RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 PROM2Q8N271 834 aa20■□□□□ 0.79
CHKA-201ENST00000265689 ARHGEF1Q92888 912 aaKnown RBP20■□□□□ 0.79
CHKA-201ENST00000265689 DDX24Q9GZR7 859 aaKnown RBP eCLIP20■□□□□ 0.79
CHKA-201ENST00000265689 ZNF652Q9Y2D9 606 aa20■□□□□ 0.79
CHKA-201ENST00000265689 JAK2O60674 1132 aa20■□□□□ 0.79
CHKA-201ENST00000265689 HAND2P61296 217 aa20■□□□□ 0.79
CHKA-201ENST00000265689 SLC9C2Q5TAH2 1124 aa20■□□□□ 0.79
CHKA-201ENST00000265689 TMEM87AQ8NBN3 555 aa20■□□□□ 0.79
CHKA-201ENST00000265689 ATP6V1DQ9Y5K8 247 aa20■□□□□ 0.79
CHKA-201ENST00000265689 LAMA4Q16363 1823 aa20■□□□□ 0.79
CHKA-201ENST00000265689 DDX60Q8IY21 1712 aaKnown RBP19.99■□□□□ 0.79
CHKA-201ENST00000265689 GPAA1O43292 621 aa19.99■□□□□ 0.79
CHKA-201ENST00000265689 IDH1O75874 414 aaKnown RBP19.99■□□□□ 0.79
CHKA-201ENST00000265689 ADD2P35612 726 aa19.99■□□□□ 0.79
CHKA-201ENST00000265689 DNM1Q05193 864 aaKnown RBP19.99■□□□□ 0.79
CHKA-201ENST00000265689 CDC37L1Q7L3B6 337 aa19.99■□□□□ 0.79
CHKA-201ENST00000265689 CHST3Q7LGC8 479 aa19.99■□□□□ 0.79
CHKA-201ENST00000265689 FGAP02671 866 aa19.99■□□□□ 0.79
CHKA-201ENST00000265689 SLC5A1P13866 664 aa19.99■□□□□ 0.79
CHKA-201ENST00000265689 RBM6P78332 1123 aaKnown RBP19.99■□□□□ 0.79
CHKA-201ENST00000265689 TPRNQ4KMQ1 711 aa19.99■□□□□ 0.79
CHKA-201ENST00000265689 SYCE3A1L190 88 aa19.98■□□□□ 0.79
CHKA-201ENST00000265689 FIBPO43427 364 aa19.98■□□□□ 0.79
CHKA-201ENST00000265689 UQCRFS1P1P0C7P4 283 aa19.98■□□□□ 0.79
CHKA-201ENST00000265689 APOBRQ0VD83 1088 aa19.98■□□□□ 0.79
CHKA-201ENST00000265689 TTF1Q15361 905 aaPredicted RBP19.98■□□□□ 0.79
CHKA-201ENST00000265689 ERFEQ4G0M1 354 aa19.98■□□□□ 0.79
CHKA-201ENST00000265689 FERMT3Q86UX7 667 aa19.98■□□□□ 0.79
CHKA-201ENST00000265689 CTNNA3Q9UI47 895 aa19.98■□□□□ 0.79
CHKA-201ENST00000265689 C4BP0C0L5 1744 aa19.97■□□□□ 0.79
CHKA-201ENST00000265689 WTIPA6NIX2 430 aaPredicted RBP19.97■□□□□ 0.79
CHKA-201ENST00000265689 PDCP20941 246 aa19.97■□□□□ 0.79
CHKA-201ENST00000265689 IGHMBP2P38935 993 aaKnown RBP19.97■□□□□ 0.79
CHKA-201ENST00000265689 SCRN1Q12765 414 aa19.97■□□□□ 0.79
CHKA-201ENST00000265689 CLEC4GQ6UXB4 293 aa19.97■□□□□ 0.79
CHKA-201ENST00000265689 CNTNAP4Q9C0A0 1308 aa19.97■□□□□ 0.79
CHKA-201ENST00000265689 ZSCAN25Q6NSZ9 544 aa19.97■□□□□ 0.79
CHKA-201ENST00000265689 RTCBQ9Y3I0 505 aaKnown RBP19.97■□□□□ 0.79
CHKA-201ENST00000265689 IMMTQ16891 758 aaKnown RBP19.96■□□□□ 0.79
CHKA-201ENST00000265689 WWC3Q9ULE0 1092 aa19.96■□□□□ 0.79
CHKA-201ENST00000265689 BCORQ6W2J9 1755 aa19.96■□□□□ 0.79
CHKA-201ENST00000265689 MYH7P12883 1935 aa19.96■□□□□ 0.79
CHKA-201ENST00000265689 ZNF532Q9HCE3 1301 aa19.96■□□□□ 0.79
CHKA-201ENST00000265689 RPS6KA4O75676 772 aa19.96■□□□□ 0.79
CHKA-201ENST00000265689 ZNF772Q68DY9 489 aaPredicted RBP19.96■□□□□ 0.79
CHKA-201ENST00000265689 AGXT2Q9BYV1 514 aa19.96■□□□□ 0.79
CHKA-201ENST00000265689 RTL9Q8NET4 1388 aa19.95■□□□□ 0.78
CHKA-201ENST00000265689 PFKFB2O60825 505 aa19.95■□□□□ 0.78
CHKA-201ENST00000265689 PDE6AP16499 860 aa19.95■□□□□ 0.78
CHKA-201ENST00000265689 RASGRF1Q13972 1273 aa19.95■□□□□ 0.78
CHKA-201ENST00000265689 SPATA5Q8NB90 893 aa19.95■□□□□ 0.78
CHKA-201ENST00000265689 DDX11Q96FC9 970 aa19.95■□□□□ 0.78
CHKA-201ENST00000265689 RBSNQ9H1K0 784 aa19.95■□□□□ 0.78
CHKA-201ENST00000265689 MYO5AQ9Y4I1 1855 aaKnown RBP19.95■□□□□ 0.78
CHKA-201ENST00000265689 C4AP0C0L4 1744 aa19.95■□□□□ 0.78
CHKA-201ENST00000265689 RXRBP28702 533 aa19.95■□□□□ 0.78
CHKA-201ENST00000265689 NASPP49321 788 aaPredicted RBP19.95■□□□□ 0.78
CHKA-201ENST00000265689 FAM173BQ6P4H8 233 aa19.95■□□□□ 0.78
CHKA-201ENST00000265689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.94■□□□□ 0.78
CHKA-201ENST00000265689 BCAMP50895 628 aa19.94■□□□□ 0.78
CHKA-201ENST00000265689 CHRNDQ07001 517 aa19.94■□□□□ 0.78
CHKA-201ENST00000265689 UBE3CQ15386 1083 aa19.94■□□□□ 0.78
CHKA-201ENST00000265689 GPHNQ9NQX3 736 aaPredicted RBP19.94■□□□□ 0.78
CHKA-201ENST00000265689 LRSAM1Q6UWE0 723 aa19.94■□□□□ 0.78
CHKA-201ENST00000265689 NAP1L2Q9ULW6 460 aaPredicted RBP19.94■□□□□ 0.78
CHKA-201ENST00000265689 TCRBV5S4A2TA0A5A2 114 aa19.93■□□□□ 0.78
CHKA-201ENST00000265689 PDIA4P13667 645 aaKnown RBP19.93■□□□□ 0.78
CHKA-201ENST00000265689 CCT2P78371 535 aaKnown RBP19.93■□□□□ 0.78
CHKA-201ENST00000265689 CASZ1Q86V15 1759 aa19.93■□□□□ 0.78
CHKA-201ENST00000265689 ARAP2Q8WZ64 1704 aa19.93■□□□□ 0.78
CHKA-201ENST00000265689 ZNF831Q5JPB2 1677 aa19.93■□□□□ 0.78
CHKA-201ENST00000265689 ZPR1O75312 459 aa19.93■□□□□ 0.78
CHKA-201ENST00000265689 UBE2HP62256 183 aa19.93■□□□□ 0.78
CHKA-201ENST00000265689 APBA3O96018 575 aa19.92■□□□□ 0.78
CHKA-201ENST00000265689 NCOA5Q9HCD5 579 aaKnown RBP19.92■□□□□ 0.78
CHKA-201ENST00000265689 LAMB2P55268 1798 aa19.92■□□□□ 0.78
CHKA-201ENST00000265689 ZNF213O14771 459 aa19.92■□□□□ 0.78
CHKA-201ENST00000265689 CTDNEP1O95476 244 aa19.92■□□□□ 0.78
CHKA-201ENST00000265689 TXNRD1Q16881 649 aa19.92■□□□□ 0.78
CHKA-201ENST00000265689 SMARCC2Q8TAQ2 1214 aa19.92■□□□□ 0.78
CHKA-201ENST00000265689 SYAP1Q96A49 352 aaPredicted RBP19.92■□□□□ 0.78
CHKA-201ENST00000265689 NARFQ9UHQ1 456 aa19.92■□□□□ 0.78
CHKA-201ENST00000265689 PDIA3P30101 505 aaKnown RBP19.91■□□□□ 0.78
CHKA-201ENST00000265689 RFC4P35249 363 aa19.91■□□□□ 0.78
CHKA-201ENST00000265689 NSUN7Q8NE18 718 aaKnown RBP19.91■□□□□ 0.78
CHKA-201ENST00000265689 CDC5LQ99459 802 aaKnown RBP19.91■□□□□ 0.78
CHKA-201ENST00000265689 APPP05067 770 aa19.91■□□□□ 0.78
CHKA-201ENST00000265689 LLPHQ9BRT6 129 aaKnown RBP19.91■□□□□ 0.78
CHKA-201ENST00000265689 PPFIA3O75145 1194 aa19.9■□□□□ 0.78
CHKA-201ENST00000265689 GTF2E1P29083 439 aaPredicted RBP19.9■□□□□ 0.78
CHKA-201ENST00000265689 MB21D2Q8IYB1 491 aaPredicted RBP19.9■□□□□ 0.78
CHKA-201ENST00000265689 MAGEB6Q8N7X4 407 aa19.9■□□□□ 0.78
CHKA-201ENST00000265689 NBPF3Q9H094 633 aa19.9■□□□□ 0.78
CHKA-201ENST00000265689 SCN7AQ01118 1682 aa19.9■□□□□ 0.78
CHKA-201ENST00000265689 PRC1O43663 620 aa19.9■□□□□ 0.78
CHKA-201ENST00000265689 SF3B3Q15393 1217 aaKnown RBP19.9■□□□□ 0.78
CHKA-201ENST00000265689 ZNF827Q17R98 1081 aa19.9■□□□□ 0.78
CHKA-201ENST00000265689 TRAPPC3LQ5T215 181 aa19.9■□□□□ 0.78
CHKA-201ENST00000265689 FAM184AQ8NB25 1140 aa19.9■□□□□ 0.78
CHKA-201ENST00000265689 ZNF274Q96GC6 653 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms