□ 0.25
PSMB4-201ENST00000290541 RPS8P62241 208 aaKnown RBP16.61■□□□□ 0.25
PSMB4-201ENST00000290541 MKRN3Q13064 507 aaKnown RBP16.61■□□□□ 0.25
PSMB4-201ENST00000290541 DEFB123Q8N688 67 aa16.61■□□□□ 0.25
PSMB4-201ENST00000290541 ATP6V0A2Q9Y487 856 aa16.61■□□□□ 0.25
PSMB4-201ENST00000290541 PNMA6EA0A0J9YXQ4 647 aa16.6■□□□□ 0.25
PSMB4-201ENST00000290541 ANKRD18BA2A2Z9 1011 aa16.6■□□□□ 0.25
PSMB4-201ENST00000290541 IFIT5Q13325 482 aaKnown RBP16.6■□□□□ 0.25
PSMB4-201ENST00000290541 RBM26Q5T8P6 1007 aaKnown RBP16.6■□□□□ 0.25
PSMB4-201ENST00000290541 Q7L0L9 218 aa16.6■□□□□ 0.25
PSMB4-201ENST00000290541 CD99L2Q8TCZ2 262 aa16.6■□□□□ 0.25
PSMB4-201ENST00000290541 DPF3Q92784 378 aa16.6■□□□□ 0.25
PSMB4-201ENST00000290541 ZNF646O15015 1829 aaPredicted RBP16.6■□□□□ 0.25
PSMB4-201ENST00000290541 TTC28Q96AY4 2481 aa16.59■□□□□ 0.25
PSMB4-201ENST00000290541 WTIPA6NIX2 430 aaPredicted RBP16.59■□□□□ 0.25
PSMB4-201ENST00000290541 UBE2Q2LH0YL09 131 aa16.59■□□□□ 0.25
PSMB4-201ENST00000290541 PSMD14O00487 310 aa16.59■□□□□ 0.25
PSMB4-201ENST00000290541 BBOX1O75936 387 aa16.59■□□□□ 0.25
PSMB4-201ENST00000290541 PLA2G5P39877 138 aa16.59■□□□□ 0.25
PSMB4-201ENST00000290541 CCDC57Q2TAC2 916 aa16.59■□□□□ 0.25
PSMB4-201ENST00000290541 KIF4BQ2VIQ3 1234 aa16.59■□□□□ 0.25
PSMB4-201ENST00000290541 CEP85Q6P2H3 762 aa16.59■□□□□ 0.25
PSMB4-201ENST00000290541 ANKRD18AQ8IVF6 992 aa16.59■□□□□ 0.25
PSMB4-201ENST00000290541 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
PSMB4-201ENST00000290541 PUS3Q9BZE2 481 aaKnown RBP16.59■□□□□ 0.25
PSMB4-201ENST00000290541 PA2G4Q9UQ80 394 aaKnown RBP16.59■□□□□ 0.25
PSMB4-201ENST00000290541 SRGAP3O43295 1099 aa16.58■□□□□ 0.24
PSMB4-201ENST00000290541 ALDH1A1P00352 501 aa16.58■□□□□ 0.24
PSMB4-201ENST00000290541 ATP8B2P98198 1209 aa16.58■□□□□ 0.24
PSMB4-201ENST00000290541 MTX1Q13505 466 aa16.58■□□□□ 0.24
PSMB4-201ENST00000290541 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
PSMB4-201ENST00000290541 SIRT2Q8IXJ6 389 aa16.58■□□□□ 0.24
PSMB4-201ENST00000290541 SHISA4Q96DD7 197 aa16.58■□□□□ 0.24
PSMB4-201ENST00000290541 CDC5LQ99459 802 aaKnown RBP16.58■□□□□ 0.24
PSMB4-201ENST00000290541 MTMR10Q9NXD2 777 aa16.58■□□□□ 0.24
PSMB4-201ENST00000290541 RAPGEFL1Q9UHV5 662 aa16.58■□□□□ 0.24
PSMB4-201ENST00000290541 HDAC5Q9UQL6 1122 aa16.58■□□□□ 0.24
PSMB4-201ENST00000290541 LRRC37AA6NMS7 1700 aa16.58■□□□□ 0.24
PSMB4-201ENST00000290541 PTPN12Q05209 780 aaKnown RBP16.57■□□□□ 0.24
PSMB4-201ENST00000290541 SP8Q8IXZ3 490 aa16.57■□□□□ 0.24
PSMB4-201ENST00000290541 EFCC1Q9HA90 598 aa16.57■□□□□ 0.24
PSMB4-201ENST00000290541 PCDHB15Q9Y5E8 787 aa16.57■□□□□ 0.24
PSMB4-201ENST00000290541 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
PSMB4-201ENST00000290541 RPS12P25398 132 aaKnown RBP16.56■□□□□ 0.24
PSMB4-201ENST00000290541 IGHMBP2P38935 993 aaKnown RBP16.56■□□□□ 0.24
PSMB4-201ENST00000290541 POLA2Q14181 598 aa16.56■□□□□ 0.24
PSMB4-201ENST00000290541 LRRC24Q50LG9 513 aa16.56■□□□□ 0.24
PSMB4-201ENST00000290541 TAF7LQ5H9L4 462 aa16.56■□□□□ 0.24
PSMB4-201ENST00000290541 DPP8Q6V1X1 898 aaPredicted RBP16.56■□□□□ 0.24
PSMB4-201ENST00000290541 BSDC1Q9NW68 430 aaPredicted RBP16.56■□□□□ 0.24
PSMB4-201ENST00000290541 LAMA2P24043 3122 aaKnown RBP16.55■□□□□ 0.24
PSMB4-201ENST00000290541 GPSM2P81274 684 aa16.55■□□□□ 0.24
PSMB4-201ENST00000290541 SLC9C1Q4G0N8 1177 aa16.55■□□□□ 0.24
PSMB4-201ENST00000290541 ANGEL2Q5VTE6 544 aaKnown RBP16.55■□□□□ 0.24
PSMB4-201ENST00000290541 SSH3Q8TE77 659 aa16.55■□□□□ 0.24
PSMB4-201ENST00000290541 SIL1Q9H173 461 aa16.55■□□□□ 0.24
PSMB4-201ENST00000290541 CHMP4BQ9H444 224 aaKnown RBP16.55■□□□□ 0.24
PSMB4-201ENST00000290541 MINPP1Q9UNW1 487 aa16.55■□□□□ 0.24
PSMB4-201ENST00000290541 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms