RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 BLOC1S2Q6QNY1 142 aa21.59■■□□□ 1.05
PDLIM3-201ENST00000284767 MPNDQ8N594 471 aa21.59■■□□□ 1.05
PDLIM3-201ENST00000284767 TPCN1Q9ULQ1 816 aa21.59■■□□□ 1.05
PDLIM3-201ENST00000284767 MPHOSPH8Q99549 860 aa21.58■■□□□ 1.05
PDLIM3-201ENST00000284767 BCL2L12Q9HB09 334 aa21.58■■□□□ 1.05
PDLIM3-201ENST00000284767 HELLSQ9NRZ9 838 aa21.58■■□□□ 1.05
PDLIM3-201ENST00000284767 TBC1D9BQ66K14 1250 aa21.58■■□□□ 1.04
PDLIM3-201ENST00000284767 GIMAP6Q6P9H5 292 aa21.58■■□□□ 1.04
PDLIM3-201ENST00000284767 CCDC24Q8N4L8 307 aa21.58■■□□□ 1.04
PDLIM3-201ENST00000284767 CCNL1Q9UK58 526 aaPredicted RBP21.58■■□□□ 1.04
PDLIM3-201ENST00000284767 GNPATO15228 680 aa21.57■■□□□ 1.04
PDLIM3-201ENST00000284767 WASHC4Q2M389 1173 aa21.57■■□□□ 1.04
PDLIM3-201ENST00000284767 CCDC102BQ68D86 513 aa21.57■■□□□ 1.04
PDLIM3-201ENST00000284767 PRDM4Q9UKN5 801 aa21.57■■□□□ 1.04
PDLIM3-201ENST00000284767 ZNF652Q9Y2D9 606 aa21.57■■□□□ 1.04
PDLIM3-201ENST00000284767 HSPD1P10809 573 aaKnown RBP21.57■■□□□ 1.04
PDLIM3-201ENST00000284767 DNM1Q05193 864 aaKnown RBP21.57■■□□□ 1.04
PDLIM3-201ENST00000284767 STOX1Q6ZVD7 989 aa21.57■■□□□ 1.04
PDLIM3-201ENST00000284767 KIF3AQ9Y496 699 aa21.57■■□□□ 1.04
PDLIM3-201ENST00000284767 RPS6KB1P23443 525 aa21.56■■□□□ 1.04
PDLIM3-201ENST00000284767 PSMA5P28066 241 aa21.56■■□□□ 1.04
PDLIM3-201ENST00000284767 CCDC152Q4G0S7 254 aa21.56■■□□□ 1.04
PDLIM3-201ENST00000284767 U3KPZ7 1027 aaPredicted RBP21.56■■□□□ 1.04
PDLIM3-201ENST00000284767 CNTNAP4Q9C0A0 1308 aa21.56■■□□□ 1.04
PDLIM3-201ENST00000284767 GOLGA6L6A8MZA4 724 aa21.56■■□□□ 1.04
PDLIM3-201ENST00000284767 CCDC192P0DO97 292 aa21.56■■□□□ 1.04
PDLIM3-201ENST00000284767 TTLL5Q6EMB2 1281 aa21.56■■□□□ 1.04
PDLIM3-201ENST00000284767 KIAA1524Q8TCG1 905 aa21.56■■□□□ 1.04
PDLIM3-201ENST00000284767 AK7Q96M32 723 aa21.56■■□□□ 1.04
PDLIM3-201ENST00000284767 HMG20BQ9P0W2 317 aa21.56■■□□□ 1.04
PDLIM3-201ENST00000284767 SPEF2Q9C093 1822 aa21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 WTIPA6NIX2 430 aaPredicted RBP21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 TOB2Q14106 344 aaPredicted RBP21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 LRRC2Q9BYS8 371 aa21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 PUS7LQ9H0K6 701 aaKnown RBP21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 AKAP11Q9UKA4 1901 aa21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 LRP5O75197 1615 aa21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 BCORQ6W2J9 1755 aa21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 FGFR2P21802 821 aa21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 PUM3Q15397 648 aaKnown RBP21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 ZNF710Q8N1W2 664 aa21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 MROH5Q6ZUA9 1318 aa21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 TAF1P21675 1872 aa21.55■■□□□ 1.04
PDLIM3-201ENST00000284767 TSGA10IPQ3SY00 556 aa21.54■■□□□ 1.04
PDLIM3-201ENST00000284767 CLEC4GQ6UXB4 293 aa21.54■■□□□ 1.04
PDLIM3-201ENST00000284767 SEPT12Q8IYM1 358 aa21.54■■□□□ 1.04
PDLIM3-201ENST00000284767 C17orf53Q8N3J3 647 aaPredicted RBP21.54■■□□□ 1.04
PDLIM3-201ENST00000284767 PIH1D3Q9NQM4 214 aaKnown RBP21.54■■□□□ 1.04
PDLIM3-201ENST00000284767 FOXP2O15409 715 aa21.54■■□□□ 1.04
PDLIM3-201ENST00000284767 NEK1Q96PY6 1258 aa21.54■■□□□ 1.04
PDLIM3-201ENST00000284767 TPRNQ4KMQ1 711 aa21.53■■□□□ 1.04
PDLIM3-201ENST00000284767 LPIN2Q92539 896 aa21.53■■□□□ 1.04
PDLIM3-201ENST00000284767 MYO5AQ9Y4I1 1855 aaKnown RBP21.53■■□□□ 1.04
PDLIM3-201ENST00000284767 STK3Q13188 491 aa21.53■■□□□ 1.04
PDLIM3-201ENST00000284767 AP5Z1O43299 807 aa21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 PLCB2Q00722 1185 aa21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 ELP1O95163 1332 aa21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 NHSQ6T4R5 1651 aa21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 ABCC12Q96J65 1359 aa21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 RPS6KA4O75676 772 aa21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 IDH1O75874 414 aaKnown RBP21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 IGHMBP2P38935 993 aaKnown RBP21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 CHAF1AQ13111 956 aaPredicted RBP21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 DSCC1Q9BVC3 393 aa21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 KCNF1Q9H3M0 494 aa21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 ZNF831Q5JPB2 1677 aa21.52■■□□□ 1.04
PDLIM3-201ENST00000284767 GTF2E1P29083 439 aaPredicted RBP21.51■■□□□ 1.03
PDLIM3-201ENST00000284767 VPS37CA5D8V6 355 aaPredicted RBP21.51■■□□□ 1.03
PDLIM3-201ENST00000284767 KRT85P78386 507 aa21.51■■□□□ 1.03
PDLIM3-201ENST00000284767 CHRNDQ07001 517 aa21.51■■□□□ 1.03
PDLIM3-201ENST00000284767 FAM200AQ8TCP9 573 aa21.51■■□□□ 1.03
PDLIM3-201ENST00000284767 ARID3AQ99856 593 aa21.51■■□□□ 1.03
PDLIM3-201ENST00000284767 BCAMP50895 628 aa21.5■■□□□ 1.03
PDLIM3-201ENST00000284767 HAND2P61296 217 aa21.5■■□□□ 1.03
PDLIM3-201ENST00000284767 SLC9C2Q5TAH2 1124 aa21.5■■□□□ 1.03
PDLIM3-201ENST00000284767 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
PDLIM3-201ENST00000284767 ARHGEF1Q92888 912 aaKnown RBP21.5■■□□□ 1.03
PDLIM3-201ENST00000284767 NARFQ9UHQ1 456 aa21.5■■□□□ 1.03
PDLIM3-201ENST00000284767 Q6ZUG5 572 aa21.5■■□□□ 1.03
PDLIM3-201ENST00000284767 ARID4AP29374 1257 aaPredicted RBP21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 RASGRF1Q13972 1273 aa21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 KRT32Q14532 448 aa21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 CHST3Q7LGC8 479 aa21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 APPBP2Q92624 585 aa21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 WWC3Q9ULE0 1092 aa21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 IQSEC3Q9UPP2 1182 aaPredicted RBP21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 RTCBQ9Y3I0 505 aaKnown RBP21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 SLC5A1P13866 664 aa21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 PDCP20941 246 aa21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 MAP3K11Q16584 847 aa21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 RC3H1Q5TC82 1133 aaKnown RBP21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 LRRC4BQ9NT99 713 aa21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 TRPC5Q9UL62 973 aaPredicted RBP21.49■■□□□ 1.03
PDLIM3-201ENST00000284767 ZPR1O75312 459 aa21.48■■□□□ 1.03
PDLIM3-201ENST00000284767 TSC1Q92574 1164 aa21.48■■□□□ 1.03
PDLIM3-201ENST00000284767 PYCARDQ9ULZ3 195 aa21.48■■□□□ 1.03
PDLIM3-201ENST00000284767 GPAA1O43292 621 aa21.48■■□□□ 1.03
PDLIM3-201ENST00000284767 LARP1BQ659C4 914 aaKnown RBP21.48■■□□□ 1.03
PDLIM3-201ENST00000284767 CELF1Q92879 486 aaKnown RBP21.48■■□□□ 1.03
PDLIM3-201ENST00000284767 ZNF512BQ96KM6 892 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms