RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 CCDC57Q2TAC2 916 aa16.21■□□□□ 0.19
TUBGCP3-201ENST00000261965 FKBP15Q5T1M5 1219 aa16.21■□□□□ 0.19
TUBGCP3-201ENST00000261965 PUF60Q9UHX1 559 aaKnown RBP16.21■□□□□ 0.19
TUBGCP3-201ENST00000261965 CLIC4Q9Y696 253 aa16.21■□□□□ 0.19
TUBGCP3-201ENST00000261965 DNA2P51530 1060 aa16.21■□□□□ 0.19
TUBGCP3-201ENST00000261965 HSP90B2PQ58FF3 399 aa16.21■□□□□ 0.19
TUBGCP3-201ENST00000261965 SYNE4Q8N205 404 aa16.21■□□□□ 0.19
TUBGCP3-201ENST00000261965 MYL10Q9BUA6 226 aa16.21■□□□□ 0.19
TUBGCP3-201ENST00000261965 ZSCAN16Q9H4T2 348 aaPredicted RBP16.21■□□□□ 0.19
TUBGCP3-201ENST00000261965 NEK11Q8NG66 645 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 HAUS7Q99871 368 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 TRIM34Q9BYJ4 488 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 LZTFL1Q9NQ48 299 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 CYP27B1O15528 508 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 ATF3P18847 181 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 AKAP17AQ02040 695 aaKnown RBP16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 SLC4A8Q2Y0W8 1093 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 M0R2C6 588 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 CTDNEP1O95476 244 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 UBASH3AP57075 661 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 NCBP1Q09161 790 aaKnown RBP16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 C10orf67Q8IYJ2 551 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 CWC25Q9NXE8 425 aaPredicted RBP16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 DENND2AQ9ULE3 1009 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 ELP1O95163 1332 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 STX17P56962 302 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 HELBQ8NG08 1087 aaPredicted RBP16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 CARD6Q9BX69 1037 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 PCDHA7Q9UN72 937 aa16.2■□□□□ 0.18
TUBGCP3-201ENST00000261965 ERBB3P21860 1342 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 MED23Q9ULK4 1368 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 NPHP4O75161 1426 aaPredicted RBP16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 PXDNLA1KZ92 1463 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 PIK3C2AO00443 1686 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 ZSCAN20P17040 1043 aaPredicted RBP16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 PDIA3P30101 505 aaKnown RBP16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 NDUFA8P51970 172 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 CCDC158Q5M9N0 1113 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 IL17RAQ96F46 866 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 PATL2C9JE40 543 aaKnown RBP16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 PRC1O43663 620 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 OSBP2Q969R2 916 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 DPCR1Q3MIW9 517 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 TDRD7Q8NHU6 1098 aaKnown RBP16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 KCNB2Q92953 911 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 TIGD1Q96MW7 591 aa16.19■□□□□ 0.18
TUBGCP3-201ENST00000261965 GYS2P54840 703 aa16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 AXDND1Q5T1B0 1012 aaPredicted RBP16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 MAST3O60307 1309 aa16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 RFX5P48382 616 aaPredicted RBP16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 LRRC8AQ8IWT6 810 aa16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 ZNF397Q8NF99 534 aaPredicted RBP16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 CCDC12Q8WUD4 166 aaPredicted RBP16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 MRPS27Q92552 414 aaKnown RBP16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 PHKBQ93100 1093 aa16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 INCENPQ9NQS7 918 aa16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 PFKFB2O60825 505 aa16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 XPO4Q9C0E2 1151 aaKnown RBP16.18■□□□□ 0.18
TUBGCP3-201ENST00000261965 RNF113AO15541 343 aaKnown RBP16.17■□□□□ 0.18
TUBGCP3-201ENST00000261965 SEC31AO94979 1220 aaKnown RBP16.17■□□□□ 0.18
TUBGCP3-201ENST00000261965 IMMTQ16891 758 aaKnown RBP16.17■□□□□ 0.18
TUBGCP3-201ENST00000261965 KIF4BQ2VIQ3 1234 aa16.17■□□□□ 0.18
TUBGCP3-201ENST00000261965 GDAP1L1Q96MZ0 367 aa16.17■□□□□ 0.18
TUBGCP3-201ENST00000261965 XRN1Q8IZH2 1706 aaKnown RBP16.17■□□□□ 0.18
TUBGCP3-201ENST00000261965 ZAP70P43403 619 aa16.17■□□□□ 0.18
TUBGCP3-201ENST00000261965 FAM160A1Q05DH4 1040 aa16.17■□□□□ 0.18
TUBGCP3-201ENST00000261965 ADD1P35611 737 aaKnown RBP16.17■□□□□ 0.18
TUBGCP3-201ENST00000261965 LONRF3Q496Y0 759 aa16.17■□□□□ 0.18
TUBGCP3-201ENST00000261965 CNNM3Q8NE01 707 aa16.17■□□□□ 0.18
TUBGCP3-201ENST00000261965 SCARF1Q14162 830 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 SAFBQ15424 915 aaKnown RBP eCLIP16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 PLA2G4DQ86XP0 818 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 ANKRD65E5RJM6 399 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 NAP1L1P55209 391 aaKnown RBP16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 BMS1Q14692 1282 aaKnown RBP16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 PRDM11Q9NQV5 511 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 CNNM1Q9NRU3 951 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 RGPD1P0DJD0 1748 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 NWD1Q149M9 1564 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 NBPF26B4DH59 902 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 AFMP43652 599 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 METTL24Q5JXM2 366 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 NBPF10Q6P3W6 841 aaKnown RBP16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 NBPF15Q8N660 670 aa16.16■□□□□ 0.18
TUBGCP3-201ENST00000261965 SNAP23O00161 211 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 COBLO75128 1261 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 TPM1P09493 284 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 RHOXF2BP0C7M4 288 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 CAGE1Q8TC20 777 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 RHOXF2Q9BQY4 288 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 DESI2Q9BSY9 194 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 PRDM4Q9UKN5 801 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 EYA2O00167 538 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 ZNF213O14771 459 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 FGAP02671 866 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 HMGB1P09429 215 aaKnown RBP16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 PLBD2Q8NHP8 589 aa16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 ZCCHC17Q9NP64 241 aaKnown RBP16.15■□□□□ 0.18
TUBGCP3-201ENST00000261965 RAI14Q9P0K7 980 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms