RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 BLOC1S2Q6QNY1 142 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 VPS37DQ86XT2 251 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 ZNF532Q9HCE3 1301 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 LAMA4Q16363 1823 aa13.81□□□□□ -0.2
SCAF11-201ENST00000266589 NRXN2Q9P2S2 1712 aa13.8□□□□□ -0.2
SCAF11-201ENST00000266589 KLRK1P26718 216 aa13.8□□□□□ -0.2
SCAF11-201ENST00000266589 MAP3K12Q12852 859 aa13.8□□□□□ -0.2
SCAF11-201ENST00000266589 NLGN1Q8N2Q7 840 aa13.8□□□□□ -0.2
SCAF11-201ENST00000266589 FLAD1Q8NFF5 587 aa13.8□□□□□ -0.2
SCAF11-201ENST00000266589 CWC22Q9HCG8 908 aaKnown RBP13.8□□□□□ -0.2
SCAF11-201ENST00000266589 LIMCH1Q9UPQ0 1083 aa13.8□□□□□ -0.2
SCAF11-201ENST00000266589 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
SCAF11-201ENST00000266589 ANKRD31Q8N7Z5 1873 aa13.8□□□□□ -0.2
SCAF11-201ENST00000266589 TCRBV5S4A2TA0A5A2 114 aa13.79□□□□□ -0.2
SCAF11-201ENST00000266589 COL9A3Q14050 684 aaPredicted RBP13.79□□□□□ -0.2
SCAF11-201ENST00000266589 RAB3GAP1Q15042 981 aa13.79□□□□□ -0.2
SCAF11-201ENST00000266589 FAM84BQ96KN1 310 aaPredicted RBP13.79□□□□□ -0.2
SCAF11-201ENST00000266589 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
SCAF11-201ENST00000266589 FOXP2O15409 715 aa13.79□□□□□ -0.2
SCAF11-201ENST00000266589 RPS6KB1P23443 525 aa13.79□□□□□ -0.2
SCAF11-201ENST00000266589 PNPLA7Q6ZV29 1317 aa13.79□□□□□ -0.2
SCAF11-201ENST00000266589 MAGEB6Q8N7X4 407 aa13.79□□□□□ -0.2
SCAF11-201ENST00000266589 RBM17Q96I25 401 aaKnown RBP13.79□□□□□ -0.2
SCAF11-201ENST00000266589 SLC51AQ86UW1 340 aa13.78□□□□□ -0.2
SCAF11-201ENST00000266589 INTS4Q96HW7 963 aaKnown RBP13.78□□□□□ -0.2
SCAF11-201ENST00000266589 NEK1Q96PY6 1258 aa13.78□□□□□ -0.2
SCAF11-201ENST00000266589 ANKIB1Q9P2G1 1089 aa13.78□□□□□ -0.2
SCAF11-201ENST00000266589 A0A0G2JLW4 131 aa13.78□□□□□ -0.2
SCAF11-201ENST00000266589 TTLL5Q6EMB2 1281 aa13.78□□□□□ -0.2
SCAF11-201ENST00000266589 STOX1Q6ZVD7 989 aa13.78□□□□□ -0.2
SCAF11-201ENST00000266589 FBXO33Q7Z6M2 555 aa13.78□□□□□ -0.2
SCAF11-201ENST00000266589 TCEANC2Q96MN5 208 aa13.78□□□□□ -0.2
SCAF11-201ENST00000266589 LRP2BPQ9P2M1 347 aa13.78□□□□□ -0.2
SCAF11-201ENST00000266589 CTNNA3Q9UI47 895 aa13.78□□□□□ -0.2
SCAF11-201ENST00000266589 DENND2AQ9ULE3 1009 aa13.78□□□□□ -0.2
SCAF11-201ENST00000266589 EZH2Q15910 746 aaKnown RBP13.77□□□□□ -0.21
SCAF11-201ENST00000266589 TNPO1Q92973 898 aaKnown RBP13.77□□□□□ -0.21
SCAF11-201ENST00000266589 AIDAQ96BJ3 306 aa13.77□□□□□ -0.21
SCAF11-201ENST00000266589 XDHP47989 1333 aa13.76□□□□□ -0.21
SCAF11-201ENST00000266589 LARGE1O95461 756 aa13.76□□□□□ -0.21
SCAF11-201ENST00000266589 HIBADHP31937 336 aaKnown RBP13.76□□□□□ -0.21
SCAF11-201ENST00000266589 EN1Q05925 392 aaPredicted RBP13.76□□□□□ -0.21
SCAF11-201ENST00000266589 IMMTQ16891 758 aaKnown RBP13.76□□□□□ -0.21
SCAF11-201ENST00000266589 ABCF2Q9UG63 623 aa13.76□□□□□ -0.21
SCAF11-201ENST00000266589 IRS2Q9Y4H2 1338 aa13.76□□□□□ -0.21
SCAF11-201ENST00000266589 KLRG2A4D1S0 409 aaPredicted RBP13.76□□□□□ -0.21
SCAF11-201ENST00000266589 SEMA3EO15041 775 aa13.76□□□□□ -0.21
SCAF11-201ENST00000266589 FGAP02671 866 aa13.76□□□□□ -0.21
SCAF11-201ENST00000266589 HOXA10P31260 410 aaPredicted RBP13.76□□□□□ -0.21
SCAF11-201ENST00000266589 NUCB2P80303 420 aa13.76□□□□□ -0.21
SCAF11-201ENST00000266589 ANKRD1Q15327 319 aa13.76□□□□□ -0.21
SCAF11-201ENST00000266589 ZSCAN31Q96LW9 406 aaPredicted RBP13.76□□□□□ -0.21
SCAF11-201ENST00000266589 CAMKK2Q96RR4 588 aa13.76□□□□□ -0.21
SCAF11-201ENST00000266589 ALDH8A1Q9H2A2 487 aaPredicted RBP13.76□□□□□ -0.21
SCAF11-201ENST00000266589 SH2B1Q9NRF2 756 aaPredicted RBP13.76□□□□□ -0.21
SCAF11-201ENST00000266589 LEMD3Q9Y2U8 911 aa13.76□□□□□ -0.21
SCAF11-201ENST00000266589 E7EWF7 191 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 MMP10P09238 476 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 PKP1Q13835 747 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 TXNRD3Q86VQ6 643 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
SCAF11-201ENST00000266589 PARP3Q9Y6F1 533 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 LRRC37AA6NMS7 1700 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 QSER1Q2KHR3 1735 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 CACNA1SQ13698 1873 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 MBD4O95243 580 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 HMGB1P09429 215 aaKnown RBP13.75□□□□□ -0.21
SCAF11-201ENST00000266589 HAND2P61296 217 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 GPSM2P81274 684 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 TOB2Q14106 344 aaPredicted RBP13.75□□□□□ -0.21
SCAF11-201ENST00000266589 CRAMP1Q96RY5 1269 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 STRBPQ96SI9 672 aaKnown RBP13.75□□□□□ -0.21
SCAF11-201ENST00000266589 BRIP1Q9BX63 1249 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 RAI14Q9P0K7 980 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 TPCN1Q9ULQ1 816 aa13.75□□□□□ -0.21
SCAF11-201ENST00000266589 COL11A2P13942 1736 aaPredicted RBP13.74□□□□□ -0.21
SCAF11-201ENST00000266589 PDS5AQ29RF7 1337 aaKnown RBP13.74□□□□□ -0.21
SCAF11-201ENST00000266589 BBOX1O75936 387 aa13.74□□□□□ -0.21
SCAF11-201ENST00000266589 APPP05067 770 aa13.74□□□□□ -0.21
SCAF11-201ENST00000266589 MCM4P33991 863 aa13.74□□□□□ -0.21
SCAF11-201ENST00000266589 ME3Q16798 604 aa13.74□□□□□ -0.21
SCAF11-201ENST00000266589 MAST2Q6P0Q8 1798 aa13.74□□□□□ -0.21
SCAF11-201ENST00000266589 SLC15A2Q16348 729 aa13.73□□□□□ -0.21
SCAF11-201ENST00000266589 CCDC83Q8IWF9 413 aa13.73□□□□□ -0.21
SCAF11-201ENST00000266589 ARMT1Q9H993 441 aa13.73□□□□□ -0.21
SCAF11-201ENST00000266589 NSFL1CQ9UNZ2 370 aaKnown RBP13.73□□□□□ -0.21
SCAF11-201ENST00000266589 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.73□□□□□ -0.21
SCAF11-201ENST00000266589 ZNF213O14771 459 aa13.73□□□□□ -0.21
SCAF11-201ENST00000266589 CYP7A1P22680 504 aa13.73□□□□□ -0.21
SCAF11-201ENST00000266589 CHAF1AQ13111 956 aaPredicted RBP13.73□□□□□ -0.21
SCAF11-201ENST00000266589 Q6ZUG5 572 aa13.73□□□□□ -0.21
SCAF11-201ENST00000266589 DHX32Q7L7V1 743 aaKnown RBP13.73□□□□□ -0.21
SCAF11-201ENST00000266589 GBP4Q96PP9 640 aa13.73□□□□□ -0.21
SCAF11-201ENST00000266589 STK32BQ9NY57 414 aa13.73□□□□□ -0.21
SCAF11-201ENST00000266589 LTBP1Q14766 1721 aa13.72□□□□□ -0.21
SCAF11-201ENST00000266589 CCDC88AQ3V6T2 1871 aa13.72□□□□□ -0.21
SCAF11-201ENST00000266589 UFL1O94874 794 aa13.72□□□□□ -0.21
SCAF11-201ENST00000266589 ADGRA1Q86SQ6 560 aa13.72□□□□□ -0.21
SCAF11-201ENST00000266589 LCORLQ8N3X6 602 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms