RNA–Protein interactions for RNA: ENST00000284384.6

PRKCA-201, Transcript of protein kinase C alpha, humanhuman

TSL 5

Gene PRKCA, Length 2,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-201ENST00000284384 RPUSD2Q8IZ73 545 aaKnown RBP9.43□□□□□ -0.9
PRKCA-201ENST00000284384 HELBQ8NG08 1087 aaPredicted RBP9.43□□□□□ -0.9
PRKCA-201ENST00000284384 KAZALD1Q96I82 304 aa9.43□□□□□ -0.9
PRKCA-201ENST00000284384 RBSNQ9H1K0 784 aa9.43□□□□□ -0.9
PRKCA-201ENST00000284384 IL1RAPL2Q9NP60 686 aa9.43□□□□□ -0.9
PRKCA-201ENST00000284384 CUEDC1Q9NWM3 386 aaPredicted RBP9.43□□□□□ -0.9
PRKCA-201ENST00000284384 MAP3K20Q9NYL2 800 aaKnown RBP9.43□□□□□ -0.9
PRKCA-201ENST00000284384 AFF2P51816 1311 aa9.43□□□□□ -0.9
PRKCA-201ENST00000284384 DISP2A7MBM2 1401 aa9.43□□□□□ -0.9
PRKCA-201ENST00000284384 NRAPQ86VF7 1730 aa9.43□□□□□ -0.9
PRKCA-201ENST00000284384 ZSCAN20P17040 1043 aaPredicted RBP9.43□□□□□ -0.9
PRKCA-201ENST00000284384 MARSP56192 900 aaKnown RBP9.43□□□□□ -0.9
PRKCA-201ENST00000284384 G3BP1Q13283 466 aaKnown RBP eCLIP9.43□□□□□ -0.94e-6■■■■□ 21.1
PRKCA-201ENST00000284384 DNTTIP2Q5QJE6 756 aaKnown RBP9.43□□□□□ -0.9
PRKCA-201ENST00000284384 FMNL3Q8IVF7 1028 aa9.43□□□□□ -0.9
PRKCA-201ENST00000284384 ZCRB1Q8TBF4 217 aaKnown RBP9.43□□□□□ -0.9
PRKCA-201ENST00000284384 STAG1Q8WVM7 1258 aa9.43□□□□□ -0.9
PRKCA-201ENST00000284384 PIK3R5Q8WYR1 880 aa9.43□□□□□ -0.9
PRKCA-201ENST00000284384 LSG1Q9H089 658 aaKnown RBP9.43□□□□□ -0.9
PRKCA-201ENST00000284384 BICC1Q9H694 974 aaKnown RBP9.43□□□□□ -0.9
PRKCA-201ENST00000284384 POLR3EQ9NVU0 708 aa9.43□□□□□ -0.9
PRKCA-201ENST00000284384 KAT6BQ8WYB5 2073 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 IL2RBP14784 551 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 CWF19L2Q2TBE0 894 aaKnown RBP9.42□□□□□ -0.9
PRKCA-201ENST00000284384 NUTM1Q86Y26 1132 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 CCAR1Q8IX12 1150 aaKnown RBP9.42□□□□□ -0.9
PRKCA-201ENST00000284384 XAGE3Q8WTP9 111 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 PRDM11Q9NQV5 511 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 COL4A3BPQ9Y5P4 624 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 LAMB2P55268 1798 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 ARAP2Q8WZ64 1704 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 GOLGA6CA6NDK9 693 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 GOLGA6BA6NDN3 693 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 GOLGA6DP0CG33 693 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 UNC5CLQ8IV45 518 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 TSPAN18Q96SJ8 248 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 GPR108Q9NPR9 543 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 DIAPH3Q9NSV4 1193 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 ATG3Q9NT62 314 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 GOLGA6AQ9NYA3 693 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 FRMD4BQ9Y2L6 1034 aa9.42□□□□□ -0.9
PRKCA-201ENST00000284384 MYH7P12883 1935 aa9.41□□□□□ -0.9
PRKCA-201ENST00000284384 MED23Q9ULK4 1368 aa9.41□□□□□ -0.9
PRKCA-201ENST00000284384 ANXA1P04083 346 aa9.41□□□□□ -0.9
PRKCA-201ENST00000284384 PRIM1P49642 420 aaKnown RBP9.41□□□□□ -0.9
PRKCA-201ENST00000284384 NEK4P51957 841 aa9.41□□□□□ -0.9
PRKCA-201ENST00000284384 TMX3Q96JJ7 454 aa9.41□□□□□ -0.9
PRKCA-201ENST00000284384 SENP7Q9BQF6 1050 aa9.41□□□□□ -0.9
PRKCA-201ENST00000284384 GTPBP4Q9BZE4 634 aaKnown RBP9.41□□□□□ -0.9
PRKCA-201ENST00000284384 DMGDHQ9UI17 866 aaKnown RBP9.41□□□□□ -0.9
PRKCA-201ENST00000284384 TRPC5Q9UL62 973 aaPredicted RBP9.41□□□□□ -0.9
PRKCA-201ENST00000284384 PRAMEF22A3QJZ6 481 aa9.41□□□□□ -0.9
PRKCA-201ENST00000284384 COPS6Q7L5N1 327 aa9.41□□□□□ -0.9
PRKCA-201ENST00000284384 TEX13AQ9BXU3 409 aaPredicted RBP9.41□□□□□ -0.9
PRKCA-201ENST00000284384 JADE2Q9NQC1 790 aa9.41□□□□□ -0.9
PRKCA-201ENST00000284384 TPX2Q9ULW0 747 aaKnown RBP9.41□□□□□ -0.9
PRKCA-201ENST00000284384 KIF20AO95235 890 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 CASP7P55210 303 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 TSHZ3Q63HK5 1081 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 ATL2Q8NHH9 583 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 SCYL1Q96KG9 808 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 ALDH8A1Q9H2A2 487 aaPredicted RBP9.4□□□□□ -0.9
PRKCA-201ENST00000284384 PRKAG2Q9UGJ0 569 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 SLIT2O94813 1529 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 LRP5O75197 1615 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 SASH1O94885 1247 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 RFX5P48382 616 aaPredicted RBP9.4□□□□□ -0.9
PRKCA-201ENST00000284384 CBX1P83916 185 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 KIAA2012Q0VF49 1180 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 SLC39A6Q13433 755 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 AACSQ86V21 672 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 MTMR14Q8NCE2 650 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 DDX27Q96GQ7 796 aaKnown RBP9.4□□□□□ -0.9
PRKCA-201ENST00000284384 TTC14Q96N46 770 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 LARP6Q9BRS8 491 aaKnown RBP9.4□□□□□ -0.9
PRKCA-201ENST00000284384 SWAP70Q9UH65 585 aa9.4□□□□□ -0.9
PRKCA-201ENST00000284384 ABCC12Q96J65 1359 aa9.4□□□□□ -0.91
PRKCA-201ENST00000284384 RPAP1Q9BWH6 1393 aaPredicted RBP9.4□□□□□ -0.91
PRKCA-201ENST00000284384 BMS1Q14692 1282 aaKnown RBP9.4□□□□□ -0.91
PRKCA-201ENST00000284384 CHRNA2Q15822 529 aa9.4□□□□□ -0.91
PRKCA-201ENST00000284384 PPP4R3BQ5MIZ7 849 aa9.4□□□□□ -0.91
PRKCA-201ENST00000284384 JAZF1Q86VZ6 243 aa9.4□□□□□ -0.91
PRKCA-201ENST00000284384 CCDC191Q8NCU4 936 aa9.4□□□□□ -0.91
PRKCA-201ENST00000284384 MYD88Q99836 296 aa9.4□□□□□ -0.91
PRKCA-201ENST00000284384 ZSWIM4Q9H7M6 989 aa9.4□□□□□ -0.91
PRKCA-201ENST00000284384 SH2B1Q9NRF2 756 aaPredicted RBP9.4□□□□□ -0.91
PRKCA-201ENST00000284384 HMG20BQ9P0W2 317 aa9.4□□□□□ -0.91
PRKCA-201ENST00000284384 PALLDQ8WX93 1383 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 DOT1LQ8TEK3 1739 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 CCDC171Q6TFL3 1326 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 ATP5JP18859 108 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 FECHP22830 423 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 NUBP1P53384 320 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 TSGA10IPQ3SY00 556 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 VPS53Q5VIR6 699 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 PHLDB3Q6NSJ2 640 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 TOM1L2Q6ZVM7 507 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 MYRIPQ8NFW9 859 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 DDX17Q92841 729 aaKnown RBP9.39□□□□□ -0.91
PRKCA-201ENST00000284384 ZSCAN31Q96LW9 406 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms