RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 SH3TC1Q8TE82 1336 aa14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 CTDNEP1O95476 244 aa14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 CACTINQ8WUQ7 758 aaKnown RBP14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 MYL10Q9BUA6 226 aa14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 ASAP1Q9ULH1 1129 aa14.69□□□□□ -0.06
RAB3IP-201ENST00000247833 STARD3NLO95772 234 aa14.68□□□□□ -0.06
RAB3IP-201ENST00000247833 SKILP12757 684 aa14.68□□□□□ -0.06
RAB3IP-201ENST00000247833 HSP90AA4PQ58FG1 418 aa14.68□□□□□ -0.06
RAB3IP-201ENST00000247833 AIDAQ96BJ3 306 aa14.68□□□□□ -0.06
RAB3IP-201ENST00000247833 PCDHA7Q9UN72 937 aa14.68□□□□□ -0.06
RAB3IP-201ENST00000247833 CLIC4Q9Y696 253 aa14.68□□□□□ -0.06
RAB3IP-201ENST00000247833 SPTLC2O15270 562 aa14.68□□□□□ -0.06
RAB3IP-201ENST00000247833 PHKBQ93100 1093 aa14.68□□□□□ -0.06
RAB3IP-201ENST00000247833 SLC3A2P08195 630 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 AIFM3Q96NN9 605 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 ITGA6P23229 1130 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 ADD1P35611 737 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 CCDC144BQ3MJ40 725 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 TDRD7Q8NHU6 1098 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 IQSEC3Q9UPP2 1182 aaPredicted RBP14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 CARMIL3Q8ND23 1372 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 ANKRD18BA2A2Z9 1011 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 CCDC69A6NI79 296 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 B4E1Z4 1266 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 METAP2P50579 478 aaKnown RBP eCLIP14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 CASP7P55210 303 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 TCIRG1Q13488 830 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 LRP10Q7Z4F1 713 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 HOMER1Q86YM7 354 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 RCOR1Q9UKL0 485 aa14.67□□□□□ -0.06
RAB3IP-201ENST00000247833 LMOD1P29536 600 aaPredicted RBP14.66□□□□□ -0.06
RAB3IP-201ENST00000247833 NDUFA8P51970 172 aa14.66□□□□□ -0.06
RAB3IP-201ENST00000247833 TMC6Q7Z403 805 aa14.66□□□□□ -0.06
RAB3IP-201ENST00000247833 SMARCC2Q8TAQ2 1214 aa14.66□□□□□ -0.06
RAB3IP-201ENST00000247833 APPBP2Q92624 585 aa14.66□□□□□ -0.06
RAB3IP-201ENST00000247833 ALG1Q9BT22 464 aa14.66□□□□□ -0.06
RAB3IP-201ENST00000247833 ALDH8A1Q9H2A2 487 aaPredicted RBP14.66□□□□□ -0.06
RAB3IP-201ENST00000247833 PTPN14Q15678 1187 aa14.66□□□□□ -0.06
RAB3IP-201ENST00000247833 SNAP23O00161 211 aa14.65□□□□□ -0.06
RAB3IP-201ENST00000247833 ZFYP08048 801 aaPredicted RBP14.65□□□□□ -0.06
RAB3IP-201ENST00000247833 NUP133Q8WUM0 1156 aa14.65□□□□□ -0.06
RAB3IP-201ENST00000247833 ZNF274Q96GC6 653 aaPredicted RBP14.65□□□□□ -0.06
RAB3IP-201ENST00000247833 GREM2Q9H772 168 aa14.65□□□□□ -0.06
RAB3IP-201ENST00000247833 EXOSC10Q01780 885 aaKnown RBP14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 MPHOSPH8Q99549 860 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 NAPBQ9H115 298 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 SPTLC3Q9NUV7 552 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 DENND2AQ9ULE3 1009 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 OVOS2A0A0G2JMS6 1433 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 MED1Q15648 1581 aaPredicted RBP14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 IRS4O14654 1257 aaPredicted RBP14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 SERPINC1P01008 464 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 CEP135Q66GS9 1140 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 ZKSCAN3Q9BRR0 538 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 IFNKQ9P0W0 207 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 GOLGA8AA7E2F4 631 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 ERVV-2B6SEH9 535 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 IFIT3O14879 490 aaKnown RBP14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 CAVIN2O95810 425 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 TMEM67Q5HYA8 995 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 KCNG4Q8TDN1 519 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 PKNOX2Q96KN3 472 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 SLC26A6Q9BXS9 759 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 INCENPQ9NQS7 918 aa14.64□□□□□ -0.07
RAB3IP-201ENST00000247833 TDO2P48775 406 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 MYSM1Q5VVJ2 828 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 FAM177A1Q8N128 213 aaPredicted RBP14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 GPR108Q9NPR9 543 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 KDM3BQ7LBC6 1761 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 SPATA31A3Q5VYP0 1347 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 PTPN21Q16825 1174 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 DPCR1Q3MIW9 517 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 SPECC1Q5M775 1068 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 IGSF3O75054 1194 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 U2AF2P26368 475 aaKnown RBP eCLIP14.63□□□□□ -0.072e-6■■□□□ 12.9
RAB3IP-201ENST00000247833 NAA30Q147X3 362 aaPredicted RBP14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 HLFQ16534 295 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 CREBRFQ8IUR6 639 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 ABCF2Q9UG63 623 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 WDR17Q8IZU2 1322 aa14.63□□□□□ -0.07
RAB3IP-201ENST00000247833 IARSP41252 1262 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 PDILTQ8N807 584 aa14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 FBXO18Q8NFZ0 1043 aa14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 ZNF202O95125 648 aa14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 FDPSP14324 419 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 SYKP43405 635 aa14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 CFAP100Q494V2 611 aa14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 PLA2G4DQ86XP0 818 aa14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 CCDC94Q9BW85 323 aaPredicted RBP14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 CDK11BP21127 795 aaKnown RBP14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 SFPQP23246 707 aaKnown RBP eCLIP14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 PHKA1P46020 1223 aa14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 SAFBQ15424 915 aaKnown RBP eCLIP14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 ANO1Q5XXA6 986 aa14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 ZNF532Q9HCE3 1301 aa14.62□□□□□ -0.07
RAB3IP-201ENST00000247833 MINDY4BA8MYZ0 360 aa14.61□□□□□ -0.07
RAB3IP-201ENST00000247833 ZBTB43O43298 467 aa14.61□□□□□ -0.07
RAB3IP-201ENST00000247833 MCAMP43121 646 aa14.61□□□□□ -0.07
RAB3IP-201ENST00000247833 LRRC8AQ8IWT6 810 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms