RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SEC24BO95487 1268 aa11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 SLFNL1Q499Z3 407 aa11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 DALRD3Q5D0E6 543 aaKnown RBP11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 TBC1D9Q6ZT07 1266 aa11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 PAG1Q9NWQ8 432 aa11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 BCS1LQ9Y276 419 aa11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 CHD4Q14839 1912 aa11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 CYP2E1P05181 493 aaPredicted RBP11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 UQCRFS1P1P0C7P4 283 aa11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 CNTROBQ8N137 903 aa11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 SPATA5Q8NB90 893 aa11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 ZNF512BQ96KM6 892 aaPredicted RBP11.84□□□□□ -0.51
SNRNP40-201ENST00000263694 MYH13Q9UKX3 1938 aa11.83□□□□□ -0.52
SNRNP40-201ENST00000263694 COL1A1P02452 1464 aaPredicted RBP11.83□□□□□ -0.52
SNRNP40-201ENST00000263694 SNED1Q8TER0 1413 aa11.83□□□□□ -0.52
SNRNP40-201ENST00000263694 CDC45O75419 566 aa11.83□□□□□ -0.52
SNRNP40-201ENST00000263694 CHAF1AQ13111 956 aaPredicted RBP11.83□□□□□ -0.52
SNRNP40-201ENST00000263694 C15orf52Q6ZUT6 534 aaKnown RBP11.83□□□□□ -0.52
SNRNP40-201ENST00000263694 EVI5LQ96CN4 794 aa11.83□□□□□ -0.52
SNRNP40-201ENST00000263694 FSD1Q9BTV5 496 aa11.83□□□□□ -0.52
SNRNP40-201ENST00000263694 BACH2Q9BYV9 841 aa11.83□□□□□ -0.52
SNRNP40-201ENST00000263694 PIH1D3Q9NQM4 214 aaKnown RBP11.83□□□□□ -0.52
SNRNP40-201ENST00000263694 FRAT2O75474 233 aaPredicted RBP11.82□□□□□ -0.52
SNRNP40-201ENST00000263694 CHMLP26374 656 aa11.82□□□□□ -0.52
SNRNP40-201ENST00000263694 WASHC4Q2M389 1173 aa11.82□□□□□ -0.52
SNRNP40-201ENST00000263694 CCDC93Q567U6 631 aa11.82□□□□□ -0.52
SNRNP40-201ENST00000263694 ZNF804AQ7Z570 1209 aa11.82□□□□□ -0.52
SNRNP40-201ENST00000263694 SYT17Q9BSW7 474 aa11.82□□□□□ -0.52
SNRNP40-201ENST00000263694 ZC3H12CQ9C0D7 883 aaKnown RBP11.82□□□□□ -0.52
SNRNP40-201ENST00000263694 CD209Q9NNX6 404 aa11.82□□□□□ -0.52
SNRNP40-201ENST00000263694 GNL3LQ9NVN8 582 aaKnown RBP11.82□□□□□ -0.52
SNRNP40-201ENST00000263694 MED23Q9ULK4 1368 aa11.82□□□□□ -0.52
SNRNP40-201ENST00000263694 GABBR2O75899 941 aa11.81□□□□□ -0.52
SNRNP40-201ENST00000263694 AOC3Q16853 763 aa11.81□□□□□ -0.52
SNRNP40-201ENST00000263694 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
SNRNP40-201ENST00000263694 TDRD7Q8NHU6 1098 aaKnown RBP11.81□□□□□ -0.52
SNRNP40-201ENST00000263694 IL25Q9H293 177 aa11.81□□□□□ -0.52
SNRNP40-201ENST00000263694 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
SNRNP40-201ENST00000263694 KBTBD3Q8NAB2 608 aa11.8□□□□□ -0.52
SNRNP40-201ENST00000263694 FAM227BQ96M60 508 aa11.8□□□□□ -0.52
SNRNP40-201ENST00000263694 RTFDC1Q9BY42 306 aaPredicted RBP11.8□□□□□ -0.52
SNRNP40-201ENST00000263694 DBNDD1Q9H9R9 158 aa11.8□□□□□ -0.52
SNRNP40-201ENST00000263694 KCNQ5Q9NR82 932 aa11.8□□□□□ -0.52
SNRNP40-201ENST00000263694 ZNF277Q9NRM2 450 aaPredicted RBP11.8□□□□□ -0.52
SNRNP40-201ENST00000263694 SRCAPQ6ZRS2 3230 aa11.8□□□□□ -0.52
SNRNP40-201ENST00000263694 FER1L6Q2WGJ9 1857 aa11.8□□□□□ -0.52
SNRNP40-201ENST00000263694 IDH1O75874 414 aaKnown RBP11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 NMIQ13287 307 aaPredicted RBP11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 LHX8Q68G74 356 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 CWC27Q6UX04 472 aaKnown RBP11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 RTKN2Q8IZC4 609 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 SEC62Q99442 399 aaKnown RBP11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 EYA3Q99504 573 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 DENND2AQ9ULE3 1009 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 MYH7P12883 1935 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 G3V3G9 751 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 IL1R1P14778 569 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 GRIK5Q16478 980 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 FBXW7Q969H0 707 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 COA1Q9GZY4 146 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 ABCF2Q9UG63 623 aa11.79□□□□□ -0.52
SNRNP40-201ENST00000263694 SCN9AQ15858 1988 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 ARFGEF1Q9Y6D6 1849 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 A0A0D9SFI3 127 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 NFKBIEO00221 500 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 PPIP5K2O43314 1243 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 MFAP1P55081 439 aaKnown RBP11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 GTF2IP78347 998 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 RASSF7Q02833 373 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 KIAA2012Q0VF49 1180 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 PSMD1Q99460 953 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 ESYT1Q9BSJ8 1104 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 MXD3Q9BW11 206 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 DIAPH3Q9NSV4 1193 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 LRP2BPQ9P2M1 347 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 COL4A5P29400 1685 aa11.78□□□□□ -0.52
SNRNP40-201ENST00000263694 DOCK2Q92608 1830 aa11.77□□□□□ -0.52
SNRNP40-201ENST00000263694 CCDC88AQ3V6T2 1871 aa11.77□□□□□ -0.52
SNRNP40-201ENST00000263694 SEMA3EO15041 775 aa11.77□□□□□ -0.53
SNRNP40-201ENST00000263694 RNF113AO15541 343 aaKnown RBP11.77□□□□□ -0.53
SNRNP40-201ENST00000263694 ECE2O60344 883 aa11.77□□□□□ -0.53
SNRNP40-201ENST00000263694 PRELPP51888 382 aa11.77□□□□□ -0.53
SNRNP40-201ENST00000263694 TTF1Q15361 905 aaPredicted RBP11.77□□□□□ -0.53
SNRNP40-201ENST00000263694 SLC9C2Q5TAH2 1124 aa11.77□□□□□ -0.53
SNRNP40-201ENST00000263694 SOGA3Q5TF21 947 aa11.77□□□□□ -0.53
SNRNP40-201ENST00000263694 CCDC129Q6ZRS4 1044 aa11.77□□□□□ -0.53
SNRNP40-201ENST00000263694 SUPT20HQ8NEM7 779 aa11.77□□□□□ -0.53
SNRNP40-201ENST00000263694 YDJCA8MPS7 323 aa11.76□□□□□ -0.53
SNRNP40-201ENST00000263694 PRDX5P30044 214 aa11.76□□□□□ -0.53
SNRNP40-201ENST00000263694 GRIPAP1Q4V328 841 aa11.76□□□□□ -0.53
SNRNP40-201ENST00000263694 CASC1Q6TDU7 716 aa11.76□□□□□ -0.53
SNRNP40-201ENST00000263694 LARGE2Q8N3Y3 721 aa11.76□□□□□ -0.53
SNRNP40-201ENST00000263694 MAGEB6Q8N7X4 407 aa11.76□□□□□ -0.53
SNRNP40-201ENST00000263694 TSHZ2Q9NRE2 1034 aa11.76□□□□□ -0.53
SNRNP40-201ENST00000263694 RAI14Q9P0K7 980 aa11.76□□□□□ -0.53
SNRNP40-201ENST00000263694 ZNF532Q9HCE3 1301 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 M0R2C6 588 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms