RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 PARP10Q53GL7 1025 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 KDM5AP29375 1690 aaKnown RBP8.17□□□□□ -1.1
CPS1-201ENST00000233072 SPTLC2O15270 562 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 HSPA4P34932 840 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 HAND2P61296 217 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 RUFY3Q7L099 469 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 IQCDQ96DY2 449 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 ELP1O95163 1332 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 BIN1O00499 593 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 ALDH3A1P30838 453 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 SNX16P57768 344 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 TPTE2Q6XPS3 522 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 ABCA5Q8WWZ7 1642 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 ADGRL2O95490 1459 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 ZNF608Q9ULD9 1512 aaPredicted RBP8.16□□□□□ -1.1
CPS1-201ENST00000233072 PLCD1P51178 756 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 DZIP3Q86Y13 1208 aaKnown RBP8.16□□□□□ -1.1
CPS1-201ENST00000233072 KRT222Q8N1A0 295 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 CCDC82Q8N4S0 544 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 NAP1L3Q99457 506 aaPredicted RBP8.16□□□□□ -1.1
CPS1-201ENST00000233072 LLPHQ9BRT6 129 aaKnown RBP8.16□□□□□ -1.1
CPS1-201ENST00000233072 TRMT1Q9NXH9 659 aaKnown RBP8.16□□□□□ -1.1
CPS1-201ENST00000233072 SBNO1A3KN83 1393 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 POLD1P28340 1107 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 MPNDQ8N594 471 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 TNNC1P63316 161 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 EIF4A2Q14240 407 aaKnown RBP8.16□□□□□ -1.1
CPS1-201ENST00000233072 PPP2R5BQ15173 497 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 HS2ST1Q7LGA3 356 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 UBE2Q2Q8WVN8 375 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 KIFAP3Q92845 792 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 CSRNP2Q9H175 543 aa8.16□□□□□ -1.1
CPS1-201ENST00000233072 VAV2P52735 878 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 TTC6Q86TZ1 520 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 USP48Q86UV5 1035 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 SMC5Q8IY18 1101 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 TMEM87BQ96K49 555 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 EXOC7Q9UPT5 735 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 MRVI1Q9Y6F6 885 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 CALUO43852 315 aaPredicted RBP8.15□□□□□ -1.1
CPS1-201ENST00000233072 PARP1P09874 1014 aaKnown RBP8.15□□□□□ -1.1
CPS1-201ENST00000233072 KIF5AQ12840 1032 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 CNGA4Q8IV77 575 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 CCDC65Q8IXS2 484 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 LZTS2Q9BRK4 669 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 MTRF1LQ9UGC7 380 aaKnown RBP8.15□□□□□ -1.1
CPS1-201ENST00000233072 NIP7Q9Y221 180 aaKnown RBP eCLIP8.15□□□□□ -1.1
CPS1-201ENST00000233072 ARHGEF10O15013 1369 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 C11orf95C9JLR9 678 aaPredicted RBP8.15□□□□□ -1.1
CPS1-201ENST00000233072 DDB1Q16531 1140 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 SLC9C2Q5TAH2 1124 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 COPS6Q7L5N1 327 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 CROCCP2Q86T23 111 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 DCTPP1Q9H773 170 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 SNRKQ9NRH2 765 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 TFIP11Q9UBB9 837 aaKnown RBP8.15□□□□□ -1.1
CPS1-201ENST00000233072 CNPY2Q9Y2B0 182 aa8.15□□□□□ -1.1
CPS1-201ENST00000233072 ATP7AQ04656 1500 aa8.15□□□□□ -1.11
CPS1-201ENST00000233072 GAS8O95995 478 aa8.15□□□□□ -1.11
CPS1-201ENST00000233072 MRPS9P82933 396 aaKnown RBP8.15□□□□□ -1.11
CPS1-201ENST00000233072 DHX32Q7L7V1 743 aaKnown RBP8.15□□□□□ -1.11
CPS1-201ENST00000233072 ARFGAP3Q9NP61 516 aa8.15□□□□□ -1.11
CPS1-201ENST00000233072 MTUS1Q9ULD2 1270 aa8.15□□□□□ -1.11
CPS1-201ENST00000233072 RTCBQ9Y3I0 505 aaKnown RBP8.15□□□□□ -1.11
CPS1-201ENST00000233072 IGHDP01880 384 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 LDHBP07195 334 aaKnown RBP8.14□□□□□ -1.11
CPS1-201ENST00000233072 SEL1L2Q5TEA6 688 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 CREB3L3Q68CJ9 461 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 STX8Q9UNK0 236 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 CEP85Q6P2H3 762 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 ARFGAP2Q8N6H7 521 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 RAB3IL1Q8TBN0 382 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 CCDC94Q9BW85 323 aaPredicted RBP8.14□□□□□ -1.11
CPS1-201ENST00000233072 ANAPC4Q9UJX5 808 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 EPB41P11171 864 aaKnown RBP8.14□□□□□ -1.11
CPS1-201ENST00000233072 SYT1P21579 422 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 DNA2P51530 1060 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 CHMP4BP1P59074 171 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 HAUS3Q68CZ6 603 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 IQUBQ8NA54 791 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 SUPT20HQ8NEM7 779 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 RNMTO43148 476 aaKnown RBP8.14□□□□□ -1.11
CPS1-201ENST00000233072 SETSIPP0DME0 302 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 SKILP12757 684 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 AFMP43652 599 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 LMBR1LQ6UX01 489 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 DTHD1Q6ZMT9 781 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 AOPEPQ8N6M6 819 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 GABPB2Q8TAK5 448 aaPredicted RBP8.14□□□□□ -1.11
CPS1-201ENST00000233072 MEIS3Q99687 375 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 HAUS2Q9NVX0 235 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 FAM83GA6ND36 823 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 A6NNZ2 444 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 IRS4O14654 1257 aaPredicted RBP8.14□□□□□ -1.11
CPS1-201ENST00000233072 IBSPP21815 317 aaPredicted RBP8.14□□□□□ -1.11
CPS1-201ENST00000233072 RAB3GAP1Q15042 981 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 TUBB8Q3ZCM7 444 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 SIRT1Q96EB6 747 aa8.14□□□□□ -1.11
CPS1-201ENST00000233072 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.14□□□□□ -1.11
CPS1-201ENST00000233072 SLU7O95391 586 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms