RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 PPP2R3AQ06190 1150 aa23.63■■□□□ 1.37
RARA-201ENST00000254066 TTC31Q49AM3 519 aaPredicted RBP23.63■■□□□ 1.37
RARA-201ENST00000254066 HSP90AB2PQ58FF8 381 aa23.63■■□□□ 1.37
RARA-201ENST00000254066 ARHGAP6O43182 974 aa23.62■■□□□ 1.37
RARA-201ENST00000254066 LONRF2Q1L5Z9 754 aa23.62■■□□□ 1.37
RARA-201ENST00000254066 CCDC34Q96HJ3 373 aa23.62■■□□□ 1.37
RARA-201ENST00000254066 USP28Q96RU2 1077 aa23.62■■□□□ 1.37
RARA-201ENST00000254066 POTEB2H3BUK9 544 aa23.62■■□□□ 1.37
RARA-201ENST00000254066 NBPF7P0C2Y1 421 aaPredicted RBP23.62■■□□□ 1.37
RARA-201ENST00000254066 TXLNAP40222 546 aa23.62■■□□□ 1.37
RARA-201ENST00000254066 CHMP4CQ96CF2 233 aa23.62■■□□□ 1.37
RARA-201ENST00000254066 DDX11Q96FC9 970 aa23.62■■□□□ 1.37
RARA-201ENST00000254066 TCEANC2Q96MN5 208 aa23.62■■□□□ 1.37
RARA-201ENST00000254066 ALDH1L1O75891 902 aa23.61■■□□□ 1.37
RARA-201ENST00000254066 ME1P48163 572 aa23.61■■□□□ 1.37
RARA-201ENST00000254066 FANCCQ00597 558 aa23.61■■□□□ 1.37
RARA-201ENST00000254066 COL9A3Q14050 684 aaPredicted RBP23.61■■□□□ 1.37
RARA-201ENST00000254066 NCAPHQ15003 741 aa23.61■■□□□ 1.37
RARA-201ENST00000254066 NEK1Q96PY6 1258 aa23.61■■□□□ 1.37
RARA-201ENST00000254066 NCAPGQ9BPX3 1015 aa23.61■■□□□ 1.37
RARA-201ENST00000254066 JRKLQ9Y4A0 524 aa23.61■■□□□ 1.37
RARA-201ENST00000254066 FANCGO15287 622 aa23.61■■□□□ 1.37
RARA-201ENST00000254066 CEBPZQ03701 1054 aaKnown RBP23.61■■□□□ 1.37
RARA-201ENST00000254066 DPCR1Q3MIW9 517 aa23.61■■□□□ 1.37
RARA-201ENST00000254066 BEND3Q5T5X7 828 aa23.61■■□□□ 1.37
RARA-201ENST00000254066 VWA3AA6NCI4 1184 aa23.6■■□□□ 1.37
RARA-201ENST00000254066 PFKFB2O60825 505 aa23.6■■□□□ 1.37
RARA-201ENST00000254066 PPM1EQ8WY54 764 aa23.6■■□□□ 1.37
RARA-201ENST00000254066 EIF3JO75822 258 aaKnown RBP23.6■■□□□ 1.37
RARA-201ENST00000254066 MYCBPQ99417 103 aaPredicted RBP23.6■■□□□ 1.37
RARA-201ENST00000254066 FMN2Q9NZ56 1722 aa23.6■■□□□ 1.37
RARA-201ENST00000254066 RTEL1Q9NZ71 1219 aa23.6■■□□□ 1.37
RARA-201ENST00000254066 COL16A1Q07092 1604 aaPredicted RBP23.59■■□□□ 1.37
RARA-201ENST00000254066 MST1RQ04912 1400 aa23.59■■□□□ 1.37
RARA-201ENST00000254066 HDGFL1Q5TGJ6 251 aa23.59■■□□□ 1.37
RARA-201ENST00000254066 APOBRQ0VD83 1088 aa23.59■■□□□ 1.37
RARA-201ENST00000254066 TMED8Q6PL24 325 aaPredicted RBP23.59■■□□□ 1.37
RARA-201ENST00000254066 PPP2R2CQ9Y2T4 447 aa23.59■■□□□ 1.37
RARA-201ENST00000254066 A0A0D9SFI3 127 aa23.58■■□□□ 1.37
RARA-201ENST00000254066 GNAT3A8MTJ3 354 aa23.58■■□□□ 1.37
RARA-201ENST00000254066 H3BQF6 201 aa23.58■■□□□ 1.37
RARA-201ENST00000254066 USP5P45974 858 aa23.58■■□□□ 1.37
RARA-201ENST00000254066 NECTIN2Q92692 538 aa23.58■■□□□ 1.37
RARA-201ENST00000254066 UTP14AQ9BVJ6 771 aaKnown RBP23.58■■□□□ 1.37
RARA-201ENST00000254066 SBNO1A3KN83 1393 aa23.58■■□□□ 1.36
RARA-201ENST00000254066 GNL2Q13823 731 aaKnown RBP23.58■■□□□ 1.36
RARA-201ENST00000254066 TAF7Q15545 349 aaPredicted RBP23.58■■□□□ 1.36
RARA-201ENST00000254066 HDXQ7Z353 690 aa23.58■■□□□ 1.36
RARA-201ENST00000254066 CEP120Q8N960 986 aa23.58■■□□□ 1.36
RARA-201ENST00000254066 DNAAF4Q8WXU2 420 aa23.58■■□□□ 1.36
RARA-201ENST00000254066 PCDHA7Q9UN72 937 aa23.58■■□□□ 1.36
RARA-201ENST00000254066 IGSF1Q8N6C5 1336 aa23.57■■□□□ 1.36
RARA-201ENST00000254066 A0A087WWV3 80 aa23.57■■□□□ 1.36
RARA-201ENST00000254066 GYS2P54840 703 aa23.57■■□□□ 1.36
RARA-201ENST00000254066 SCRN1Q12765 414 aa23.57■■□□□ 1.36
RARA-201ENST00000254066 Q6ZUG5 572 aa23.57■■□□□ 1.36
RARA-201ENST00000254066 BRINP3Q76B58 766 aa23.57■■□□□ 1.36
RARA-201ENST00000254066 NSUN7Q8NE18 718 aaKnown RBP23.57■■□□□ 1.36
RARA-201ENST00000254066 CARD10Q9BWT7 1032 aa23.57■■□□□ 1.36
RARA-201ENST00000254066 ROBO2Q9HCK4 1378 aa23.57■■□□□ 1.36
RARA-201ENST00000254066 TAF5LO75529 589 aa23.57■■□□□ 1.36
RARA-201ENST00000254066 AACSQ86V21 672 aa23.57■■□□□ 1.36
RARA-201ENST00000254066 PHAXQ9H814 394 aaKnown RBP23.57■■□□□ 1.36
RARA-201ENST00000254066 CPP00450 1065 aa23.56■■□□□ 1.36
RARA-201ENST00000254066 SLC3A2P08195 630 aaKnown RBP23.56■■□□□ 1.36
RARA-201ENST00000254066 HMGB1P09429 215 aaKnown RBP23.56■■□□□ 1.36
RARA-201ENST00000254066 HOXB7P09629 217 aa23.56■■□□□ 1.36
RARA-201ENST00000254066 TUBB2AQ13885 445 aa23.56■■□□□ 1.36
RARA-201ENST00000254066 SUGP1Q8IWZ8 645 aaKnown RBP23.56■■□□□ 1.36
RARA-201ENST00000254066 TUBB2BQ9BVA1 445 aa23.56■■□□□ 1.36
RARA-201ENST00000254066 CORO7P57737 925 aa23.55■■□□□ 1.36
RARA-201ENST00000254066 VSTM4Q8IW00 320 aa23.55■■□□□ 1.36
RARA-201ENST00000254066 RAB21Q9UL25 225 aa23.55■■□□□ 1.36
RARA-201ENST00000254066 TAF6LQ9Y6J9 622 aa23.55■■□□□ 1.36
RARA-201ENST00000254066 TECPR2O15040 1411 aa23.55■■□□□ 1.36
RARA-201ENST00000254066 ERLIN1O75477 346 aa23.55■■□□□ 1.36
RARA-201ENST00000254066 KCNG4Q8TDN1 519 aa23.55■■□□□ 1.36
RARA-201ENST00000254066 FSD1Q9BTV5 496 aa23.55■■□□□ 1.36
RARA-201ENST00000254066 U3KPZ7 1027 aaPredicted RBP23.55■■□□□ 1.36
RARA-201ENST00000254066 NEDD4P46934 1319 aa23.55■■□□□ 1.36
RARA-201ENST00000254066 ATP2B1P20020 1258 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 UBASH3AP57075 661 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 GNG11P61952 73 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 TMEM139Q8IV31 216 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 PLCD4Q9BRC7 762 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 FTOQ9C0B1 505 aaKnown RBP eCLIP23.54■■□□□ 1.36
RARA-201ENST00000254066 RFX7Q2KHR2 1363 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.54■■□□□ 1.36
RARA-201ENST00000254066 EIF3CLB5ME19 914 aaKnown RBP23.54■■□□□ 1.36
RARA-201ENST00000254066 STX10O60499 249 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 YEATS4O95619 227 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 TUBBP07437 444 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 KIFC2Q96AC6 838 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 EIF3CQ99613 913 aaKnown RBP23.54■■□□□ 1.36
RARA-201ENST00000254066 DEF6Q9H4E7 631 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 FLT4P35916 1363 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 SPATA31A6Q5VVP1 1343 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 NCAPD2Q15021 1401 aa23.54■■□□□ 1.36
RARA-201ENST00000254066 CLSTN1O94985 981 aa23.53■■□□□ 1.36
RARA-201ENST00000254066 NDUFA8P51970 172 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms