RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ZSCAN25Q6NSZ9 544 aa22.59■■□□□ 1.21
TRIM47-201ENST00000254816 IL27Q8NEV9 243 aa22.59■■□□□ 1.21
TRIM47-201ENST00000254816 DSCC1Q9BVC3 393 aa22.59■■□□□ 1.21
TRIM47-201ENST00000254816 CYP21A2P08686 494 aa22.58■■□□□ 1.21
TRIM47-201ENST00000254816 MMP10P09238 476 aa22.58■■□□□ 1.21
TRIM47-201ENST00000254816 MCM4P33991 863 aa22.58■■□□□ 1.21
TRIM47-201ENST00000254816 AK2P54819 239 aa22.58■■□□□ 1.21
TRIM47-201ENST00000254816 ZSWIM6Q9HCJ5 1215 aa22.58■■□□□ 1.21
TRIM47-201ENST00000254816 ANKIB1Q9P2G1 1089 aa22.58■■□□□ 1.21
TRIM47-201ENST00000254816 RPAP1Q9BWH6 1393 aaPredicted RBP22.57■■□□□ 1.2
TRIM47-201ENST00000254816 MCM2P49736 904 aa22.57■■□□□ 1.2
TRIM47-201ENST00000254816 RBM17Q96I25 401 aaKnown RBP22.57■■□□□ 1.2
TRIM47-201ENST00000254816 GPAA1O43292 621 aa22.57■■□□□ 1.2
TRIM47-201ENST00000254816 TXNRD3Q86VQ6 643 aa22.57■■□□□ 1.2
TRIM47-201ENST00000254816 ZGPATQ8N5A5 531 aaKnown RBP22.57■■□□□ 1.2
TRIM47-201ENST00000254816 MAGEB6Q8N7X4 407 aa22.57■■□□□ 1.2
TRIM47-201ENST00000254816 TM6SF1Q9BZW5 370 aa22.57■■□□□ 1.2
TRIM47-201ENST00000254816 GNL3LQ9NVN8 582 aaKnown RBP22.57■■□□□ 1.2
TRIM47-201ENST00000254816 BRPF3Q9ULD4 1205 aa22.57■■□□□ 1.2
TRIM47-201ENST00000254816 TCRBV5S4A2TA0A5A2 114 aa22.56■■□□□ 1.2
TRIM47-201ENST00000254816 FOXP2O15409 715 aa22.56■■□□□ 1.2
TRIM47-201ENST00000254816 SLC15A2Q16348 729 aa22.56■■□□□ 1.2
TRIM47-201ENST00000254816 RUFY3Q7L099 469 aa22.56■■□□□ 1.2
TRIM47-201ENST00000254816 CYP46A1Q9Y6A2 500 aa22.56■■□□□ 1.2
TRIM47-201ENST00000254816 UBE3CQ15386 1083 aa22.56■■□□□ 1.2
TRIM47-201ENST00000254816 FBXO33Q7Z6M2 555 aa22.56■■□□□ 1.2
TRIM47-201ENST00000254816 PDRG1Q9NUG6 133 aa22.56■■□□□ 1.2
TRIM47-201ENST00000254816 MAP3K12Q12852 859 aa22.55■■□□□ 1.2
TRIM47-201ENST00000254816 TTLL5Q6EMB2 1281 aa22.55■■□□□ 1.2
TRIM47-201ENST00000254816 DEFB132Q7Z7B7 95 aa22.55■■□□□ 1.2
TRIM47-201ENST00000254816 TCEANC2Q96MN5 208 aa22.55■■□□□ 1.2
TRIM47-201ENST00000254816 GPR101Q96P66 508 aaPredicted RBP22.55■■□□□ 1.2
TRIM47-201ENST00000254816 ABCF2Q9UG63 623 aa22.55■■□□□ 1.2
TRIM47-201ENST00000254816 PARP3Q9Y6F1 533 aa22.55■■□□□ 1.2
TRIM47-201ENST00000254816 CACNA1SQ13698 1873 aa22.55■■□□□ 1.2
TRIM47-201ENST00000254816 TSGA10IPQ3SY00 556 aa22.54■■□□□ 1.2
TRIM47-201ENST00000254816 LRP2BPQ9P2M1 347 aa22.54■■□□□ 1.2
TRIM47-201ENST00000254816 KLRG2A4D1S0 409 aaPredicted RBP22.54■■□□□ 1.2
TRIM47-201ENST00000254816 PSMA5P28066 241 aa22.54■■□□□ 1.2
TRIM47-201ENST00000254816 HIBADHP31937 336 aaKnown RBP22.54■■□□□ 1.2
TRIM47-201ENST00000254816 COL11A2P13942 1736 aaPredicted RBP22.53■■□□□ 1.2
TRIM47-201ENST00000254816 GPSM2P81274 684 aa22.53■■□□□ 1.2
TRIM47-201ENST00000254816 STOX1Q6ZVD7 989 aa22.53■■□□□ 1.2
TRIM47-201ENST00000254816 STK32BQ9NY57 414 aa22.53■■□□□ 1.2
TRIM47-201ENST00000254816 IRS2Q9Y4H2 1338 aa22.53■■□□□ 1.2
TRIM47-201ENST00000254816 HOXA10P31260 410 aaPredicted RBP22.52■■□□□ 1.2
TRIM47-201ENST00000254816 BLOC1S2Q6QNY1 142 aa22.52■■□□□ 1.2
TRIM47-201ENST00000254816 BRIP1Q9BX63 1249 aa22.52■■□□□ 1.2
TRIM47-201ENST00000254816 XDHP47989 1333 aa22.52■■□□□ 1.2
TRIM47-201ENST00000254816 DENND2AQ9ULE3 1009 aa22.52■■□□□ 1.2
TRIM47-201ENST00000254816 NSFL1CQ9UNZ2 370 aaKnown RBP22.52■■□□□ 1.2
TRIM47-201ENST00000254816 QSER1Q2KHR3 1735 aa22.51■■□□□ 1.19
TRIM47-201ENST00000254816 FGAP02671 866 aa22.51■■□□□ 1.19
TRIM47-201ENST00000254816 RPS6KB1P23443 525 aa22.51■■□□□ 1.19
TRIM47-201ENST00000254816 SF3B2Q13435 895 aaKnown RBP22.51■■□□□ 1.19
TRIM47-201ENST00000254816 NEK1Q96PY6 1258 aa22.51■■□□□ 1.19
TRIM47-201ENST00000254816 CRAMP1Q96RY5 1269 aa22.51■■□□□ 1.19
TRIM47-201ENST00000254816 JAG2Q9Y219 1238 aa22.51■■□□□ 1.19
TRIM47-201ENST00000254816 LEMD3Q9Y2U8 911 aa22.51■■□□□ 1.19
TRIM47-201ENST00000254816 LARGE1O95461 756 aa22.5■■□□□ 1.19
TRIM47-201ENST00000254816 CUL4AQ13619 759 aa22.5■■□□□ 1.19
TRIM47-201ENST00000254816 KRT32Q14532 448 aa22.5■■□□□ 1.19
TRIM47-201ENST00000254816 AIDAQ96BJ3 306 aa22.5■■□□□ 1.19
TRIM47-201ENST00000254816 RAI14Q9P0K7 980 aa22.5■■□□□ 1.19
TRIM47-201ENST00000254816 BBOX1O75936 387 aa22.5■■□□□ 1.19
TRIM47-201ENST00000254816 HAND2P61296 217 aa22.5■■□□□ 1.19
TRIM47-201ENST00000254816 CHAF1AQ13111 956 aaPredicted RBP22.5■■□□□ 1.19
TRIM47-201ENST00000254816 LIMCH1Q9UPQ0 1083 aa22.5■■□□□ 1.19
TRIM47-201ENST00000254816 PDGFDQ9GZP0 370 aaPredicted RBP22.49■■□□□ 1.19
TRIM47-201ENST00000254816 ARMT1Q9H993 441 aa22.49■■□□□ 1.19
TRIM47-201ENST00000254816 CIZ1Q9ULV3 898 aaPredicted RBP22.49■■□□□ 1.19
TRIM47-201ENST00000254816 LRRC37AA6NMS7 1700 aa22.48■■□□□ 1.19
TRIM47-201ENST00000254816 MBD4O95243 580 aa22.48■■□□□ 1.19
TRIM47-201ENST00000254816 BAG6P46379 1132 aa22.48■■□□□ 1.19
TRIM47-201ENST00000254816 TNPO1Q92973 898 aaKnown RBP22.48■■□□□ 1.19
TRIM47-201ENST00000254816 STRBPQ96SI9 672 aaKnown RBP22.48■■□□□ 1.19
TRIM47-201ENST00000254816 GZF1Q9H116 711 aaPredicted RBP22.48■■□□□ 1.19
TRIM47-201ENST00000254816 UFL1O94874 794 aa22.48■■□□□ 1.19
TRIM47-201ENST00000254816 APPP05067 770 aa22.48■■□□□ 1.19
TRIM47-201ENST00000254816 SRGNP10124 158 aa22.48■■□□□ 1.19
TRIM47-201ENST00000254816 ADGRA1Q86SQ6 560 aa22.48■■□□□ 1.19
TRIM47-201ENST00000254816 MIGA1Q8NAN2 632 aa22.48■■□□□ 1.19
TRIM47-201ENST00000254816 CCDC88AQ3V6T2 1871 aa22.48■■□□□ 1.19
TRIM47-201ENST00000254816 E7EWF7 191 aa22.47■■□□□ 1.19
TRIM47-201ENST00000254816 PPEF1O14829 653 aaPredicted RBP22.47■■□□□ 1.19
TRIM47-201ENST00000254816 SEMA3EO15041 775 aa22.47■■□□□ 1.19
TRIM47-201ENST00000254816 CYP7A1P22680 504 aa22.47■■□□□ 1.19
TRIM47-201ENST00000254816 CTNNA3Q9UI47 895 aa22.46■■□□□ 1.19
TRIM47-201ENST00000254816 LTBP1Q14766 1721 aa22.46■■□□□ 1.19
TRIM47-201ENST00000254816 PDE6BP35913 854 aa22.46■■□□□ 1.19
TRIM47-201ENST00000254816 PKP1Q13835 747 aa22.46■■□□□ 1.19
TRIM47-201ENST00000254816 TOB2Q14106 344 aaPredicted RBP22.46■■□□□ 1.19
TRIM47-201ENST00000254816 IMMTQ16891 758 aaKnown RBP22.46■■□□□ 1.19
TRIM47-201ENST00000254816 OLFM4Q6UX06 510 aa22.46■■□□□ 1.19
TRIM47-201ENST00000254816 LCORLQ8N3X6 602 aa22.46■■□□□ 1.19
TRIM47-201ENST00000254816 LRRC2Q9BYS8 371 aa22.46■■□□□ 1.19
TRIM47-201ENST00000254816 RTN4Q9NQC3 1192 aaKnown RBP22.46■■□□□ 1.19
TRIM47-201ENST00000254816 GGA1Q9UJY5 639 aa22.46■■□□□ 1.19
TRIM47-201ENST00000254816 RAB3GAP1Q15042 981 aa22.45■■□□□ 1.18
TRIM47-201ENST00000254816 TPCN1Q9ULQ1 816 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms