RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 FKBP4Q02790 459 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTPDC1-201ENST00000288976 ZSCAN25Q6NSZ9 544 aa10.19□□□□□ -0.78
PTPDC1-201ENST00000288976 SPATA5Q8NB90 893 aa10.19□□□□□ -0.78
PTPDC1-201ENST00000288976 POLLQ9UGP5 575 aa10.19□□□□□ -0.78
PTPDC1-201ENST00000288976 ZGPATQ8N5A5 531 aaKnown RBP10.19□□□□□ -0.78
PTPDC1-201ENST00000288976 TDRD7Q8NHU6 1098 aaKnown RBP10.19□□□□□ -0.78
PTPDC1-201ENST00000288976 TIAM2Q8IVF5 1701 aa10.18□□□□□ -0.78
PTPDC1-201ENST00000288976 A0A0G2JLW4 131 aa10.18□□□□□ -0.78
PTPDC1-201ENST00000288976 ZFYP08048 801 aaPredicted RBP10.18□□□□□ -0.78
PTPDC1-201ENST00000288976 MCAMP43121 646 aa10.18□□□□□ -0.78
PTPDC1-201ENST00000288976 PHKA1P46020 1223 aa10.18□□□□□ -0.78
PTPDC1-201ENST00000288976 SKAP1Q86WV1 359 aa10.18□□□□□ -0.78
PTPDC1-201ENST00000288976 KBTBD3Q8NAB2 608 aa10.18□□□□□ -0.78
PTPDC1-201ENST00000288976 FAM205AQ6ZU69 1335 aa10.18□□□□□ -0.78
PTPDC1-201ENST00000288976 NSFL1CQ9UNZ2 370 aaKnown RBP10.18□□□□□ -0.78
PTPDC1-201ENST00000288976 SUGT1Q9Y2Z0 365 aa10.18□□□□□ -0.78
PTPDC1-201ENST00000288976 RASGRF1Q13972 1273 aa10.17□□□□□ -0.78
PTPDC1-201ENST00000288976 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.17□□□□□ -0.78
PTPDC1-201ENST00000288976 VPS37DQ86XT2 251 aa10.17□□□□□ -0.78
PTPDC1-201ENST00000288976 HMG20BQ9P0W2 317 aa10.17□□□□□ -0.78
PTPDC1-201ENST00000288976 BCAMP50895 628 aa10.17□□□□□ -0.78
PTPDC1-201ENST00000288976 KIAA2012Q0VF49 1180 aa10.17□□□□□ -0.78
PTPDC1-201ENST00000288976 GNL2Q13823 731 aaKnown RBP10.17□□□□□ -0.78
PTPDC1-201ENST00000288976 TBC1D22AQ8WUA7 517 aa10.17□□□□□ -0.78
PTPDC1-201ENST00000288976 BOLA2Q9H3K6 86 aa10.17□□□□□ -0.78
PTPDC1-201ENST00000288976 LAMA4Q16363 1823 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 MMP14P50281 582 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 TSHZ3Q63HK5 1081 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 SPTY2D1Q68D10 685 aaPredicted RBP10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 WDR66Q8TBY9 1149 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 BACH2Q9BYV9 841 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 PRM3Q9NNZ6 103 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 WASHC4Q2M389 1173 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 PODNQ7Z5L7 613 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 RUFY2Q8WXA3 655 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 CWC22Q9HCG8 908 aaKnown RBP10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 HELLSQ9NRZ9 838 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 FOCADQ5VW36 1801 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 CHMLP26374 656 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 KLRK1P26718 216 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 GYG1P46976 350 aa10.16□□□□□ -0.78
PTPDC1-201ENST00000288976 TBC1D9Q6ZT07 1266 aa10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 CD209Q9NNX6 404 aa10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 CERS3Q8IU89 383 aa10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 DNAJC2Q99543 621 aaKnown RBP10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 C6orf229H3BNL8 230 aa10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 CYP2E1P05181 493 aaPredicted RBP10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 ZAP70P43403 619 aa10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 MFAP1P55081 439 aaKnown RBP10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 UBE3CQ15386 1083 aa10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 FSD1Q9BTV5 496 aa10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 FHDC1Q9C0D6 1143 aaPredicted RBP10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 ZC3H12CQ9C0D7 883 aaKnown RBP10.15□□□□□ -0.78
PTPDC1-201ENST00000288976 MYO5AQ9Y4I1 1855 aaKnown RBP10.15□□□□□ -0.79
PTPDC1-201ENST00000288976 RNF113AO15541 343 aaKnown RBP10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 C21orf2O43822 256 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 SCARF1Q14162 830 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 DDX60LQ5H9U9 1706 aaKnown RBP10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 GOLIM4O00461 696 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 RILPL2Q969X0 211 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 WWC3Q9ULE0 1092 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 LAMB1P07942 1786 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 RPAP1Q9BWH6 1393 aaPredicted RBP10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 IL27Q8NEV9 243 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 TAOK3Q9H2K8 898 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 SBF1O95248 1867 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 MAST3O60307 1309 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 MYO3BQ8WXR4 1341 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 ECM29Q5VYK3 1845 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 MAP3K12Q12852 859 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 SPRYD3Q8NCJ5 442 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 NLGN2Q8NFZ4 835 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 DIAPH3Q9NSV4 1193 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 COL4A5P29400 1685 aa10.14□□□□□ -0.79
PTPDC1-201ENST00000288976 GSTO1P78417 241 aa10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 ZMYM1Q5SVZ6 1142 aa10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 TXNRD3Q86VQ6 643 aa10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 ESYT1Q9BSJ8 1104 aa10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 ADD2P35612 726 aa10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 IARSP41252 1262 aaKnown RBP10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 PIH1D3Q9NQM4 214 aaKnown RBP10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 ZMYM6O95789 1325 aa10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 TCRBV5S4A2TA0A5A2 114 aa10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 REC8O95072 547 aa10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 MAP4K4O95819 1239 aaPredicted RBP10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 STRIP1Q5VSL9 837 aa10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 SYT17Q9BSW7 474 aa10.13□□□□□ -0.79
PTPDC1-201ENST00000288976 GOLGA6L4A6NEF3 574 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 SNAP23O00161 211 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 ECE2O60344 883 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 KIAA1211Q6ZU35 1233 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 CHD4Q14839 1912 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 SGSM2O43147 1006 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 SLC51AQ86UW1 340 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 SLF2Q8IX21 1173 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 MRIQ9BWK5 157 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 OLFM4Q6UX06 510 aa10.12□□□□□ -0.79
PTPDC1-201ENST00000288976 APPBP2Q92624 585 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms