RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 BAG4O95429 457 aaKnown RBP8.94□□□□□ -0.98
TRIM42-201ENST00000286349 VPS53Q5VIR6 699 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 ANKRD23Q86SG2 305 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 TSPAN18Q96SJ8 248 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 MTMR7Q9Y216 660 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 NIP7Q9Y221 180 aaKnown RBP eCLIP8.94□□□□□ -0.98
TRIM42-201ENST00000286349 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.94□□□□□ -0.98
TRIM42-201ENST00000286349 MED23Q9ULK4 1368 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 POLRMTO00411 1230 aaKnown RBP8.94□□□□□ -0.98
TRIM42-201ENST00000286349 KCNJ4P48050 445 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 NMIQ13287 307 aaPredicted RBP8.94□□□□□ -0.98
TRIM42-201ENST00000286349 MYBPC2Q14324 1141 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 NECTIN1Q15223 517 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 NLGN1Q8N2Q7 840 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 CHMP4CQ96CF2 233 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 TTC14Q96N46 770 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 MYCBPQ99417 103 aaPredicted RBP8.94□□□□□ -0.98
TRIM42-201ENST00000286349 SH2B1Q9NRF2 756 aaPredicted RBP8.94□□□□□ -0.98
TRIM42-201ENST00000286349 LIMCH1Q9UPQ0 1083 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 ATF5Q9Y2D1 282 aaPredicted RBP8.94□□□□□ -0.98
TRIM42-201ENST00000286349 CYP46A1Q9Y6A2 500 aa8.94□□□□□ -0.98
TRIM42-201ENST00000286349 FSD2A1L4K1 749 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 FAM177BA6PVY3 158 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 KRT32Q14532 448 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 ANKRD1Q15327 319 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 ATG9AQ7Z3C6 839 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 CCDC24Q8N4L8 307 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 SGIP1Q9BQI5 828 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 ZSWIM6Q9HCJ5 1215 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 SPEF2Q9C093 1822 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 ZBTB22O15209 634 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 NTSR2O95665 410 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 MMP10P09238 476 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 TSGA10IPQ3SY00 556 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 FOXD4L6Q3SYB3 417 aaPredicted RBP8.93□□□□□ -0.98
TRIM42-201ENST00000286349 FOXD4L3Q6VB84 417 aaPredicted RBP8.93□□□□□ -0.98
TRIM42-201ENST00000286349 ARMCX6Q7L4S7 300 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 ZGPATQ8N5A5 531 aaKnown RBP8.93□□□□□ -0.98
TRIM42-201ENST00000286349 SLC16A10Q8TF71 515 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 FAM89AQ96GI7 184 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 SETDB2Q96T68 719 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 UPF3BQ9BZI7 483 aaKnown RBP8.93□□□□□ -0.98
TRIM42-201ENST00000286349 ALDH8A1Q9H2A2 487 aaPredicted RBP8.93□□□□□ -0.98
TRIM42-201ENST00000286349 CEP126Q9P2H0 1117 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 CGNQ9P2M7 1197 aaKnown RBP8.93□□□□□ -0.98
TRIM42-201ENST00000286349 ZNF652Q9Y2D9 606 aa8.93□□□□□ -0.98
TRIM42-201ENST00000286349 RBM8AQ9Y5S9 174 aaKnown RBP8.93□□□□□ -0.98
TRIM42-201ENST00000286349 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.93□□□□□ -0.98
TRIM42-201ENST00000286349 ABCC12Q96J65 1359 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 QSER1Q2KHR3 1735 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 ZNF609O15014 1411 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 BCORQ6W2J9 1755 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 CSF1RP07333 972 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 CCDC172P0C7W6 258 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 CASTP20810 708 aaKnown RBP8.92□□□□□ -0.98
TRIM42-201ENST00000286349 KLHL40Q2TBA0 621 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 CREB3L3Q68CJ9 461 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 PRPF40BQ6NWY9 871 aaKnown RBP8.92□□□□□ -0.98
TRIM42-201ENST00000286349 RUFY3Q7L099 469 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 ZNF513Q8N8E2 541 aaPredicted RBP8.92□□□□□ -0.98
TRIM42-201ENST00000286349 KBTBD3Q8NAB2 608 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 MRVI1Q9Y6F6 885 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 SCN7AQ01118 1682 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 CASZ1Q86V15 1759 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 SERPINB2P05120 415 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 PTGER2P43116 358 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 PTH1RQ03431 593 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 IFIT5Q13325 482 aaKnown RBP8.92□□□□□ -0.98
TRIM42-201ENST00000286349 FAM227BQ96M60 508 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 DBNDD2Q9BQY9 259 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 HELLSQ9NRZ9 838 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 PDRG1Q9NUG6 133 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 U3KPZ7 1027 aaPredicted RBP8.92□□□□□ -0.98
TRIM42-201ENST00000286349 SH3TC1Q8TE82 1336 aa8.92□□□□□ -0.98
TRIM42-201ENST00000286349 WDR33Q9C0J8 1336 aaKnown RBP8.92□□□□□ -0.98
TRIM42-201ENST00000286349 BRD1O95696 1058 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 AK2P54819 239 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 ERFEQ4G0M1 354 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 MCMDC2Q4G0Z9 681 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 PARP10Q53GL7 1025 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 CCDC158Q5M9N0 1113 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 C3orf67Q6ZVT6 689 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 RASEFQ8IZ41 740 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 JAKMIP1Q96N16 626 aaKnown RBP8.91□□□□□ -0.98
TRIM42-201ENST00000286349 UTP14AQ9BVJ6 771 aaKnown RBP8.91□□□□□ -0.98
TRIM42-201ENST00000286349 MTFR1LQ9H019 292 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 TRMT112Q9UI30 125 aaKnown RBP8.91□□□□□ -0.98
TRIM42-201ENST00000286349 RIPOR2Q9Y4F9 1068 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 ANKRD36CQ5JPF3 1778 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 NUP98P52948 1817 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 RPAP1Q9BWH6 1393 aaPredicted RBP8.91□□□□□ -0.98
TRIM42-201ENST00000286349 A0A0D9SFI3 127 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 PRR5LQ6MZQ0 368 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 NEUROD6Q96NK8 337 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 PAG1Q9NWQ8 432 aa8.91□□□□□ -0.98
TRIM42-201ENST00000286349 SLC27A2O14975 620 aa8.9□□□□□ -0.98
TRIM42-201ENST00000286349 HCLS1P14317 486 aaPredicted RBP8.9□□□□□ -0.98
TRIM42-201ENST00000286349 MRE11P49959 708 aa8.9□□□□□ -0.98
TRIM42-201ENST00000286349 MCTP1Q6DN14 999 aa8.9□□□□□ -0.98
TRIM42-201ENST00000286349 EP400NLQ6ZTU2 488 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms