RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 POLD1P28340 1107 aa13.42□□□□□ -0.26
LRTM1-201ENST00000273286 RAPGEF4Q8WZA2 1011 aa13.42□□□□□ -0.26
LRTM1-201ENST00000273286 SYTL4Q96C24 671 aaPredicted RBP13.42□□□□□ -0.26
LRTM1-201ENST00000273286 TRERF1Q96PN7 1200 aa13.42□□□□□ -0.26
LRTM1-201ENST00000273286 LRRC4BQ9NT99 713 aa13.42□□□□□ -0.26
LRTM1-201ENST00000273286 TIMELESSQ9UNS1 1208 aa13.42□□□□□ -0.26
LRTM1-201ENST00000273286 ZNF827Q17R98 1081 aa13.41□□□□□ -0.26
LRTM1-201ENST00000273286 INSRP06213 1382 aa13.41□□□□□ -0.26
LRTM1-201ENST00000273286 UTRNP46939 3433 aa13.41□□□□□ -0.26
LRTM1-201ENST00000273286 A0A1B0GTH6 734 aa13.4□□□□□ -0.26
LRTM1-201ENST00000273286 PIK3CDO00329 1044 aa13.4□□□□□ -0.26
LRTM1-201ENST00000273286 TRIM26Q12899 539 aaPredicted RBP13.4□□□□□ -0.26
LRTM1-201ENST00000273286 C4orf17Q53FE4 359 aa13.4□□□□□ -0.26
LRTM1-201ENST00000273286 WWC1Q8IX03 1113 aa13.4□□□□□ -0.26
LRTM1-201ENST00000273286 TFCP2L1Q9NZI6 479 aa13.4□□□□□ -0.26
LRTM1-201ENST00000273286 FLT4P35916 1363 aa13.4□□□□□ -0.26
LRTM1-201ENST00000273286 DOT1LQ8TEK3 1739 aa13.4□□□□□ -0.26
LRTM1-201ENST00000273286 MEGF6O75095 1541 aa13.4□□□□□ -0.26
LRTM1-201ENST00000273286 TATP17735 454 aaPredicted RBP13.39□□□□□ -0.27
LRTM1-201ENST00000273286 SCNN1DP51172 638 aa13.39□□□□□ -0.27
LRTM1-201ENST00000273286 GDF10P55107 478 aa13.39□□□□□ -0.27
LRTM1-201ENST00000273286 LYPD4Q6UWN0 246 aa13.39□□□□□ -0.27
LRTM1-201ENST00000273286 GGNBP2Q9H3C7 697 aa13.39□□□□□ -0.27
LRTM1-201ENST00000273286 PCDH11XQ9BZA7 1347 aa13.39□□□□□ -0.27
LRTM1-201ENST00000273286 PCDH11YQ9BZA8 1340 aa13.39□□□□□ -0.27
LRTM1-201ENST00000273286 LY75O60449 1722 aa13.39□□□□□ -0.27
LRTM1-201ENST00000273286 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
LRTM1-201ENST00000273286 NBPF6Q5VWK0 638 aa13.39□□□□□ -0.27
LRTM1-201ENST00000273286 RHBDD1Q8TEB9 315 aa13.39□□□□□ -0.27
LRTM1-201ENST00000273286 NBPF4Q96M43 638 aa13.39□□□□□ -0.27
LRTM1-201ENST00000273286 PNPLA7Q6ZV29 1317 aa13.38□□□□□ -0.27
LRTM1-201ENST00000273286 SHANK3Q9BYB0 1731 aa13.38□□□□□ -0.27
LRTM1-201ENST00000273286 KIF20BQ96Q89 1820 aa13.38□□□□□ -0.27
LRTM1-201ENST00000273286 RAD21O60216 631 aa13.38□□□□□ -0.27
LRTM1-201ENST00000273286 ARHGEF15O94989 841 aa13.38□□□□□ -0.27
LRTM1-201ENST00000273286 CCNL1Q9UK58 526 aaPredicted RBP13.38□□□□□ -0.27
LRTM1-201ENST00000273286 CHD4Q14839 1912 aa13.38□□□□□ -0.27
LRTM1-201ENST00000273286 NSD2O96028 1365 aa13.37□□□□□ -0.27
LRTM1-201ENST00000273286 COL24A1Q17RW2 1714 aa13.37□□□□□ -0.27
LRTM1-201ENST00000273286 MAP3K10Q02779 954 aa13.37□□□□□ -0.27
LRTM1-201ENST00000273286 KCNMA1Q12791 1236 aa13.37□□□□□ -0.27
LRTM1-201ENST00000273286 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
LRTM1-201ENST00000273286 RGPD2P0DJD1 1756 aa13.36□□□□□ -0.27
LRTM1-201ENST00000273286 RNF225M0QZC1 329 aaPredicted RBP13.36□□□□□ -0.27
LRTM1-201ENST00000273286 INHAP05111 366 aa13.36□□□□□ -0.27
LRTM1-201ENST00000273286 FBLN1P23142 703 aa13.36□□□□□ -0.27
LRTM1-201ENST00000273286 FLIIQ13045 1269 aa13.36□□□□□ -0.27
LRTM1-201ENST00000273286 FLAD1Q8NFF5 587 aa13.36□□□□□ -0.27
LRTM1-201ENST00000273286 THBS1P07996 1170 aa13.35□□□□□ -0.27
LRTM1-201ENST00000273286 CELA2BP08218 269 aaPredicted RBP13.35□□□□□ -0.27
LRTM1-201ENST00000273286 ALG2Q9H553 416 aa13.35□□□□□ -0.27
LRTM1-201ENST00000273286 SKIP12755 728 aa13.34□□□□□ -0.27
LRTM1-201ENST00000273286 MX2P20592 715 aa13.34□□□□□ -0.27
LRTM1-201ENST00000273286 GPR162Q16538 588 aa13.34□□□□□ -0.27
LRTM1-201ENST00000273286 HSP90AB2PQ58FF8 381 aa13.34□□□□□ -0.27
LRTM1-201ENST00000273286 RUBCNLQ9H714 662 aa13.34□□□□□ -0.27
LRTM1-201ENST00000273286 PLEKHG2Q9H7P9 1386 aa13.33□□□□□ -0.28
LRTM1-201ENST00000273286 MSX1P28360 303 aa13.33□□□□□ -0.28
LRTM1-201ENST00000273286 PGBD3Q8N328 593 aa13.33□□□□□ -0.28
LRTM1-201ENST00000273286 SMARCC1Q92922 1105 aaPredicted RBP13.33□□□□□ -0.28
LRTM1-201ENST00000273286 NSD3Q9BZ95 1437 aa13.33□□□□□ -0.28
LRTM1-201ENST00000273286 PLA2G4AP47712 749 aa13.32□□□□□ -0.28
LRTM1-201ENST00000273286 GSK3AP49840 483 aa13.32□□□□□ -0.28
LRTM1-201ENST00000273286 EML3Q32P44 896 aa13.32□□□□□ -0.28
LRTM1-201ENST00000273286 USHBP1Q8N6Y0 703 aa13.32□□□□□ -0.28
LRTM1-201ENST00000273286 TUBGCP6Q96RT7 1819 aa13.32□□□□□ -0.28
LRTM1-201ENST00000273286 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
LRTM1-201ENST00000273286 MARSP56192 900 aaKnown RBP13.31□□□□□ -0.28
LRTM1-201ENST00000273286 SERTAD1Q9UHV2 236 aa13.31□□□□□ -0.28
LRTM1-201ENST00000273286 SPG7Q9UQ90 795 aa13.31□□□□□ -0.28
LRTM1-201ENST00000273286 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
LRTM1-201ENST00000273286 C5P01031 1676 aa13.31□□□□□ -0.28
LRTM1-201ENST00000273286 PKD1L3Q7Z443 1732 aa13.31□□□□□ -0.28
LRTM1-201ENST00000273286 ANKRD26Q9UPS8 1709 aa13.31□□□□□ -0.28
LRTM1-201ENST00000273286 TMEM229AB2RXF0 380 aa13.3□□□□□ -0.28
LRTM1-201ENST00000273286 GRIN3BO60391 1043 aa13.3□□□□□ -0.28
LRTM1-201ENST00000273286 NSFL1CQ9UNZ2 370 aaKnown RBP13.3□□□□□ -0.28
LRTM1-201ENST00000273286 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
LRTM1-201ENST00000273286 CYP27B1O15528 508 aa13.3□□□□□ -0.28
LRTM1-201ENST00000273286 SMTNP53814 917 aa13.3□□□□□ -0.28
LRTM1-201ENST00000273286 KCNQ4P56696 695 aa13.3□□□□□ -0.28
LRTM1-201ENST00000273286 MPRIPQ6WCQ1 1025 aa13.3□□□□□ -0.28
LRTM1-201ENST00000273286 TBC1D9Q6ZT07 1266 aa13.3□□□□□ -0.28
LRTM1-201ENST00000273286 POM121CA8CG34 1229 aa13.29□□□□□ -0.28
LRTM1-201ENST00000273286 RASSF7Q02833 373 aa13.29□□□□□ -0.28
LRTM1-201ENST00000273286 LBRQ14739 615 aaKnown RBP13.29□□□□□ -0.28
LRTM1-201ENST00000273286 EFHC2Q5JST6 749 aa13.29□□□□□ -0.28
LRTM1-201ENST00000273286 COL23A1Q86Y22 540 aaPredicted RBP13.29□□□□□ -0.28
LRTM1-201ENST00000273286 NFATC2IPQ8NCF5 419 aa13.29□□□□□ -0.28
LRTM1-201ENST00000273286 CFHR5Q9BXR6 569 aa13.29□□□□□ -0.28
LRTM1-201ENST00000273286 NOD1Q9Y239 953 aa13.29□□□□□ -0.28
LRTM1-201ENST00000273286 PCDHGA11Q9Y5H2 935 aa13.29□□□□□ -0.28
LRTM1-201ENST00000273286 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
LRTM1-201ENST00000273286 NCOA4Q13772 614 aa13.28□□□□□ -0.28
LRTM1-201ENST00000273286 ACDQ96AP0 544 aa13.28□□□□□ -0.28
LRTM1-201ENST00000273286 NIFKQ9BYG3 293 aaKnown RBP13.28□□□□□ -0.28
LRTM1-201ENST00000273286 ENAMQ9NRM1 1142 aa13.28□□□□□ -0.28
LRTM1-201ENST00000273286 PHF24Q9UPV7 400 aa13.28□□□□□ -0.28
LRTM1-201ENST00000273286 CD2APQ9Y5K6 639 aa13.28□□□□□ -0.28
LRTM1-201ENST00000273286 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms