RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 ANKRD20A12PQ8NF67 263 aa16.14■□□□□ 0.17
LIMD2-201ENST00000259006 XPO4Q9C0E2 1151 aaKnown RBP16.14■□□□□ 0.17
LIMD2-201ENST00000259006 TPM4P67936 248 aa16.14■□□□□ 0.17
LIMD2-201ENST00000259006 DNAI1Q9UI46 699 aa16.14■□□□□ 0.17
LIMD2-201ENST00000259006 FHOD1Q9Y613 1164 aa16.14■□□□□ 0.17
LIMD2-201ENST00000259006 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
LIMD2-201ENST00000259006 ARHGAP29Q52LW3 1261 aa16.14■□□□□ 0.17
LIMD2-201ENST00000259006 CEP57L1Q8IYX8 460 aa16.14■□□□□ 0.17
LIMD2-201ENST00000259006 KDRP35968 1356 aa16.13■□□□□ 0.17
LIMD2-201ENST00000259006 ATP5J2-PTCD1G3V325 749 aa16.13■□□□□ 0.17
LIMD2-201ENST00000259006 PTCD1O75127 700 aaKnown RBP16.13■□□□□ 0.17
LIMD2-201ENST00000259006 TFCP2Q12800 502 aa16.13■□□□□ 0.17
LIMD2-201ENST00000259006 KSR2Q6VAB6 950 aa16.13■□□□□ 0.17
LIMD2-201ENST00000259006 RPAINQ86UA6 219 aa16.13■□□□□ 0.17
LIMD2-201ENST00000259006 CCDC189A1A4V9 331 aa16.13■□□□□ 0.17
LIMD2-201ENST00000259006 HAND2P61296 217 aa16.13■□□□□ 0.17
LIMD2-201ENST00000259006 STOX1Q6ZVD7 989 aa16.13■□□□□ 0.17
LIMD2-201ENST00000259006 DBNDD2Q9BQY9 259 aa16.13■□□□□ 0.17
LIMD2-201ENST00000259006 SEC31AO94979 1220 aaKnown RBP16.12■□□□□ 0.17
LIMD2-201ENST00000259006 MYD88Q99836 296 aa16.12■□□□□ 0.17
LIMD2-201ENST00000259006 ANO10Q9NW15 660 aa16.12■□□□□ 0.17
LIMD2-201ENST00000259006 HIP1O00291 1037 aa16.12■□□□□ 0.17
LIMD2-201ENST00000259006 CLCN6P51797 869 aa16.12■□□□□ 0.17
LIMD2-201ENST00000259006 RBM43Q6ZSC3 357 aaKnown RBP16.12■□□□□ 0.17
LIMD2-201ENST00000259006 NYAP1Q6ZVC0 841 aa16.12■□□□□ 0.17
LIMD2-201ENST00000259006 TUBGCP6Q96RT7 1819 aa16.12■□□□□ 0.17
LIMD2-201ENST00000259006 COL15A1P39059 1388 aa16.12■□□□□ 0.17
LIMD2-201ENST00000259006 GNL2Q13823 731 aaKnown RBP16.12■□□□□ 0.17
LIMD2-201ENST00000259006 E4F1Q66K89 784 aaPredicted RBP16.12■□□□□ 0.17
LIMD2-201ENST00000259006 KCNB2Q92953 911 aa16.12■□□□□ 0.17
LIMD2-201ENST00000259006 ERO1AQ96HE7 468 aa16.12■□□□□ 0.17
LIMD2-201ENST00000259006 DBNLQ9UJU6 430 aaKnown RBP16.12■□□□□ 0.17
LIMD2-201ENST00000259006 URI1O94763 535 aaPredicted RBP16.11■□□□□ 0.17
LIMD2-201ENST00000259006 NDUFA8P51970 172 aa16.11■□□□□ 0.17
LIMD2-201ENST00000259006 MRFAP1L1Q96HT8 127 aa16.11■□□□□ 0.17
LIMD2-201ENST00000259006 USP31Q70CQ4 1352 aa16.11■□□□□ 0.17
LIMD2-201ENST00000259006 KIF1CO43896 1103 aaKnown RBP16.11■□□□□ 0.17
LIMD2-201ENST00000259006 MARCKSP29966 332 aaPredicted RBP16.11■□□□□ 0.17
LIMD2-201ENST00000259006 ZC3H6P61129 1189 aaKnown RBP16.11■□□□□ 0.17
LIMD2-201ENST00000259006 MED4Q9NPJ6 270 aa16.11■□□□□ 0.17
LIMD2-201ENST00000259006 ATP1A3P13637 1013 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 SFPQP23246 707 aaKnown RBP eCLIP16.1■□□□□ 0.17
LIMD2-201ENST00000259006 MNS1Q8NEH6 495 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 CABLES1Q8TDN4 633 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 PCDHA7Q9UN72 937 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 TMEM94Q12767 1356 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 XRN1Q8IZH2 1706 aaKnown RBP16.1■□□□□ 0.17
LIMD2-201ENST00000259006 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 ADD1P35611 737 aaKnown RBP16.1■□□□□ 0.17
LIMD2-201ENST00000259006 STK38Q15208 465 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 NBPF11Q86T75 865 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 NSUN7Q8NE18 718 aaKnown RBP16.1■□□□□ 0.17
LIMD2-201ENST00000259006 PPP1R13BQ96KQ4 1090 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 ZSWIM4Q9H7M6 989 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 ZNF335Q9H4Z2 1342 aaPredicted RBP16.1■□□□□ 0.17
LIMD2-201ENST00000259006 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
LIMD2-201ENST00000259006 DIP2AQ14689 1571 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 RGPD8O14715 1765 aaPredicted RBP16.1■□□□□ 0.17
LIMD2-201ENST00000259006 C1orf141Q5JVX7 400 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 MCTP2Q6DN12 878 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 ARMCX5Q6P1M9 558 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 FBXO18Q8NFZ0 1043 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 CCDC34Q96HJ3 373 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 C19orf44Q9H6X5 657 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 CLIC4Q9Y696 253 aa16.1■□□□□ 0.17
LIMD2-201ENST00000259006 OAS2P29728 719 aaKnown RBP16.09■□□□□ 0.17
LIMD2-201ENST00000259006 MAGEA9P43362 315 aa16.09■□□□□ 0.17
LIMD2-201ENST00000259006 FAM160A1Q05DH4 1040 aa16.09■□□□□ 0.17
LIMD2-201ENST00000259006 UBE3BQ7Z3V4 1068 aa16.09■□□□□ 0.17
LIMD2-201ENST00000259006 ZSCAN16Q9H4T2 348 aaPredicted RBP16.09■□□□□ 0.17
LIMD2-201ENST00000259006 NRKQ7Z2Y5 1582 aa16.09■□□□□ 0.17
LIMD2-201ENST00000259006 ITSN1Q15811 1721 aa16.08■□□□□ 0.17
LIMD2-201ENST00000259006 KRT28Q7Z3Y7 464 aa16.08■□□□□ 0.17
LIMD2-201ENST00000259006 ERBB3P21860 1342 aa16.08■□□□□ 0.17
LIMD2-201ENST00000259006 PLEKHG2Q9H7P9 1386 aa16.08■□□□□ 0.17
LIMD2-201ENST00000259006 MON2Q7Z3U7 1717 aa16.08■□□□□ 0.16
LIMD2-201ENST00000259006 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
LIMD2-201ENST00000259006 TIMM10P62072 90 aa16.08■□□□□ 0.16
LIMD2-201ENST00000259006 IGKV5-2P06315 115 aa16.08■□□□□ 0.16
LIMD2-201ENST00000259006 UTP14AQ9BVJ6 771 aaKnown RBP16.08■□□□□ 0.16
LIMD2-201ENST00000259006 SNRKQ9NRH2 765 aa16.08■□□□□ 0.16
LIMD2-201ENST00000259006 COPS6Q7L5N1 327 aa16.07■□□□□ 0.16
LIMD2-201ENST00000259006 PDILTQ8N807 584 aa16.07■□□□□ 0.16
LIMD2-201ENST00000259006 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
LIMD2-201ENST00000259006 GOLGA5Q8TBA6 731 aa16.07■□□□□ 0.16
LIMD2-201ENST00000259006 UBXN4Q92575 508 aa16.07■□□□□ 0.16
LIMD2-201ENST00000259006 RCOR1Q9UKL0 485 aa16.07■□□□□ 0.16
LIMD2-201ENST00000259006 EIF3CLB5ME19 914 aaKnown RBP16.07■□□□□ 0.16
LIMD2-201ENST00000259006 SCP2P22307 547 aa16.07■□□□□ 0.16
LIMD2-201ENST00000259006 PRPF38AQ8NAV1 312 aaKnown RBP16.07■□□□□ 0.16
LIMD2-201ENST00000259006 XAGE3Q8WTP9 111 aa16.07■□□□□ 0.16
LIMD2-201ENST00000259006 EIF3CQ99613 913 aaKnown RBP16.07■□□□□ 0.16
LIMD2-201ENST00000259006 CARD6Q9BX69 1037 aa16.07■□□□□ 0.16
LIMD2-201ENST00000259006 NAT10Q9H0A0 1025 aaKnown RBP16.07■□□□□ 0.16
LIMD2-201ENST00000259006 RAI14Q9P0K7 980 aa16.07■□□□□ 0.16
LIMD2-201ENST00000259006 HMG20BQ9P0W2 317 aa16.07■□□□□ 0.16
LIMD2-201ENST00000259006 RXRAP19793 462 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 MTX1Q13505 466 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 FOXR1Q6PIV2 292 aa16.06■□□□□ 0.16
LIMD2-201ENST00000259006 CCDC85AQ96PX6 553 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms