RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SEMA3EO15041 775 aa19.27■□□□□ 0.67
CCDC90B-201ENST00000260054 FRAT2O75474 233 aaPredicted RBP19.27■□□□□ 0.67
CCDC90B-201ENST00000260054 MAP4K4O95819 1239 aaPredicted RBP19.27■□□□□ 0.67
CCDC90B-201ENST00000260054 ZAP70P43403 619 aa19.27■□□□□ 0.67
CCDC90B-201ENST00000260054 DNAJC2Q99543 621 aaKnown RBP19.27■□□□□ 0.67
CCDC90B-201ENST00000260054 CHD4Q14839 1912 aa19.26■□□□□ 0.67
CCDC90B-201ENST00000260054 PODNQ7Z5L7 613 aa19.26■□□□□ 0.67
CCDC90B-201ENST00000260054 EDC3Q96F86 508 aaKnown RBP19.26■□□□□ 0.67
CCDC90B-201ENST00000260054 DENND2AQ9ULE3 1009 aa19.26■□□□□ 0.67
CCDC90B-201ENST00000260054 JAG2Q9Y219 1238 aa19.26■□□□□ 0.67
CCDC90B-201ENST00000260054 YDJCA8MPS7 323 aa19.25■□□□□ 0.67
CCDC90B-201ENST00000260054 KCNQ5Q9NR82 932 aa19.25■□□□□ 0.67
CCDC90B-201ENST00000260054 GRIN3BO60391 1043 aa19.24■□□□□ 0.67
CCDC90B-201ENST00000260054 LMNB1P20700 586 aa19.24■□□□□ 0.67
CCDC90B-201ENST00000260054 CHAF1AQ13111 956 aaPredicted RBP19.24■□□□□ 0.67
CCDC90B-201ENST00000260054 NIM1KQ8IY84 436 aa19.24■□□□□ 0.67
CCDC90B-201ENST00000260054 ANTXR1Q9H6X2 564 aa19.24■□□□□ 0.67
CCDC90B-201ENST00000260054 PDS5AQ29RF7 1337 aaKnown RBP19.24■□□□□ 0.67
CCDC90B-201ENST00000260054 GOLIM4O00461 696 aa19.24■□□□□ 0.67
CCDC90B-201ENST00000260054 CYP2E1P05181 493 aaPredicted RBP19.24■□□□□ 0.67
CCDC90B-201ENST00000260054 PAG1Q9NWQ8 432 aa19.24■□□□□ 0.67
CCDC90B-201ENST00000260054 SCN9AQ15858 1988 aa19.23■□□□□ 0.67
CCDC90B-201ENST00000260054 MYH13Q9UKX3 1938 aa19.23■□□□□ 0.67
CCDC90B-201ENST00000260054 GTF2IP78347 998 aa19.23■□□□□ 0.67
CCDC90B-201ENST00000260054 BMP2KLQ5H9B9 411 aa19.23■□□□□ 0.67
CCDC90B-201ENST00000260054 JDP2Q8WYK2 163 aa19.23■□□□□ 0.67
CCDC90B-201ENST00000260054 ZNRF3Q9ULT6 936 aa19.23■□□□□ 0.67
CCDC90B-201ENST00000260054 SBF1O95248 1867 aa19.22■□□□□ 0.67
CCDC90B-201ENST00000260054 CCDC88AQ3V6T2 1871 aa19.22■□□□□ 0.67
CCDC90B-201ENST00000260054 TBC1D9Q6ZT07 1266 aa19.22■□□□□ 0.67
CCDC90B-201ENST00000260054 FAM205AQ6ZU69 1335 aa19.22■□□□□ 0.67
CCDC90B-201ENST00000260054 TRIM6-TRIM34B2RNG4 842 aa19.21■□□□□ 0.67
CCDC90B-201ENST00000260054 SDSP20132 328 aa19.21■□□□□ 0.67
CCDC90B-201ENST00000260054 TTLL5Q6EMB2 1281 aa19.21■□□□□ 0.67
CCDC90B-201ENST00000260054 PIH1D3Q9NQM4 214 aaKnown RBP19.21■□□□□ 0.67
CCDC90B-201ENST00000260054 FBXW7Q969H0 707 aa19.2■□□□□ 0.66
CCDC90B-201ENST00000260054 RILPL2Q969X0 211 aa19.2■□□□□ 0.66
CCDC90B-201ENST00000260054 RAD17O75943 681 aa19.2■□□□□ 0.66
CCDC90B-201ENST00000260054 CNTROBQ8N137 903 aa19.2■□□□□ 0.66
CCDC90B-201ENST00000260054 WDR66Q8TBY9 1149 aa19.2■□□□□ 0.66
CCDC90B-201ENST00000260054 EVI5LQ96CN4 794 aa19.2■□□□□ 0.66
CCDC90B-201ENST00000260054 RNF181Q9P0P0 153 aa19.2■□□□□ 0.66
CCDC90B-201ENST00000260054 SALL1Q9NSC2 1324 aa19.19■□□□□ 0.66
CCDC90B-201ENST00000260054 USP17L3A6NCW0 530 aa19.19■□□□□ 0.66
CCDC90B-201ENST00000260054 USP17L4A6NCW7 530 aa19.19■□□□□ 0.66
CCDC90B-201ENST00000260054 FZD9O00144 591 aa19.19■□□□□ 0.66
CCDC90B-201ENST00000260054 TTF1Q15361 905 aaPredicted RBP19.19■□□□□ 0.66
CCDC90B-201ENST00000260054 DACT2Q5SW24 774 aa19.19■□□□□ 0.66
CCDC90B-201ENST00000260054 STRIP1Q5VSL9 837 aa19.19■□□□□ 0.66
CCDC90B-201ENST00000260054 USP17L1Q7RTZ2 530 aa19.19■□□□□ 0.66
CCDC90B-201ENST00000260054 MXD3Q9BW11 206 aa19.19■□□□□ 0.66
CCDC90B-201ENST00000260054 ABCF2Q9UG63 623 aa19.19■□□□□ 0.66
CCDC90B-201ENST00000260054 ZNF646O15015 1829 aaPredicted RBP19.19■□□□□ 0.66
CCDC90B-201ENST00000260054 DICER1Q9UPY3 1922 aaKnown RBP19.18■□□□□ 0.66
CCDC90B-201ENST00000260054 CXCL9Q07325 125 aa19.18■□□□□ 0.66
CCDC90B-201ENST00000260054 MFSD14BQ5SR56 506 aa19.18■□□□□ 0.66
CCDC90B-201ENST00000260054 C9orf131Q5VYM1 1079 aa19.18■□□□□ 0.66
CCDC90B-201ENST00000260054 CERS5Q8N5B7 392 aa19.18■□□□□ 0.66
CCDC90B-201ENST00000260054 KBTBD3Q8NAB2 608 aa19.18■□□□□ 0.66
CCDC90B-201ENST00000260054 PSMD14O00487 310 aa19.17■□□□□ 0.66
CCDC90B-201ENST00000260054 PRDX5P30044 214 aa19.17■□□□□ 0.66
CCDC90B-201ENST00000260054 GRIK5Q16478 980 aa19.17■□□□□ 0.66
CCDC90B-201ENST00000260054 TBC1D22AQ8WUA7 517 aa19.17■□□□□ 0.66
CCDC90B-201ENST00000260054 PSME4Q14997 1843 aa19.17■□□□□ 0.66
CCDC90B-201ENST00000260054 MYO5AQ9Y4I1 1855 aaKnown RBP19.17■□□□□ 0.66
CCDC90B-201ENST00000260054 FSD1Q9BTV5 496 aa19.17■□□□□ 0.66
CCDC90B-201ENST00000260054 IDH1O75874 414 aaKnown RBP19.16■□□□□ 0.66
CCDC90B-201ENST00000260054 CIAPIN1Q6FI81 312 aa19.16■□□□□ 0.66
CCDC90B-201ENST00000260054 ZGPATQ8N5A5 531 aaKnown RBP19.16■□□□□ 0.66
CCDC90B-201ENST00000260054 LRP2BPQ9P2M1 347 aa19.16■□□□□ 0.66
CCDC90B-201ENST00000260054 DOCK2Q92608 1830 aa19.16■□□□□ 0.66
CCDC90B-201ENST00000260054 ZNF541Q9H0D2 1346 aa19.15■□□□□ 0.66
CCDC90B-201ENST00000260054 CHGBP05060 677 aa19.15■□□□□ 0.66
CCDC90B-201ENST00000260054 VIL1P09327 827 aaKnown RBP19.15■□□□□ 0.66
CCDC90B-201ENST00000260054 FKBP1AP62942 108 aaKnown RBP19.15■□□□□ 0.66
CCDC90B-201ENST00000260054 TIAM2Q8IVF5 1701 aa19.15■□□□□ 0.66
CCDC90B-201ENST00000260054 EIF6P56537 245 aaKnown RBP19.14■□□□□ 0.66
CCDC90B-201ENST00000260054 ERICH6Q7L0X2 663 aa19.14■□□□□ 0.66
CCDC90B-201ENST00000260054 RAI14Q9P0K7 980 aa19.14■□□□□ 0.66
CCDC90B-201ENST00000260054 AK9Q5TCS8 1911 aa19.14■□□□□ 0.65
CCDC90B-201ENST00000260054 LDHBP07195 334 aaKnown RBP19.14■□□□□ 0.65
CCDC90B-201ENST00000260054 SLFNL1Q499Z3 407 aa19.14■□□□□ 0.65
CCDC90B-201ENST00000260054 SPTY2D1Q68D10 685 aaPredicted RBP19.14■□□□□ 0.65
CCDC90B-201ENST00000260054 RSBN1LQ6PCB5 846 aaPredicted RBP19.14■□□□□ 0.65
CCDC90B-201ENST00000260054 ZNF384Q8TF68 577 aa19.14■□□□□ 0.65
CCDC90B-201ENST00000260054 ZBTB12Q9Y330 459 aaPredicted RBP19.14■□□□□ 0.65
CCDC90B-201ENST00000260054 MAP3K12Q12852 859 aa19.13■□□□□ 0.65
CCDC90B-201ENST00000260054 TNIP1Q15025 636 aa19.13■□□□□ 0.65
CCDC90B-201ENST00000260054 DCAF8L1A6NGE4 600 aa19.12■□□□□ 0.65
CCDC90B-201ENST00000260054 PDE6AP16499 860 aa19.12■□□□□ 0.65
CCDC90B-201ENST00000260054 MECOMQ03112 1051 aa19.12■□□□□ 0.65
CCDC90B-201ENST00000260054 SLC9C2Q5TAH2 1124 aa19.12■□□□□ 0.65
CCDC90B-201ENST00000260054 NSUN4Q96CB9 384 aaKnown RBP19.12■□□□□ 0.65
CCDC90B-201ENST00000260054 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.12■□□□□ 0.65
CCDC90B-201ENST00000260054 SUGT1Q9Y2Z0 365 aa19.12■□□□□ 0.65
CCDC90B-201ENST00000260054 RFX7Q2KHR2 1363 aa19.12■□□□□ 0.65
CCDC90B-201ENST00000260054 F8W031 263 aaPredicted RBP19.11■□□□□ 0.65
CCDC90B-201ENST00000260054 ADD2P35612 726 aa19.11■□□□□ 0.65
CCDC90B-201ENST00000260054 KIAA0825Q8IV33 1275 aa19.11■□□□□ 0.65
CCDC90B-201ENST00000260054 MAGEB6Q8N7X4 407 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms