RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 PRAMEF18Q5VWM3 479 aa11.04□□□□□ -0.64
RPS3A-201ENST00000274065 TMC4Q7Z404 712 aa11.04□□□□□ -0.64
RPS3A-201ENST00000274065 SPRYD3Q8NCJ5 442 aa11.04□□□□□ -0.64
RPS3A-201ENST00000274065 CELF1Q92879 486 aaKnown RBP11.04□□□□□ -0.64
RPS3A-201ENST00000274065 A0A0C4DFX4 3053 aa11.04□□□□□ -0.64
RPS3A-201ENST00000274065 LAMB2P55268 1798 aa11.03□□□□□ -0.64
RPS3A-201ENST00000274065 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
RPS3A-201ENST00000274065 ZNF280AP59817 542 aaPredicted RBP11.03□□□□□ -0.64
RPS3A-201ENST00000274065 PNISRQ8TF01 805 aaKnown RBP11.03□□□□□ -0.64
RPS3A-201ENST00000274065 CFAP53Q96M91 514 aa11.03□□□□□ -0.64
RPS3A-201ENST00000274065 TRMT112Q9UI30 125 aaKnown RBP11.03□□□□□ -0.64
RPS3A-201ENST00000274065 NUDCQ9Y266 331 aa11.03□□□□□ -0.64
RPS3A-201ENST00000274065 COL4A1P02462 1669 aa11.03□□□□□ -0.64
RPS3A-201ENST00000274065 TAF1P21675 1872 aa11.03□□□□□ -0.64
RPS3A-201ENST00000274065 LRRC37AA6NMS7 1700 aa11.03□□□□□ -0.64
RPS3A-201ENST00000274065 ERBB4Q15303 1308 aa11.03□□□□□ -0.64
RPS3A-201ENST00000274065 RANBP2P49792 3224 aaKnown RBP11.02□□□□□ -0.64
RPS3A-201ENST00000274065 TBC1D16Q8TBP0 767 aa11.02□□□□□ -0.65
RPS3A-201ENST00000274065 EPAS1Q99814 870 aa11.02□□□□□ -0.65
RPS3A-201ENST00000274065 NBPF3Q9H094 633 aa11.02□□□□□ -0.65
RPS3A-201ENST00000274065 RTN4Q9NQC3 1192 aaKnown RBP11.02□□□□□ -0.65
RPS3A-201ENST00000274065 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.02□□□□□ -0.65
RPS3A-201ENST00000274065 TRIM17Q9Y577 477 aa11.02□□□□□ -0.65
RPS3A-201ENST00000274065 KDM3BQ7LBC6 1761 aa11.02□□□□□ -0.65
RPS3A-201ENST00000274065 SH3TC1Q8TE82 1336 aa11.02□□□□□ -0.65
RPS3A-201ENST00000274065 ANKRD36CQ5JPF3 1778 aa11.01□□□□□ -0.65
RPS3A-201ENST00000274065 EN2P19622 333 aaPredicted RBP11.01□□□□□ -0.65
RPS3A-201ENST00000274065 EIF2S2P20042 333 aaKnown RBP11.01□□□□□ -0.65
RPS3A-201ENST00000274065 COL9A1P20849 921 aa11.01□□□□□ -0.65
RPS3A-201ENST00000274065 RSBN1LQ6PCB5 846 aaPredicted RBP11.01□□□□□ -0.65
RPS3A-201ENST00000274065 OTOP1Q7RTM1 612 aa11.01□□□□□ -0.65
RPS3A-201ENST00000274065 MRPL50Q8N5N7 158 aaKnown RBP11.01□□□□□ -0.65
RPS3A-201ENST00000274065 EYA3Q99504 573 aa11.01□□□□□ -0.65
RPS3A-201ENST00000274065 CFHR5Q9BXR6 569 aa11.01□□□□□ -0.65
RPS3A-201ENST00000274065 KIAA0100Q14667 2235 aaKnown RBP11.01□□□□□ -0.65
RPS3A-201ENST00000274065 SCN9AQ15858 1988 aa11.01□□□□□ -0.65
RPS3A-201ENST00000274065 SREBF2Q12772 1141 aa11□□□□□ -0.65
RPS3A-201ENST00000274065 AIMP1Q12904 312 aaKnown RBP11□□□□□ -0.65
RPS3A-201ENST00000274065 TCIRG1Q13488 830 aa11□□□□□ -0.65
RPS3A-201ENST00000274065 TTLL12Q14166 644 aaPredicted RBP11□□□□□ -0.65
RPS3A-201ENST00000274065 INTS3Q68E01 1043 aaKnown RBP11□□□□□ -0.65
RPS3A-201ENST00000274065 THSD4Q6ZMP0 1018 aa11□□□□□ -0.65
RPS3A-201ENST00000274065 COPS6Q7L5N1 327 aa11□□□□□ -0.65
RPS3A-201ENST00000274065 GMLQ99445 158 aa11□□□□□ -0.65
RPS3A-201ENST00000274065 MYOZ2Q9NPC6 264 aa11□□□□□ -0.65
RPS3A-201ENST00000274065 TRIOBPQ9H2D6 2365 aa11□□□□□ -0.65
RPS3A-201ENST00000274065 PITPNM2Q9BZ72 1349 aa11□□□□□ -0.65
RPS3A-201ENST00000274065 PTPN12Q05209 780 aaKnown RBP10.99□□□□□ -0.65
RPS3A-201ENST00000274065 SF3B3Q15393 1217 aaKnown RBP10.99□□□□□ -0.65
RPS3A-201ENST00000274065 HSP90AB3PQ58FF7 597 aa10.99□□□□□ -0.65
RPS3A-201ENST00000274065 AGBL3Q8NEM8 1001 aa10.99□□□□□ -0.65
RPS3A-201ENST00000274065 XAGE3Q8WTP9 111 aa10.99□□□□□ -0.65
RPS3A-201ENST00000274065 ZC3H12CQ9C0D7 883 aaKnown RBP10.99□□□□□ -0.65
RPS3A-201ENST00000274065 RABGEF1Q9UJ41 708 aa10.99□□□□□ -0.65
RPS3A-201ENST00000274065 ZNF609O15014 1411 aa10.99□□□□□ -0.65
RPS3A-201ENST00000274065 COL6A3P12111 3177 aa10.98□□□□□ -0.65
RPS3A-201ENST00000274065 DLL1O00548 723 aa10.98□□□□□ -0.65
RPS3A-201ENST00000274065 USP17L8P0C7I0 530 aa10.98□□□□□ -0.65
RPS3A-201ENST00000274065 NBPF9Q3BBW0 867 aa10.98□□□□□ -0.65
RPS3A-201ENST00000274065 NECTIN2Q92692 538 aa10.98□□□□□ -0.65
RPS3A-201ENST00000274065 FAM89AQ96GI7 184 aa10.98□□□□□ -0.65
RPS3A-201ENST00000274065 UFL1O94874 794 aa10.97□□□□□ -0.65
RPS3A-201ENST00000274065 CAP1Q01518 475 aa10.97□□□□□ -0.65
RPS3A-201ENST00000274065 PRKG1Q13976 671 aa10.97□□□□□ -0.65
RPS3A-201ENST00000274065 PROX2Q3B8N5 592 aa10.97□□□□□ -0.65
RPS3A-201ENST00000274065 WNT2BQ93097 391 aa10.97□□□□□ -0.65
RPS3A-201ENST00000274065 ARMC5Q96C12 935 aa10.97□□□□□ -0.65
RPS3A-201ENST00000274065 PODXL2Q9NZ53 605 aa10.97□□□□□ -0.65
RPS3A-201ENST00000274065 PTPN22Q9Y2R2 807 aa10.97□□□□□ -0.65
RPS3A-201ENST00000274065 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
RPS3A-201ENST00000274065 CEP290O15078 2479 aa10.97□□□□□ -0.65
RPS3A-201ENST00000274065 DDX60Q8IY21 1712 aaKnown RBP10.96□□□□□ -0.65
RPS3A-201ENST00000274065 GOLGA8CPA6NN73 597 aa10.96□□□□□ -0.65
RPS3A-201ENST00000274065 PPP2R1AP30153 589 aa10.96□□□□□ -0.65
RPS3A-201ENST00000274065 RPS8P62241 208 aaKnown RBP10.96□□□□□ -0.65
RPS3A-201ENST00000274065 RTL5Q5HYW3 569 aaPredicted RBP10.96□□□□□ -0.65
RPS3A-201ENST00000274065 SPRYD7Q5W111 196 aa10.96□□□□□ -0.65
RPS3A-201ENST00000274065 TSPYL4Q9UJ04 414 aa10.96□□□□□ -0.65
RPS3A-201ENST00000274065 FZD1Q9UP38 647 aa10.96□□□□□ -0.65
RPS3A-201ENST00000274065 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
RPS3A-201ENST00000274065 H0YGN5 161 aa10.95□□□□□ -0.66
RPS3A-201ENST00000274065 IGF2BP3O00425 579 aaKnown RBP eCLIP10.95□□□□□ -0.66
RPS3A-201ENST00000274065 ALDH1A1P00352 501 aa10.95□□□□□ -0.66
RPS3A-201ENST00000274065 PTPN5P54829 565 aa10.95□□□□□ -0.66
RPS3A-201ENST00000274065 C6orf132Q5T0Z8 1188 aa10.95□□□□□ -0.66
RPS3A-201ENST00000274065 LDLRAD1Q5T700 205 aa10.95□□□□□ -0.66
RPS3A-201ENST00000274065 CD99L2Q8TCZ2 262 aa10.95□□□□□ -0.66
RPS3A-201ENST00000274065 MXD3Q9BW11 206 aa10.95□□□□□ -0.66
RPS3A-201ENST00000274065 SEC31BQ9NQW1 1179 aa10.95□□□□□ -0.66
RPS3A-201ENST00000274065 ANKIB1Q9P2G1 1089 aa10.95□□□□□ -0.66
RPS3A-201ENST00000274065 GGA1Q9UJY5 639 aa10.95□□□□□ -0.66
RPS3A-201ENST00000274065 LAMA3Q16787 3333 aa10.94□□□□□ -0.66
RPS3A-201ENST00000274065 USP17L3A6NCW0 530 aa10.94□□□□□ -0.66
RPS3A-201ENST00000274065 USP17L4A6NCW7 530 aa10.94□□□□□ -0.66
RPS3A-201ENST00000274065 WNT10BO00744 389 aa10.94□□□□□ -0.66
RPS3A-201ENST00000274065 NF2P35240 595 aa10.94□□□□□ -0.66
RPS3A-201ENST00000274065 NFE2L2Q16236 605 aa10.94□□□□□ -0.66
RPS3A-201ENST00000274065 USP17L1Q7RTZ2 530 aa10.94□□□□□ -0.66
RPS3A-201ENST00000274065 ARMC9Q7Z3E5 817 aa10.94□□□□□ -0.66
RPS3A-201ENST00000274065 PLEKHF1Q96S99 279 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms