RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 LAMA4Q16363 1823 aa13.31□□□□□ -0.28
SLC3A1-201ENST00000260649 LRRFIP1Q32MZ4 808 aaKnown RBP13.31□□□□□ -0.28
SLC3A1-201ENST00000260649 DNTTIP2Q5QJE6 756 aaKnown RBP13.31□□□□□ -0.28
SLC3A1-201ENST00000260649 SUSD4Q5VX71 490 aa13.31□□□□□ -0.28
SLC3A1-201ENST00000260649 PLA2G12BQ9BX93 195 aa13.31□□□□□ -0.28
SLC3A1-201ENST00000260649 CTNNA3Q9UI47 895 aa13.31□□□□□ -0.28
SLC3A1-201ENST00000260649 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
SLC3A1-201ENST00000260649 ELP1O95163 1332 aa13.31□□□□□ -0.28
SLC3A1-201ENST00000260649 PDE8AO60658 829 aa13.31□□□□□ -0.28
SLC3A1-201ENST00000260649 BCL9O00512 1426 aa13.31□□□□□ -0.28
SLC3A1-201ENST00000260649 ZNF532Q9HCE3 1301 aa13.3□□□□□ -0.28
SLC3A1-201ENST00000260649 PDE8BO95263 885 aa13.3□□□□□ -0.28
SLC3A1-201ENST00000260649 ZFYP08048 801 aaPredicted RBP13.3□□□□□ -0.28
SLC3A1-201ENST00000260649 FDPSP14324 419 aaKnown RBP13.3□□□□□ -0.28
SLC3A1-201ENST00000260649 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.3□□□□□ -0.28
SLC3A1-201ENST00000260649 DNAJC25Q9H1X3 360 aa13.3□□□□□ -0.28
SLC3A1-201ENST00000260649 CPLX1O14810 134 aa13.3□□□□□ -0.28
SLC3A1-201ENST00000260649 ME1P48163 572 aa13.3□□□□□ -0.28
SLC3A1-201ENST00000260649 ANTXR2P58335 489 aa13.3□□□□□ -0.28
SLC3A1-201ENST00000260649 CCAR1Q8IX12 1150 aaKnown RBP13.3□□□□□ -0.28
SLC3A1-201ENST00000260649 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.3□□□□□ -0.28
SLC3A1-201ENST00000260649 MCM5P33992 734 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 HMGN5P82970 282 aaKnown RBP13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 NCOA7Q8NI08 942 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 MPHOSPH8Q99549 860 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 LLPHQ9BRT6 129 aaKnown RBP13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 ZSCAN16Q9H4T2 348 aaPredicted RBP13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 CFAP45Q9UL16 551 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 ZNF500O60304 480 aaPredicted RBP13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 ADD2P35612 726 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 SASS6Q6UVJ0 657 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 MYL10Q9BUA6 226 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 SENP2Q9HC62 589 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 ORC3Q9UBD5 711 aaPredicted RBP13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 CDHR2Q9BYE9 1310 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 B4E1Z4 1266 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 ADD1P35611 737 aaKnown RBP13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 CRKLP46109 303 aaKnown RBP13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 DDB1Q16531 1140 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 TBC1D10CQ8IV04 446 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 ZNF274Q96GC6 653 aaPredicted RBP13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 AIFM3Q96NN9 605 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 GOLPH3LQ9H4A5 285 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 CLSTN2Q9H4D0 955 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 CBX8Q9HC52 389 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 TOMM22Q9NS69 142 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 CARMIL3Q8ND23 1372 aa13.29□□□□□ -0.28
SLC3A1-201ENST00000260649 ITGB4P16144 1822 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 TRDNQ13061 729 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 MB21D2Q8IYB1 491 aaPredicted RBP13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 VGLL2Q8N8G2 317 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 AGXT2Q9BYV1 514 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 DDX19AQ9NUU7 478 aaKnown RBP13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 FBXO3Q9UK99 471 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 PDE6AP16499 860 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 KIAA2012Q0VF49 1180 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 CYB5R4Q7L1T6 521 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 DRC7Q8IY82 874 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 MAGEB6Q8N7X4 407 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 FAM200AQ8TCP9 573 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 AIDAQ96BJ3 306 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 KIF3AQ9Y496 699 aa13.28□□□□□ -0.28
SLC3A1-201ENST00000260649 WTIPA6NIX2 430 aaPredicted RBP13.27□□□□□ -0.28
SLC3A1-201ENST00000260649 KCNQ2O43526 872 aa13.27□□□□□ -0.28
SLC3A1-201ENST00000260649 IL6STP40189 918 aaPredicted RBP13.27□□□□□ -0.28
SLC3A1-201ENST00000260649 RBM10P98175 930 aaKnown RBP13.27□□□□□ -0.28
SLC3A1-201ENST00000260649 CTDSPL2Q05D32 466 aa13.27□□□□□ -0.28
SLC3A1-201ENST00000260649 RRP12Q5JTH9 1297 aaKnown RBP13.27□□□□□ -0.28
SLC3A1-201ENST00000260649 BICDL1Q6ZP65 573 aa13.27□□□□□ -0.28
SLC3A1-201ENST00000260649 MICU3Q86XE3 530 aa13.27□□□□□ -0.28
SLC3A1-201ENST00000260649 C8orf76Q96K31 380 aa13.27□□□□□ -0.28
SLC3A1-201ENST00000260649 NBPF3Q9H094 633 aa13.27□□□□□ -0.28
SLC3A1-201ENST00000260649 NIP7Q9Y221 180 aaKnown RBP eCLIP13.27□□□□□ -0.28
SLC3A1-201ENST00000260649 BCAMP50895 628 aa13.27□□□□□ -0.29
SLC3A1-201ENST00000260649 NAA16Q6N069 864 aaPredicted RBP13.27□□□□□ -0.29
SLC3A1-201ENST00000260649 ARMT1Q9H993 441 aa13.27□□□□□ -0.29
SLC3A1-201ENST00000260649 HPS5Q9UPZ3 1129 aa13.27□□□□□ -0.29
SLC3A1-201ENST00000260649 ZNF34Q8IZ26 560 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 FSIP1Q8NA03 581 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 PHKBQ93100 1093 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 CCDC87Q9NVE4 849 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 PRKAB2O43741 272 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 ZNF165P49910 485 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 ITPK1Q13572 414 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 RASGRF1Q13972 1273 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 PUM3Q15397 648 aaKnown RBP13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 SF3A1Q15459 793 aaKnown RBP13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 INTS5Q6P9B9 1019 aaKnown RBP13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 NFXL1Q6ZNB6 911 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 MIGA1Q8NAN2 632 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 CLIC4Q9Y696 253 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 A0A1B0GVL5 298 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 UBE2Q2LH0YL09 131 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 MBD4O95243 580 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 PIP4K2BP78356 416 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 CCDC73Q6ZRK6 1079 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 CCDC82Q8N4S0 544 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms