RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 SPATA5Q8NB90 893 aa29.72■■■□□ 2.35
SCN1B-201ENST00000262631 EDC3Q96F86 508 aaKnown RBP29.72■■■□□ 2.35
SCN1B-201ENST00000262631 HAUS7Q99871 368 aa29.72■■■□□ 2.35
SCN1B-201ENST00000262631 ZAP70P43403 619 aa29.72■■■□□ 2.35
SCN1B-201ENST00000262631 DNAJC2Q99543 621 aaKnown RBP29.72■■■□□ 2.35
SCN1B-201ENST00000262631 YDJCA8MPS7 323 aa29.71■■■□□ 2.35
SCN1B-201ENST00000262631 PODNQ7Z5L7 613 aa29.71■■■□□ 2.35
SCN1B-201ENST00000262631 DENND2AQ9ULE3 1009 aa29.7■■■□□ 2.35
SCN1B-201ENST00000262631 SEMA3EO15041 775 aa29.69■■■□□ 2.34
SCN1B-201ENST00000262631 GRIN3BO60391 1043 aa29.69■■■□□ 2.34
SCN1B-201ENST00000262631 LMNB1P20700 586 aa29.69■■■□□ 2.34
SCN1B-201ENST00000262631 CHAF1AQ13111 956 aaPredicted RBP29.69■■■□□ 2.34
SCN1B-201ENST00000262631 ANTXR1Q9H6X2 564 aa29.69■■■□□ 2.34
SCN1B-201ENST00000262631 AKAP11Q9UKA4 1901 aa29.69■■■□□ 2.34
SCN1B-201ENST00000262631 ZBTB22O15209 634 aa29.69■■■□□ 2.34
SCN1B-201ENST00000262631 NIM1KQ8IY84 436 aa29.69■■■□□ 2.34
SCN1B-201ENST00000262631 CHD4Q14839 1912 aa29.68■■■□□ 2.34
SCN1B-201ENST00000262631 CYP2E1P05181 493 aaPredicted RBP29.68■■■□□ 2.34
SCN1B-201ENST00000262631 GOLIM4O00461 696 aa29.67■■■□□ 2.34
SCN1B-201ENST00000262631 GTF2IP78347 998 aa29.67■■■□□ 2.34
SCN1B-201ENST00000262631 ZNRF3Q9ULT6 936 aa29.67■■■□□ 2.34
SCN1B-201ENST00000262631 TBC1D9Q6ZT07 1266 aa29.66■■■□□ 2.34
SCN1B-201ENST00000262631 JDP2Q8WYK2 163 aa29.66■■■□□ 2.34
SCN1B-201ENST00000262631 PAG1Q9NWQ8 432 aa29.66■■■□□ 2.34
SCN1B-201ENST00000262631 SCN9AQ15858 1988 aa29.65■■■□□ 2.34
SCN1B-201ENST00000262631 PDS5AQ29RF7 1337 aaKnown RBP29.65■■■□□ 2.34
SCN1B-201ENST00000262631 FAM205AQ6ZU69 1335 aa29.64■■■□□ 2.34
SCN1B-201ENST00000262631 TTLL5Q6EMB2 1281 aa29.64■■■□□ 2.34
SCN1B-201ENST00000262631 FBXW7Q969H0 707 aa29.64■■■□□ 2.34
SCN1B-201ENST00000262631 PIH1D3Q9NQM4 214 aaKnown RBP29.64■■■□□ 2.34
SCN1B-201ENST00000262631 TRIM6-TRIM34B2RNG4 842 aa29.63■■■□□ 2.33
SCN1B-201ENST00000262631 RAD17O75943 681 aa29.63■■■□□ 2.33
SCN1B-201ENST00000262631 SDSP20132 328 aa29.63■■■□□ 2.33
SCN1B-201ENST00000262631 BMP2KLQ5H9B9 411 aa29.63■■■□□ 2.33
SCN1B-201ENST00000262631 MXD3Q9BW11 206 aa29.63■■■□□ 2.33
SCN1B-201ENST00000262631 SBF1O95248 1867 aa29.63■■■□□ 2.33
SCN1B-201ENST00000262631 RNF181Q9P0P0 153 aa29.63■■■□□ 2.33
SCN1B-201ENST00000262631 C9orf131Q5VYM1 1079 aa29.62■■■□□ 2.33
SCN1B-201ENST00000262631 RILPL2Q969X0 211 aa29.62■■■□□ 2.33
SCN1B-201ENST00000262631 CCDC88AQ3V6T2 1871 aa29.61■■■□□ 2.33
SCN1B-201ENST00000262631 USP17L3A6NCW0 530 aa29.61■■■□□ 2.33
SCN1B-201ENST00000262631 USP17L4A6NCW7 530 aa29.61■■■□□ 2.33
SCN1B-201ENST00000262631 GRIK5Q16478 980 aa29.61■■■□□ 2.33
SCN1B-201ENST00000262631 USP17L1Q7RTZ2 530 aa29.61■■■□□ 2.33
SCN1B-201ENST00000262631 WDR66Q8TBY9 1149 aa29.61■■■□□ 2.33
SCN1B-201ENST00000262631 ABCF2Q9UG63 623 aa29.61■■■□□ 2.33
SCN1B-201ENST00000262631 MYH13Q9UKX3 1938 aa29.6■■■□□ 2.33
SCN1B-201ENST00000262631 FZD9O00144 591 aa29.6■■■□□ 2.33
SCN1B-201ENST00000262631 CXCL9Q07325 125 aa29.6■■■□□ 2.33
SCN1B-201ENST00000262631 MFSD14BQ5SR56 506 aa29.6■■■□□ 2.33
SCN1B-201ENST00000262631 DACT2Q5SW24 774 aa29.6■■■□□ 2.33
SCN1B-201ENST00000262631 STRIP1Q5VSL9 837 aa29.6■■■□□ 2.33
SCN1B-201ENST00000262631 CERS5Q8N5B7 392 aa29.6■■■□□ 2.33
SCN1B-201ENST00000262631 EVI5LQ96CN4 794 aa29.6■■■□□ 2.33
SCN1B-201ENST00000262631 SALL1Q9NSC2 1324 aa29.59■■■□□ 2.33
SCN1B-201ENST00000262631 PSMD14O00487 310 aa29.59■■■□□ 2.33
SCN1B-201ENST00000262631 PRDX5P30044 214 aa29.58■■■□□ 2.33
SCN1B-201ENST00000262631 CNTROBQ8N137 903 aa29.58■■■□□ 2.33
SCN1B-201ENST00000262631 KBTBD3Q8NAB2 608 aa29.58■■■□□ 2.33
SCN1B-201ENST00000262631 CHGBP05060 677 aa29.57■■■□□ 2.32
SCN1B-201ENST00000262631 TTF1Q15361 905 aaPredicted RBP29.57■■■□□ 2.32
SCN1B-201ENST00000262631 ZNF541Q9H0D2 1346 aa29.57■■■□□ 2.32
SCN1B-201ENST00000262631 ZNF646O15015 1829 aaPredicted RBP29.57■■■□□ 2.32
SCN1B-201ENST00000262631 IDH1O75874 414 aaKnown RBP29.56■■■□□ 2.32
SCN1B-201ENST00000262631 VIL1P09327 827 aaKnown RBP29.56■■■□□ 2.32
SCN1B-201ENST00000262631 TBC1D22AQ8WUA7 517 aa29.56■■■□□ 2.32
SCN1B-201ENST00000262631 FSD1Q9BTV5 496 aa29.56■■■□□ 2.32
SCN1B-201ENST00000262631 LRP2BPQ9P2M1 347 aa29.56■■■□□ 2.32
SCN1B-201ENST00000262631 CIAPIN1Q6FI81 312 aa29.55■■■□□ 2.32
SCN1B-201ENST00000262631 DICER1Q9UPY3 1922 aaKnown RBP29.55■■■□□ 2.32
SCN1B-201ENST00000262631 SLFNL1Q499Z3 407 aa29.54■■■□□ 2.32
SCN1B-201ENST00000262631 ZBTB12Q9Y330 459 aaPredicted RBP29.54■■■□□ 2.32
SCN1B-201ENST00000262631 EIF6P56537 245 aaKnown RBP29.53■■■□□ 2.32
SCN1B-201ENST00000262631 ZGPATQ8N5A5 531 aaKnown RBP29.53■■■□□ 2.32
SCN1B-201ENST00000262631 ZNF384Q8TF68 577 aa29.53■■■□□ 2.32
SCN1B-201ENST00000262631 RSBN1LQ6PCB5 846 aaPredicted RBP29.53■■■□□ 2.32
SCN1B-201ENST00000262631 RAI14Q9P0K7 980 aa29.53■■■□□ 2.32
SCN1B-201ENST00000262631 MYO5AQ9Y4I1 1855 aaKnown RBP29.52■■■□□ 2.32
SCN1B-201ENST00000262631 PSME4Q14997 1843 aa29.52■■■□□ 2.32
SCN1B-201ENST00000262631 LDHBP07195 334 aaKnown RBP29.52■■■□□ 2.32
SCN1B-201ENST00000262631 FKBP1AP62942 108 aaKnown RBP29.52■■■□□ 2.32
SCN1B-201ENST00000262631 ERICH6Q7L0X2 663 aa29.52■■■□□ 2.32
SCN1B-201ENST00000262631 TIAM2Q8IVF5 1701 aa29.52■■■□□ 2.32
SCN1B-201ENST00000262631 F8W031 263 aaPredicted RBP29.5■■■□□ 2.31
SCN1B-201ENST00000262631 MECOMQ03112 1051 aa29.5■■■□□ 2.31
SCN1B-201ENST00000262631 TNIP1Q15025 636 aa29.5■■■□□ 2.31
SCN1B-201ENST00000262631 GMLQ99445 158 aa29.5■■■□□ 2.31
SCN1B-201ENST00000262631 DOCK2Q92608 1830 aa29.5■■■□□ 2.31
SCN1B-201ENST00000262631 DCAF8L1A6NGE4 600 aa29.5■■■□□ 2.31
SCN1B-201ENST00000262631 MAP3K12Q12852 859 aa29.5■■■□□ 2.31
SCN1B-201ENST00000262631 SLC9C2Q5TAH2 1124 aa29.5■■■□□ 2.31
SCN1B-201ENST00000262631 SPTY2D1Q68D10 685 aaPredicted RBP29.5■■■□□ 2.31
SCN1B-201ENST00000262631 KIAA0825Q8IV33 1275 aa29.5■■■□□ 2.31
SCN1B-201ENST00000262631 NSUN4Q96CB9 384 aaKnown RBP29.5■■■□□ 2.31
SCN1B-201ENST00000262631 GJA3Q9Y6H8 435 aa29.5■■■□□ 2.31
SCN1B-201ENST00000262631 PDE6AP16499 860 aa29.49■■■□□ 2.31
SCN1B-201ENST00000262631 MAGEB6Q8N7X4 407 aa29.49■■■□□ 2.31
SCN1B-201ENST00000262631 DZIP1Q86YF9 867 aaKnown RBP29.48■■■□□ 2.31
SCN1B-201ENST00000262631 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.48■■■□□ 2.31
SCN1B-201ENST00000262631 SUGT1Q9Y2Z0 365 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms