RNA–Protein interactions for RNA: ENST00000262435.13

SMURF2-201, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF2, Length 2,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-201ENST00000262435 KIF28PB7ZC32 967 aa18.39■□□□□ 0.53
SMURF2-201ENST00000262435 PDIA4P13667 645 aaKnown RBP18.39■□□□□ 0.53
SMURF2-201ENST00000262435 ZRSR1Q15695 479 aaKnown RBP18.39■□□□□ 0.53
SMURF2-201ENST00000262435 CCDC112Q8NEF3 446 aa18.39■□□□□ 0.53
SMURF2-201ENST00000262435 LLPHQ9BRT6 129 aaKnown RBP18.39■□□□□ 0.53
SMURF2-201ENST00000262435 SENP2Q9HC62 589 aa18.39■□□□□ 0.53
SMURF2-201ENST00000262435 C1orf167Q5SNV9 1468 aa18.39■□□□□ 0.53
SMURF2-201ENST00000262435 SNAP23O00161 211 aa18.39■□□□□ 0.53
SMURF2-201ENST00000262435 CEP135Q66GS9 1140 aa18.39■□□□□ 0.53
SMURF2-201ENST00000262435 CCDC158Q5M9N0 1113 aa18.38■□□□□ 0.53
SMURF2-201ENST00000262435 PHKBQ93100 1093 aa18.38■□□□□ 0.53
SMURF2-201ENST00000262435 CHD2O14647 1828 aaKnown RBP18.38■□□□□ 0.53
SMURF2-201ENST00000262435 HELBQ8NG08 1087 aaPredicted RBP18.38■□□□□ 0.53
SMURF2-201ENST00000262435 MRPS27Q92552 414 aaKnown RBP18.38■□□□□ 0.53
SMURF2-201ENST00000262435 PRDM11Q9NQV5 511 aa18.38■□□□□ 0.53
SMURF2-201ENST00000262435 CCDC82Q8N4S0 544 aa18.37■□□□□ 0.53
SMURF2-201ENST00000262435 PRDM4Q9UKN5 801 aa18.37■□□□□ 0.53
SMURF2-201ENST00000262435 OVOS2A0A0G2JMS6 1433 aa18.37■□□□□ 0.53
SMURF2-201ENST00000262435 LMOD1P29536 600 aaPredicted RBP18.37■□□□□ 0.53
SMURF2-201ENST00000262435 IMMTQ16891 758 aaKnown RBP18.37■□□□□ 0.53
SMURF2-201ENST00000262435 CEP57L1Q8IYX8 460 aa18.37■□□□□ 0.53
SMURF2-201ENST00000262435 ANO10Q9NW15 660 aa18.37■□□□□ 0.53
SMURF2-201ENST00000262435 A0A0G2JS52 829 aa18.36■□□□□ 0.53
SMURF2-201ENST00000262435 IDH1O75874 414 aaKnown RBP18.36■□□□□ 0.53
SMURF2-201ENST00000262435 GOLGA8FQ08AF8 430 aa18.36■□□□□ 0.53
SMURF2-201ENST00000262435 GOLGA8DPQ0D2H9 430 aa18.36■□□□□ 0.53
SMURF2-201ENST00000262435 RALYLQ86SE5 291 aaKnown RBP18.36■□□□□ 0.53
SMURF2-201ENST00000262435 FMR1NBQ8N0W7 255 aaPredicted RBP18.36■□□□□ 0.53
SMURF2-201ENST00000262435 ZCRB1Q8TBF4 217 aaKnown RBP18.36■□□□□ 0.53
SMURF2-201ENST00000262435 IFNKQ9P0W0 207 aa18.36■□□□□ 0.53
SMURF2-201ENST00000262435 ANTXR2P58335 489 aa18.36■□□□□ 0.53
SMURF2-201ENST00000262435 SPECC1Q5M775 1068 aa18.36■□□□□ 0.53
SMURF2-201ENST00000262435 TMC6Q7Z403 805 aa18.36■□□□□ 0.53
SMURF2-201ENST00000262435 MICU3Q86XE3 530 aa18.36■□□□□ 0.53
SMURF2-201ENST00000262435 LINC00301Q8NCQ3 95 aa18.36■□□□□ 0.53
SMURF2-201ENST00000262435 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
SMURF2-201ENST00000262435 GPAA1O43292 621 aa18.35■□□□□ 0.53
SMURF2-201ENST00000262435 PTPN14Q15678 1187 aa18.35■□□□□ 0.53
SMURF2-201ENST00000262435 SYNE3Q6ZMZ3 975 aa18.35■□□□□ 0.53
SMURF2-201ENST00000262435 XPO4Q9C0E2 1151 aaKnown RBP18.35■□□□□ 0.53
SMURF2-201ENST00000262435 SALL1Q9NSC2 1324 aa18.35■□□□□ 0.53
SMURF2-201ENST00000262435 SLIT3O75094 1523 aa18.35■□□□□ 0.53
SMURF2-201ENST00000262435 ZNF213O14771 459 aa18.35■□□□□ 0.53
SMURF2-201ENST00000262435 SPTLC2O15270 562 aa18.35■□□□□ 0.53
SMURF2-201ENST00000262435 ZSCAN20P17040 1043 aaPredicted RBP18.35■□□□□ 0.53
SMURF2-201ENST00000262435 ZNF274Q96GC6 653 aaPredicted RBP18.35■□□□□ 0.53
SMURF2-201ENST00000262435 ZNF215Q9UL58 517 aaPredicted RBP18.35■□□□□ 0.53
SMURF2-201ENST00000262435 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.34■□□□□ 0.53
SMURF2-201ENST00000262435 USP54Q70EL1 1684 aa18.34■□□□□ 0.53
SMURF2-201ENST00000262435 CTIFO43310 598 aaKnown RBP18.34■□□□□ 0.53
SMURF2-201ENST00000262435 ATP1A3P13637 1013 aa18.34■□□□□ 0.53
SMURF2-201ENST00000262435 METTL24Q5JXM2 366 aa18.34■□□□□ 0.53
SMURF2-201ENST00000262435 CLIC6Q96NY7 704 aa18.34■□□□□ 0.53
SMURF2-201ENST00000262435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.34■□□□□ 0.532e-6■■■□□ 14.6
SMURF2-201ENST00000262435 SMTNL1A8MU46 457 aa18.33■□□□□ 0.53
SMURF2-201ENST00000262435 SLC9C2Q5TAH2 1124 aa18.33■□□□□ 0.53
SMURF2-201ENST00000262435 CCDC191Q8NCU4 936 aa18.33■□□□□ 0.53
SMURF2-201ENST00000262435 FBXO18Q8NFZ0 1043 aa18.33■□□□□ 0.53
SMURF2-201ENST00000262435 AGXT2Q9BYV1 514 aa18.33■□□□□ 0.53
SMURF2-201ENST00000262435 ASAP1Q9ULH1 1129 aa18.33■□□□□ 0.53
SMURF2-201ENST00000262435 KAT6BQ8WYB5 2073 aa18.33■□□□□ 0.53
SMURF2-201ENST00000262435 CTAGE5O15320 804 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 WDHD1O75717 1129 aaPredicted RBP18.33■□□□□ 0.52
SMURF2-201ENST00000262435 ZNF202O95125 648 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 CCZ1BP86790 482 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 CCZ1P86791 482 aaPredicted RBP18.33■□□□□ 0.52
SMURF2-201ENST00000262435 GNL2Q13823 731 aaKnown RBP18.33■□□□□ 0.52
SMURF2-201ENST00000262435 NBPF11Q86T75 865 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 ANKRD7Q92527 254 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 KIAA1468Q9P260 1216 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 MRC1P22897 1456 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 TMEM94Q12767 1356 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 MYSM1Q5VVJ2 828 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 ADALQ6DHV7 355 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 LDHAL6AQ6ZMR3 332 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 DNAJC10Q8IXB1 793 aa18.33■□□□□ 0.52
SMURF2-201ENST00000262435 B4E1Z4 1266 aa18.32■□□□□ 0.52
SMURF2-201ENST00000262435 SLC3A2P08195 630 aaKnown RBP18.32■□□□□ 0.52
SMURF2-201ENST00000262435 ATP2B1P20020 1258 aa18.32■□□□□ 0.52
SMURF2-201ENST00000262435 IFIT5Q13325 482 aaKnown RBP18.32■□□□□ 0.52
SMURF2-201ENST00000262435 CMTR1Q8N1G2 835 aaKnown RBP18.32■□□□□ 0.52
SMURF2-201ENST00000262435 MRFAP1L1Q96HT8 127 aa18.32■□□□□ 0.52
SMURF2-201ENST00000262435 MCAMP43121 646 aa18.32■□□□□ 0.52
SMURF2-201ENST00000262435 HLFQ16534 295 aa18.32■□□□□ 0.52
SMURF2-201ENST00000262435 SMAP1Q8IYB5 467 aaPredicted RBP18.32■□□□□ 0.52
SMURF2-201ENST00000262435 GREM2Q9H772 168 aa18.32■□□□□ 0.52
SMURF2-201ENST00000262435 RTEL1Q9NZ71 1219 aa18.32■□□□□ 0.52
SMURF2-201ENST00000262435 CYB5R4Q7L1T6 521 aa18.31■□□□□ 0.52
SMURF2-201ENST00000262435 TMX1Q9H3N1 280 aa18.31■□□□□ 0.52
SMURF2-201ENST00000262435 PFKFB1P16118 471 aa18.31■□□□□ 0.52
SMURF2-201ENST00000262435 TBC1D10CQ8IV04 446 aa18.31■□□□□ 0.52
SMURF2-201ENST00000262435 NCOA7Q8NI08 942 aa18.31■□□□□ 0.52
SMURF2-201ENST00000262435 CNNM1Q9NRU3 951 aa18.31■□□□□ 0.52
SMURF2-201ENST00000262435 MROH7-TTC4A0A0A0MT08 1334 aa18.3■□□□□ 0.52
SMURF2-201ENST00000262435 MB21D2Q8IYB1 491 aaPredicted RBP18.3■□□□□ 0.52
SMURF2-201ENST00000262435 FAM177A1Q8N128 213 aaPredicted RBP18.3■□□□□ 0.52
SMURF2-201ENST00000262435 LRRN4CLQ8ND94 238 aa18.3■□□□□ 0.52
SMURF2-201ENST00000262435 ZKSCAN3Q9BRR0 538 aa18.3■□□□□ 0.52
SMURF2-201ENST00000262435 TOMM22Q9NS69 142 aa18.3■□□□□ 0.52
SMURF2-201ENST00000262435 AFDNP55196 1824 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms