RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 JAKMIP3Q5VZ66 844 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 CBFA2T2O43439 604 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 ADD1P35611 737 aaKnown RBP13.32□□□□□ -0.28
SOX9-201ENST00000245479 ZNF75DP51815 510 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 MCM6Q14566 821 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 CLEC17AQ6ZS10 378 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 GPIHBP1Q8IV16 184 aa13.32□□□□□ -0.28
SOX9-201ENST00000245479 PRC1O43663 620 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 LMOD1P29536 600 aaPredicted RBP13.31□□□□□ -0.28
SOX9-201ENST00000245479 CASQ1P31415 396 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 WWC3Q9ULE0 1092 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 CYP2E1P05181 493 aaPredicted RBP13.31□□□□□ -0.28
SOX9-201ENST00000245479 GNG11P61952 73 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 SCRN1Q12765 414 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 ZSCAN25Q6NSZ9 544 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 AOPEPQ8N6M6 819 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 LEO1Q8WVC0 666 aaPredicted RBP13.31□□□□□ -0.28
SOX9-201ENST00000245479 MAP4K1Q92918 833 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 NBPF26B4DH59 902 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 FAM193AP78312 1265 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 NBPF14Q5TI25 921 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 NBPF10Q6P3W6 841 aaKnown RBP13.31□□□□□ -0.28
SOX9-201ENST00000245479 NBPF15Q8N660 670 aa13.31□□□□□ -0.28
SOX9-201ENST00000245479 IPO4Q8TEX9 1081 aaKnown RBP13.31□□□□□ -0.28
SOX9-201ENST00000245479 PREX1Q8TCU6 1659 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 STARD3NLO95772 234 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 TOP1P11387 765 aaKnown RBP13.3□□□□□ -0.28
SOX9-201ENST00000245479 AKAP17AQ02040 695 aaKnown RBP13.3□□□□□ -0.28
SOX9-201ENST00000245479 CTDSPL2Q05D32 466 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 SCARF1Q14162 830 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 NECTIN1Q15223 517 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 CADPS2Q86UW7 1296 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 CPLX3Q8WVH0 158 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 USP28Q96RU2 1077 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 SLC26A6Q9BXS9 759 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 TMEM94Q12767 1356 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 RIMS1Q86UR5 1692 aaKnown RBP13.3□□□□□ -0.28
SOX9-201ENST00000245479 KIAA1210Q9ULL0 1709 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 CERS3Q8IU89 383 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 UIMC1Q96RL1 719 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 IFIT3O14879 490 aaKnown RBP13.3□□□□□ -0.28
SOX9-201ENST00000245479 RANBP6O60518 1105 aaKnown RBP13.3□□□□□ -0.28
SOX9-201ENST00000245479 COBLO75128 1261 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 ITGA6P23229 1130 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 CAGE1Q8TC20 777 aa13.3□□□□□ -0.28
SOX9-201ENST00000245479 CAPN2P17655 700 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 KRT32Q14532 448 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 NAA30Q147X3 362 aaPredicted RBP13.29□□□□□ -0.28
SOX9-201ENST00000245479 HLFQ16534 295 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 NAPBQ9H115 298 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 RSPH14Q9UHP6 348 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 EYA2O00167 538 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 DHX16O60231 1041 aaKnown RBP13.29□□□□□ -0.28
SOX9-201ENST00000245479 IL2RBP14784 551 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 ERCC6LQ2NKX8 1250 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 CCDC150Q8NCX0 1101 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 GREM2Q9H772 168 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 IRS4O14654 1257 aaPredicted RBP13.29□□□□□ -0.28
SOX9-201ENST00000245479 GOLGA8FQ08AF8 430 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 NCBP1Q09161 790 aaKnown RBP13.29□□□□□ -0.28
SOX9-201ENST00000245479 GOLGA8DPQ0D2H9 430 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 STAMQ92783 540 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 OSBP2Q969R2 916 aa13.29□□□□□ -0.28
SOX9-201ENST00000245479 KDRP35968 1356 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 DLC1Q96QB1 1528 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 E7EWF7 191 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 HSPD1P10809 573 aaKnown RBP13.28□□□□□ -0.28
SOX9-201ENST00000245479 DHX32Q7L7V1 743 aaKnown RBP13.28□□□□□ -0.28
SOX9-201ENST00000245479 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 USP8P40818 1118 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 TOB2Q14106 344 aaPredicted RBP13.28□□□□□ -0.28
SOX9-201ENST00000245479 PDIA6Q15084 440 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 KIF4BQ2VIQ3 1234 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.28□□□□□ -0.28
SOX9-201ENST00000245479 KBTBD3Q8NAB2 608 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 ANKRD20A12PQ8NF67 263 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 NEK11Q8NG66 645 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 TTC14Q96N46 770 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 PUS7LQ9H0K6 701 aaKnown RBP13.28□□□□□ -0.28
SOX9-201ENST00000245479 UBE2Q2LH0YL09 131 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 PPFIBP1Q86W92 1011 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 MAGEB6Q8N7X4 407 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 ARMT1Q9H993 441 aa13.28□□□□□ -0.28
SOX9-201ENST00000245479 M0R2C6 588 aa13.27□□□□□ -0.28
SOX9-201ENST00000245479 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.27□□□□□ -0.28
SOX9-201ENST00000245479 PATL2C9JE40 543 aaKnown RBP13.27□□□□□ -0.29
SOX9-201ENST00000245479 RNF113AO15541 343 aaKnown RBP13.27□□□□□ -0.29
SOX9-201ENST00000245479 STOX1Q6ZVD7 989 aa13.27□□□□□ -0.29
SOX9-201ENST00000245479 SEC31BQ9NQW1 1179 aa13.27□□□□□ -0.29
SOX9-201ENST00000245479 CFAP74Q9C0B2 1584 aa13.27□□□□□ -0.29
SOX9-201ENST00000245479 ANKRD18BA2A2Z9 1011 aa13.27□□□□□ -0.29
SOX9-201ENST00000245479 GPAA1O43292 621 aa13.27□□□□□ -0.29
SOX9-201ENST00000245479 FGAP02671 866 aa13.27□□□□□ -0.29
SOX9-201ENST00000245479 IBSPP21815 317 aaPredicted RBP13.27□□□□□ -0.29
SOX9-201ENST00000245479 IL15P40933 162 aaPredicted RBP13.27□□□□□ -0.29
SOX9-201ENST00000245479 TERF2Q15554 542 aa13.27□□□□□ -0.29
SOX9-201ENST00000245479 TMEM67Q5HYA8 995 aa13.27□□□□□ -0.29
SOX9-201ENST00000245479 EEF2KMTQ96G04 330 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms