RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 REXO1L1PQ8IX06 675 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 FBXL16Q8N461 479 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 IP6K1Q92551 441 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 ERCC4Q92889 916 aaPredicted RBP14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 FPGT-TNNI3KV9GXZ4 949 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 OVOS2A0A0G2JMS6 1433 aa14.31□□□□□ -0.12
CHMP2B-201ENST00000263780 VGLL3A8MV65 326 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 TBC1D8O95759 1140 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 MYL5Q02045 173 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 ZNF530Q6P9A1 599 aaPredicted RBP14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 USHBP1Q8N6Y0 703 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 ABCC6O95255 1503 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 LMOD1P29536 600 aaPredicted RBP14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 MAP3K9P80192 1104 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 GUCY1B3Q02153 619 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 STOX1Q6ZVD7 989 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 ABTB2Q8N961 1025 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 KBTBD3Q8NAB2 608 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 GOLGA5Q8TBA6 731 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 SYTL4Q96C24 671 aaPredicted RBP14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 EDC3Q96F86 508 aaKnown RBP14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 C8orf76Q96K31 380 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 UTP14AQ9BVJ6 771 aaKnown RBP14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 RASSF4Q9H2L5 321 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 EFCC1Q9HA90 598 aa14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 DBNLQ9UJU6 430 aaKnown RBP14.3□□□□□ -0.12
CHMP2B-201ENST00000263780 TNNT3P45378 269 aaPredicted RBP14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 ZSCAN26Q16670 478 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 CFAP100Q494V2 611 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 OLFM4Q6UX06 510 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 CCDC129Q6ZRS4 1044 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 RIC3Q7Z5B4 369 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 VSTM4Q8IW00 320 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 BIN1O00499 593 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 PPP2R3AQ06190 1150 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 BRD3Q15059 726 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 PROSER3Q2NL68 480 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 JMYQ8N9B5 988 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 GOLGA1Q92805 767 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 PPP2R2CQ9Y2T4 447 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 HEG1Q9ULI3 1381 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 POTEB2H3BUK9 544 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 RNMTO43148 476 aaKnown RBP14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 GNL2Q13823 731 aaKnown RBP14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 ANKRD24Q8TF21 1146 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 SMARCE1Q969G3 411 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 TUBE1Q9UJT0 475 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 AMOTL2Q9Y2J4 779 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 CLIC4Q9Y696 253 aa14.29□□□□□ -0.12
CHMP2B-201ENST00000263780 SEC31AO94979 1220 aaKnown RBP14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 MYSM1Q5VVJ2 828 aa14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 RSRC2Q7L4I2 434 aaKnown RBP14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 NCOA5Q9HCD5 579 aaKnown RBP14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 CCDC151A5D8V7 595 aa14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 E7EWF7 191 aa14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 STX10O60499 249 aa14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 GNG11P61952 73 aa14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 TUBB2AQ13885 445 aa14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 ANO1Q5XXA6 986 aa14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 CTR9Q6PD62 1173 aa14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 FBXO18Q8NFZ0 1043 aa14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 TUBB2BQ9BVA1 445 aa14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 MRFAP1Q9Y605 127 aa14.28□□□□□ -0.12
CHMP2B-201ENST00000263780 IVLP07476 585 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 PFKFB1P16118 471 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 TFCP2Q12800 502 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 SEC62Q99442 399 aaKnown RBP14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 EID1Q9Y6B2 187 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 PALLDQ8WX93 1383 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 NEDD4P46934 1319 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 VWA3AA6NCI4 1184 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 NEURL1BA8MQ27 555 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 TXLNAP40222 546 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 SYKP43405 635 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 ST5P78524 1137 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 GCKRQ14397 625 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 MPRIPQ6WCQ1 1025 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 MSL3Q8N5Y2 521 aaKnown RBP14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 IQUBQ8NA54 791 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 CCDC191Q8NCU4 936 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 TRERF1Q96PN7 1200 aa14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 BAG1Q99933 345 aaPredicted RBP14.27□□□□□ -0.13
CHMP2B-201ENST00000263780 USP54Q70EL1 1684 aa14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 SASH3O75995 380 aa14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 IGKV5-2P06315 115 aa14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 FDPSP14324 419 aaKnown RBP14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 NOM1Q5C9Z4 860 aaKnown RBP14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 NBPF6Q5VWK0 638 aa14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 GOLGA6L1Q8N7Z2 621 aa14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 NBPF4Q96M43 638 aa14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 FUT8Q9BYC5 575 aa14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 PARD6BQ9BYG5 372 aa14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 POLR3DP05423 398 aaPredicted RBP14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 AIMP1Q12904 312 aaKnown RBP14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 SLC39A14Q15043 492 aa14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 KLHDC4Q8TBB5 520 aa14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 HOOK1Q9UJC3 728 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms