RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 TSPYL4Q9UJ04 414 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 CLTCQ00610 1675 aaKnown RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 CCDC171Q6TFL3 1326 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 SPDYE5A6NIY4 337 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 GNPATO15228 680 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 POLR3GO15318 223 aaPredicted RBP6.57□□□□□ -1.36
RFX4-201ENST00000229387 OATP04181 439 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 OAS2P29728 719 aaKnown RBP6.57□□□□□ -1.36
RFX4-201ENST00000229387 CCDC178Q5BJE1 867 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 ESCO1Q5FWF5 840 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 KCNV1Q6PIU1 500 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 MICALL1Q8N3F8 863 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 RTF1Q92541 710 aaKnown RBP6.57□□□□□ -1.36
RFX4-201ENST00000229387 DDX17Q92841 729 aaKnown RBP6.57□□□□□ -1.36
RFX4-201ENST00000229387 EYA1Q99502 592 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 BEGAINQ9BUH8 593 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 CFAP74Q9C0B2 1584 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 ZSCAN9O15535 394 aaPredicted RBP6.57□□□□□ -1.36
RFX4-201ENST00000229387 RAB11FIP3O75154 756 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 PAX3P23760 479 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 NF2P35240 595 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 RAB27AP51159 221 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 SCRN1Q12765 414 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 MFSD10Q14728 455 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 HHATQ5VTY9 493 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 ZNF280DQ6N043 979 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 TMCO3Q6UWJ1 677 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 FILIP1Q7Z7B0 1213 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 CHD1LQ86WJ1 897 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 NBPF15Q8N660 670 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 UBA5Q9GZZ9 404 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 AKAP2Q9Y2D5 859 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 ZC3H13Q5T200 1668 aaKnown RBP6.57□□□□□ -1.36
RFX4-201ENST00000229387 PREX1Q8TCU6 1659 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 ZFYVE9O95405 1425 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 PES1O00541 588 aaKnown RBP6.57□□□□□ -1.36
RFX4-201ENST00000229387 TPD52L2O43399 206 aaKnown RBP6.57□□□□□ -1.36
RFX4-201ENST00000229387 DTNBO60941 627 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 ERLIN2O94905 339 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 GAS2L2Q8NHY3 880 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 N4BP2L2Q92802 583 aaPredicted RBP6.57□□□□□ -1.36
RFX4-201ENST00000229387 LRRC59Q96AG4 307 aaKnown RBP6.57□□□□□ -1.36
RFX4-201ENST00000229387 L2HGDHQ9H9P8 463 aa6.57□□□□□ -1.36
RFX4-201ENST00000229387 PNPLA6Q8IY17 1366 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 DIP2BQ9P265 1576 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 A0A1B0GUA9 196 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 TMEM88BA6NKF7 163 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 TBC1D12O60347 775 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 AP1G2O75843 785 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 NYAP1Q6ZVC0 841 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 ANKRD13AQ8IZ07 590 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 VRTNQ9H8Y1 702 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 PDRG1Q9NUG6 133 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 LMCD1Q9NZU5 365 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 COL3A1P02461 1466 aaPredicted RBP6.56□□□□□ -1.36
RFX4-201ENST00000229387 LRRC7Q96NW7 1537 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 NAT1P18440 290 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 SMC1AQ14683 1233 aaKnown RBP6.56□□□□□ -1.36
RFX4-201ENST00000229387 CPLX2Q6PUV4 134 aaKnown RBP6.56□□□□□ -1.36
RFX4-201ENST00000229387 PRPF38AQ8NAV1 312 aaKnown RBP6.56□□□□□ -1.36
RFX4-201ENST00000229387 LSM14AQ8ND56 463 aaKnown RBP6.56□□□□□ -1.36
RFX4-201ENST00000229387 BICD2Q8TD16 824 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 KAT2BQ92831 832 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 FAM163AQ96GL9 167 aaPredicted RBP6.56□□□□□ -1.36
RFX4-201ENST00000229387 C16orf45Q96MC5 204 aaPredicted RBP6.56□□□□□ -1.36
RFX4-201ENST00000229387 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.56□□□□□ -1.36
RFX4-201ENST00000229387 IRX2Q9BZI1 471 aaPredicted RBP6.56□□□□□ -1.36
RFX4-201ENST00000229387 TSPYL2Q9H2G4 693 aaPredicted RBP6.56□□□□□ -1.36
RFX4-201ENST00000229387 IFT57Q9NWB7 429 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 RIPOR2Q9Y4F9 1068 aa6.56□□□□□ -1.36
RFX4-201ENST00000229387 CHUKO15111 745 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 RTN3O95197 1032 aaPredicted RBP6.55□□□□□ -1.36
RFX4-201ENST00000229387 TUBB4AP04350 444 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 RFC5P40937 340 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 LMAN1P49257 510 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 NAP1L1P55209 391 aaKnown RBP6.55□□□□□ -1.36
RFX4-201ENST00000229387 ISM2Q6H9L7 571 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 SDCCAG8Q86SQ7 713 aaPredicted RBP6.55□□□□□ -1.36
RFX4-201ENST00000229387 C17orf50Q8WW18 174 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 MTA3Q9BTC8 594 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 AK9Q5TCS8 1911 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 EME2A4GXA9 379 aaPredicted RBP6.55□□□□□ -1.36
RFX4-201ENST00000229387 PEX19P40855 299 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 SLC8A3P57103 927 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 FILIP1LQ4L180 1135 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 CDCA2Q69YH5 1023 aaPredicted RBP6.55□□□□□ -1.36
RFX4-201ENST00000229387 MYLK4Q86YV6 388 aaPredicted RBP6.55□□□□□ -1.36
RFX4-201ENST00000229387 MYO3AQ8NEV4 1616 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 TDRD7Q8NHU6 1098 aaKnown RBP6.55□□□□□ -1.36
RFX4-201ENST00000229387 PTPRUQ92729 1446 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 ORAI2Q96SN7 254 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 FARP1Q9Y4F1 1045 aaPredicted RBP6.55□□□□□ -1.36
RFX4-201ENST00000229387 EDC4Q6P2E9 1401 aaKnown RBP6.55□□□□□ -1.36
RFX4-201ENST00000229387 PPFIA4O75335 1185 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 PDAP1Q13442 181 aaKnown RBP6.55□□□□□ -1.36
RFX4-201ENST00000229387 RCSD1Q6JBY9 416 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 KIAA1328Q86T90 577 aa6.55□□□□□ -1.36
RFX4-201ENST00000229387 JPH2Q9BR39 696 aaPredicted RBP6.55□□□□□ -1.36
RFX4-201ENST00000229387 FAM135BQ49AJ0 1406 aa6.54□□□□□ -1.36
RFX4-201ENST00000229387 CD2BP2O95400 341 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms