RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 TMCO3Q6UWJ1 677 aa13.79□□□□□ -0.2
CCNA1-201ENST00000255465 DNAAF4Q8WXU2 420 aa13.79□□□□□ -0.2
CCNA1-201ENST00000255465 SRCAPQ6ZRS2 3230 aa13.79□□□□□ -0.2
CCNA1-201ENST00000255465 COL15A1P39059 1388 aa13.78□□□□□ -0.2
CCNA1-201ENST00000255465 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
CCNA1-201ENST00000255465 MSL3Q8N5Y2 521 aaKnown RBP13.78□□□□□ -0.2
CCNA1-201ENST00000255465 MKL1Q969V6 931 aa13.78□□□□□ -0.2
CCNA1-201ENST00000255465 SGIP1Q9BQI5 828 aa13.78□□□□□ -0.2
CCNA1-201ENST00000255465 ANKRD18BA2A2Z9 1011 aa13.78□□□□□ -0.2
CCNA1-201ENST00000255465 IL6STP40189 918 aaPredicted RBP13.78□□□□□ -0.2
CCNA1-201ENST00000255465 PIP4K2AP48426 406 aaPredicted RBP13.78□□□□□ -0.2
CCNA1-201ENST00000255465 EIF5P55010 431 aaKnown RBP13.78□□□□□ -0.2
CCNA1-201ENST00000255465 ELF2Q15723 593 aa13.78□□□□□ -0.2
CCNA1-201ENST00000255465 MSL1Q68DK7 614 aa13.78□□□□□ -0.2
CCNA1-201ENST00000255465 ANKRD23Q86SG2 305 aa13.78□□□□□ -0.2
CCNA1-201ENST00000255465 WDR63Q8IWG1 891 aa13.78□□□□□ -0.2
CCNA1-201ENST00000255465 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
CCNA1-201ENST00000255465 IL16Q14005 1332 aa13.77□□□□□ -0.2
CCNA1-201ENST00000255465 NRDCO43847 1150 aa13.77□□□□□ -0.21
CCNA1-201ENST00000255465 ST18O60284 1047 aa13.77□□□□□ -0.21
CCNA1-201ENST00000255465 MX1P20591 662 aa13.77□□□□□ -0.21
CCNA1-201ENST00000255465 MVPQ14764 893 aaKnown RBP13.77□□□□□ -0.21
CCNA1-201ENST00000255465 TPD52L1Q16890 204 aaPredicted RBP13.77□□□□□ -0.21
CCNA1-201ENST00000255465 GTF3C6Q969F1 213 aa13.77□□□□□ -0.21
CCNA1-201ENST00000255465 BORCS6Q96GS4 357 aa13.77□□□□□ -0.21
CCNA1-201ENST00000255465 C16orf45Q96MC5 204 aaPredicted RBP13.77□□□□□ -0.21
CCNA1-201ENST00000255465 L2HGDHQ9H9P8 463 aa13.77□□□□□ -0.21
CCNA1-201ENST00000255465 ZDHHC9Q9Y397 364 aa13.77□□□□□ -0.21
CCNA1-201ENST00000255465 NBPF26B4DH59 902 aa13.76□□□□□ -0.21
CCNA1-201ENST00000255465 COQ9O75208 318 aa13.76□□□□□ -0.21
CCNA1-201ENST00000255465 CCDC30Q5VVM6 783 aa13.76□□□□□ -0.21
CCNA1-201ENST00000255465 NYAP1Q6ZVC0 841 aa13.76□□□□□ -0.21
CCNA1-201ENST00000255465 NBPF15Q8N660 670 aa13.76□□□□□ -0.21
CCNA1-201ENST00000255465 SRP68Q9UHB9 627 aaKnown RBP13.76□□□□□ -0.21
CCNA1-201ENST00000255465 ZNF330Q9Y3S2 320 aaPredicted RBP13.76□□□□□ -0.21
CCNA1-201ENST00000255465 USP42Q9H9J4 1324 aaKnown RBP13.76□□□□□ -0.21
CCNA1-201ENST00000255465 GYS1P13807 737 aa13.76□□□□□ -0.21
CCNA1-201ENST00000255465 MCM2P49736 904 aa13.76□□□□□ -0.21
CCNA1-201ENST00000255465 CLCN6P51797 869 aa13.76□□□□□ -0.21
CCNA1-201ENST00000255465 ICA1Q05084 483 aa13.76□□□□□ -0.21
CCNA1-201ENST00000255465 ADCY2Q08462 1091 aa13.76□□□□□ -0.21
CCNA1-201ENST00000255465 MIEF2Q96C03 454 aa13.76□□□□□ -0.21
CCNA1-201ENST00000255465 BCORQ6W2J9 1755 aa13.75□□□□□ -0.21
CCNA1-201ENST00000255465 BRD1O95696 1058 aa13.75□□□□□ -0.21
CCNA1-201ENST00000255465 EIF2S2P20042 333 aaKnown RBP13.75□□□□□ -0.21
CCNA1-201ENST00000255465 NAA30Q147X3 362 aaPredicted RBP13.75□□□□□ -0.21
CCNA1-201ENST00000255465 E2F4Q16254 413 aa13.75□□□□□ -0.21
CCNA1-201ENST00000255465 TADA2BQ86TJ2 420 aa13.75□□□□□ -0.21
CCNA1-201ENST00000255465 TSR2Q969E8 191 aaKnown RBP13.75□□□□□ -0.21
CCNA1-201ENST00000255465 NARFQ9UHQ1 456 aa13.75□□□□□ -0.21
CCNA1-201ENST00000255465 A0A087WZG4 1122 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 ZPR1O75312 459 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 CT47B1P0C2W7 299 aaPredicted RBP13.74□□□□□ -0.21
CCNA1-201ENST00000255465 POLD1P28340 1107 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 CDC25BP30305 580 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 RARSP54136 660 aaKnown RBP13.74□□□□□ -0.21
CCNA1-201ENST00000255465 NUCB1Q02818 461 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 TRAF1Q13077 416 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 PTPN14Q15678 1187 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 CCDC186Q7Z3E2 898 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 REXO1L1PQ8IX06 675 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 NLGN1Q8N2Q7 840 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 GIMAP7Q8NHV1 300 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 SRRTQ9BXP5 876 aaKnown RBP13.74□□□□□ -0.21
CCNA1-201ENST00000255465 GNL3LQ9NVN8 582 aaKnown RBP13.74□□□□□ -0.21
CCNA1-201ENST00000255465 ETAA1Q9NY74 926 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 NSFL1CQ9UNZ2 370 aaKnown RBP13.74□□□□□ -0.21
CCNA1-201ENST00000255465 SCN7AQ01118 1682 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 HOXB7P09629 217 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 TPRNQ4KMQ1 711 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 USPL1Q5W0Q7 1092 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 TTLL5Q6EMB2 1281 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 TEX11Q8IYF3 940 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 FUCA2Q9BTY2 467 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 PPP1R1BQ9UD71 204 aaPredicted RBP13.74□□□□□ -0.21
CCNA1-201ENST00000255465 TBC1D2BQ9UPU7 963 aa13.74□□□□□ -0.21
CCNA1-201ENST00000255465 NUP98P52948 1817 aa13.73□□□□□ -0.21
CCNA1-201ENST00000255465 NEDD9Q14511 834 aa13.73□□□□□ -0.21
CCNA1-201ENST00000255465 CRYMQ14894 314 aa13.73□□□□□ -0.21
CCNA1-201ENST00000255465 MPNDQ8N594 471 aa13.73□□□□□ -0.21
CCNA1-201ENST00000255465 C8orf58Q8NAV2 365 aa13.73□□□□□ -0.21
CCNA1-201ENST00000255465 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
CCNA1-201ENST00000255465 ZNF428Q96B54 188 aa13.73□□□□□ -0.21
CCNA1-201ENST00000255465 FAXDC2Q96IV6 333 aa13.73□□□□□ -0.21
CCNA1-201ENST00000255465 SH3GL3Q99963 347 aa13.73□□□□□ -0.21
CCNA1-201ENST00000255465 ELL2O00472 640 aaPredicted RBP13.72□□□□□ -0.21
CCNA1-201ENST00000255465 MYL6BP14649 208 aa13.72□□□□□ -0.21
CCNA1-201ENST00000255465 OAS2P29728 719 aaKnown RBP13.72□□□□□ -0.21
CCNA1-201ENST00000255465 ST5P78524 1137 aa13.72□□□□□ -0.21
CCNA1-201ENST00000255465 AP1ARQ63HQ0 302 aa13.72□□□□□ -0.21
CCNA1-201ENST00000255465 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
CCNA1-201ENST00000255465 TATDN2Q93075 761 aa13.72□□□□□ -0.21
CCNA1-201ENST00000255465 DDX11Q96FC9 970 aa13.72□□□□□ -0.21
CCNA1-201ENST00000255465 RWDD2BP57060 319 aa13.72□□□□□ -0.21
CCNA1-201ENST00000255465 DHX8Q14562 1220 aaKnown RBP13.72□□□□□ -0.21
CCNA1-201ENST00000255465 PDIA6Q15084 440 aa13.72□□□□□ -0.21
CCNA1-201ENST00000255465 HDGFL1Q5TGJ6 251 aa13.72□□□□□ -0.21
CCNA1-201ENST00000255465 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
CCNA1-201ENST00000255465 INTS4Q96HW7 963 aaKnown RBP13.72□□□□□ -0.21
CCNA1-201ENST00000255465 AFDNP55196 1824 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms