RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 C7orf69Q9H7B7 122 aa9.28□□□□□ -0.92
TRA2B-201ENST00000259043 TM4SF5O14894 197 aa9.27□□□□□ -0.93
TRA2B-201ENST00000259043 SMNDC1O75940 238 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRA2B-201ENST00000259043 CDC27P30260 824 aa9.27□□□□□ -0.93
TRA2B-201ENST00000259043 TXNDC11Q6PKC3 985 aa9.27□□□□□ -0.93
TRA2B-201ENST00000259043 TRIM42Q8IWZ5 723 aa9.27□□□□□ -0.93
TRA2B-201ENST00000259043 PMEPA1Q969W9 287 aa9.27□□□□□ -0.93
TRA2B-201ENST00000259043 POP1Q99575 1024 aaKnown RBP9.27□□□□□ -0.93
TRA2B-201ENST00000259043 DBNDD2Q9BQY9 259 aa9.27□□□□□ -0.93
TRA2B-201ENST00000259043 DZANK1Q9NVP4 752 aa9.27□□□□□ -0.93
TRA2B-201ENST00000259043 KCNK4Q9NYG8 393 aa9.27□□□□□ -0.93
TRA2B-201ENST00000259043 RNF114Q9Y508 228 aa9.27□□□□□ -0.93
TRA2B-201ENST00000259043 SOWAHDA6NJG2 315 aa9.26□□□□□ -0.93
TRA2B-201ENST00000259043 PHACTR2O75167 634 aa9.26□□□□□ -0.93
TRA2B-201ENST00000259043 IGHA2P01877 340 aa9.26□□□□□ -0.93
TRA2B-201ENST00000259043 KLHL23Q8NBE8 558 aa9.26□□□□□ -0.93
TRA2B-201ENST00000259043 MYRFLQ96LU7 910 aa9.26□□□□□ -0.93
TRA2B-201ENST00000259043 HMX2A2RU54 273 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 PRR19A6NJB7 356 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 FSCN2O14926 492 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 ADAMTS4O75173 837 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 DUOXA2Q1HG44 320 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 FAM117BQ6P1L5 589 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 KIAA1211Q6ZU35 1233 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 DTX1Q86Y01 620 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 HHIPQ96QV1 700 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 FAM129BQ96TA1 746 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 ADAM19Q9H013 955 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 ZFYVE28Q9HCC9 887 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 BRPF3Q9ULD4 1205 aa9.25□□□□□ -0.93
TRA2B-201ENST00000259043 TRPA1O75762 1119 aa9.24□□□□□ -0.93
TRA2B-201ENST00000259043 CARD10Q9BWT7 1032 aa9.24□□□□□ -0.93
TRA2B-201ENST00000259043 WNT11O96014 354 aa9.23□□□□□ -0.93
TRA2B-201ENST00000259043 PEAR1Q5VY43 1037 aaPredicted RBP9.23□□□□□ -0.93
TRA2B-201ENST00000259043 CLEC10AQ8IUN9 316 aa9.23□□□□□ -0.93
TRA2B-201ENST00000259043 NDUFB5O43674 189 aa9.22□□□□□ -0.93
TRA2B-201ENST00000259043 EPHA1P21709 976 aa9.22□□□□□ -0.93
TRA2B-201ENST00000259043 CDC25BP30305 580 aa9.22□□□□□ -0.93
TRA2B-201ENST00000259043 FAM20CQ8IXL6 584 aa9.22□□□□□ -0.93
TRA2B-201ENST00000259043 TMEM102Q8N9M5 508 aaPredicted RBP9.22□□□□□ -0.93
TRA2B-201ENST00000259043 CITED4Q96RK1 184 aa9.22□□□□□ -0.93
TRA2B-201ENST00000259043 FAM83CQ9BQN1 747 aa9.22□□□□□ -0.93
TRA2B-201ENST00000259043 ZKSCAN3Q9BRR0 538 aa9.22□□□□□ -0.93
TRA2B-201ENST00000259043 SH2B1Q9NRF2 756 aaPredicted RBP9.22□□□□□ -0.93
TRA2B-201ENST00000259043 AMOTL2Q9Y2J4 779 aa9.22□□□□□ -0.93
TRA2B-201ENST00000259043 PDE2AO00408 941 aaPredicted RBP9.21□□□□□ -0.94
TRA2B-201ENST00000259043 PTPRAP18433 802 aa9.21□□□□□ -0.94
TRA2B-201ENST00000259043 FOXD4L4Q8WXT5 416 aaPredicted RBP9.21□□□□□ -0.94
TRA2B-201ENST00000259043 OSMRQ99650 979 aa9.21□□□□□ -0.94
TRA2B-201ENST00000259043 LATS2Q9NRM7 1088 aa9.21□□□□□ -0.94
TRA2B-201ENST00000259043 FAM177BA6PVY3 158 aa9.2□□□□□ -0.94
TRA2B-201ENST00000259043 GPR182O15218 404 aa9.2□□□□□ -0.94
TRA2B-201ENST00000259043 EDN3P14138 238 aa9.2□□□□□ -0.94
TRA2B-201ENST00000259043 NXPE3Q969Y0 559 aa9.2□□□□□ -0.94
TRA2B-201ENST00000259043 SEC31BQ9NQW1 1179 aa9.2□□□□□ -0.94
TRA2B-201ENST00000259043 SOX13Q9UN79 622 aa9.2□□□□□ -0.94
TRA2B-201ENST00000259043 DDX3YO15523 660 aaKnown RBP9.19□□□□□ -0.94
TRA2B-201ENST00000259043 SART1O43290 800 aaKnown RBP9.19□□□□□ -0.94
TRA2B-201ENST00000259043 ADAM11O75078 769 aa9.19□□□□□ -0.94
TRA2B-201ENST00000259043 ANKRD34AQ69YU3 496 aa9.19□□□□□ -0.94
TRA2B-201ENST00000259043 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.19□□□□□ -0.94
TRA2B-201ENST00000259043 BEND4Q6ZU67 534 aa9.19□□□□□ -0.94
TRA2B-201ENST00000259043 GALNT12Q8IXK2 581 aa9.19□□□□□ -0.94
TRA2B-201ENST00000259043 SHKBP1Q8TBC3 707 aa9.19□□□□□ -0.94
TRA2B-201ENST00000259043 TRAIPQ9BWF2 469 aa9.19□□□□□ -0.94
TRA2B-201ENST00000259043 POLR3DP05423 398 aaPredicted RBP9.18□□□□□ -0.94
TRA2B-201ENST00000259043 BMP3P12645 472 aa9.18□□□□□ -0.94
TRA2B-201ENST00000259043 PDE3BQ13370 1112 aa9.18□□□□□ -0.94
TRA2B-201ENST00000259043 USPL1Q5W0Q7 1092 aa9.18□□□□□ -0.94
TRA2B-201ENST00000259043 UBASH3BQ8TF42 649 aa9.18□□□□□ -0.94
TRA2B-201ENST00000259043 WNT8BQ93098 351 aa9.18□□□□□ -0.94
TRA2B-201ENST00000259043 KLHDC7BQ96G42 594 aa9.18□□□□□ -0.94
TRA2B-201ENST00000259043 RBCK1Q9BYM8 510 aa9.18□□□□□ -0.94
TRA2B-201ENST00000259043 BHLHE41Q9C0J9 482 aaPredicted RBP9.18□□□□□ -0.94
TRA2B-201ENST00000259043 KCNF1Q9H3M0 494 aa9.18□□□□□ -0.94
TRA2B-201ENST00000259043 ORC1Q13415 861 aa9.17□□□□□ -0.94
TRA2B-201ENST00000259043 HIF3AQ9Y2N7 669 aa9.17□□□□□ -0.94
TRA2B-201ENST00000259043 H3BRJ5 948 aa9.16□□□□□ -0.94
TRA2B-201ENST00000259043 PIP4K2BP78356 416 aa9.16□□□□□ -0.94
TRA2B-201ENST00000259043 KCNA1Q09470 495 aa9.16□□□□□ -0.94
TRA2B-201ENST00000259043 ALKBH8Q96BT7 664 aaKnown RBP9.16□□□□□ -0.94
TRA2B-201ENST00000259043 RNF208Q9H0X6 261 aa9.16□□□□□ -0.94
TRA2B-201ENST00000259043 ADGRE2Q9UHX3 823 aa9.16□□□□□ -0.94
TRA2B-201ENST00000259043 PREPP48147 710 aa9.15□□□□□ -0.94
TRA2B-201ENST00000259043 CABP4P57796 275 aa9.15□□□□□ -0.94
TRA2B-201ENST00000259043 VN1R5Q7Z5H4 357 aa9.15□□□□□ -0.94
TRA2B-201ENST00000259043 BSNDQ8WZ55 320 aa9.15□□□□□ -0.94
TRA2B-201ENST00000259043 OSGEPQ9NPF4 335 aa9.15□□□□□ -0.94
TRA2B-201ENST00000259043 IVNS1ABPQ9Y6Y0 642 aa9.15□□□□□ -0.94
TRA2B-201ENST00000259043 A0A1W2PP55 124 aa9.14□□□□□ -0.95
TRA2B-201ENST00000259043 FZD5Q13467 585 aa9.14□□□□□ -0.95
TRA2B-201ENST00000259043 TCF12Q99081 682 aa9.14□□□□□ -0.95
TRA2B-201ENST00000259043 NIF3L1Q9GZT8 377 aa9.14□□□□□ -0.95
TRA2B-201ENST00000259043 ARID1BQ8NFD5 2236 aaPredicted RBP9.13□□□□□ -0.95
TRA2B-201ENST00000259043 WDR64B1ANS9 1081 aa9.13□□□□□ -0.95
TRA2B-201ENST00000259043 CPNE3O75131 537 aaKnown RBP9.13□□□□□ -0.95
TRA2B-201ENST00000259043 NEFLP07196 543 aa9.13□□□□□ -0.95
TRA2B-201ENST00000259043 HGSNATQ68CP4 663 aa9.13□□□□□ -0.95
TRA2B-201ENST00000259043 FDX2Q6P4F2 183 aa9.13□□□□□ -0.95
TRA2B-201ENST00000259043 TMC7Q7Z402 723 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 591.6 ms