RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 ATG9AQ7Z3C6 839 aa12.83□□□□□ -0.36
CDCA3-201ENST00000229265 ZNF512BQ96KM6 892 aaPredicted RBP12.83□□□□□ -0.36
CDCA3-201ENST00000229265 GREM2Q9H772 168 aa12.83□□□□□ -0.36
CDCA3-201ENST00000229265 ANO2Q9NQ90 1003 aa12.83□□□□□ -0.36
CDCA3-201ENST00000229265 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.36
CDCA3-201ENST00000229265 POLR2AP24928 1970 aaKnown RBP12.83□□□□□ -0.36
CDCA3-201ENST00000229265 ASTN2O75129 1339 aaPredicted RBP12.83□□□□□ -0.36
CDCA3-201ENST00000229265 TRAF5O00463 557 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 RIMBP2O15034 1052 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 HSP90AA1P07900 732 aaKnown RBP12.82□□□□□ -0.36
CDCA3-201ENST00000229265 TFCP2Q12800 502 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 IFIT5Q13325 482 aaKnown RBP12.82□□□□□ -0.36
CDCA3-201ENST00000229265 DOK7Q18PE1 504 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 SOGA3Q5TF21 947 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 TXNRD3Q86VQ6 643 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 LARGE2Q8N3Y3 721 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 SMC1BQ8NDV3 1235 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 TRPM4Q8TD43 1214 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 MAP4K1Q92918 833 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 HAUS7Q99871 368 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-201ENST00000229265 ALDH8A1Q9H2A2 487 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-201ENST00000229265 DBNDD1Q9H9R9 158 aa12.82□□□□□ -0.36
CDCA3-201ENST00000229265 PSME4Q14997 1843 aa12.81□□□□□ -0.36
CDCA3-201ENST00000229265 ZKSCAN1P17029 563 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-201ENST00000229265 EPHX2P34913 555 aa12.81□□□□□ -0.36
CDCA3-201ENST00000229265 APLP1P51693 650 aa12.81□□□□□ -0.36
CDCA3-201ENST00000229265 KIAA2012Q0VF49 1180 aa12.81□□□□□ -0.36
CDCA3-201ENST00000229265 RNF20Q5VTR2 975 aa12.81□□□□□ -0.36
CDCA3-201ENST00000229265 DDX46Q7L014 1031 aaKnown RBP12.81□□□□□ -0.36
CDCA3-201ENST00000229265 MPNDQ8N594 471 aa12.81□□□□□ -0.36
CDCA3-201ENST00000229265 TTLL11Q8NHH1 800 aa12.81□□□□□ -0.36
CDCA3-201ENST00000229265 MXD3Q9BW11 206 aa12.81□□□□□ -0.36
CDCA3-201ENST00000229265 LSG1Q9H089 658 aaKnown RBP12.81□□□□□ -0.36
CDCA3-201ENST00000229265 ANKRD18BA2A2Z9 1011 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 BBOX1O75936 387 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 PSMA5P28066 241 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 GMPSP49915 693 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-201ENST00000229265 NEK4P51957 841 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 CUL4AQ13619 759 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 NECTIN1Q15223 517 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 EAPPQ56P03 285 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-201ENST00000229265 CCDC158Q5M9N0 1113 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 CHADLQ6NUI6 762 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 DPP8Q6V1X1 898 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-201ENST00000229265 TBC1D16Q8TBP0 767 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 KLRG1Q96E93 195 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 ZSCAN31Q96LW9 406 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-201ENST00000229265 SIL1Q9H173 461 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 HELLSQ9NRZ9 838 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 HMG20BQ9P0W2 317 aa12.8□□□□□ -0.36
CDCA3-201ENST00000229265 ZFYP08048 801 aaPredicted RBP12.79□□□□□ -0.36
CDCA3-201ENST00000229265 CTSWP56202 376 aa12.79□□□□□ -0.36
CDCA3-201ENST00000229265 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
CDCA3-201ENST00000229265 KRT32Q14532 448 aa12.79□□□□□ -0.36
CDCA3-201ENST00000229265 NBR1Q14596 966 aa12.79□□□□□ -0.36
CDCA3-201ENST00000229265 SKOR2Q2VWA4 1001 aaPredicted RBP12.79□□□□□ -0.36
CDCA3-201ENST00000229265 TSHZ3Q63HK5 1081 aa12.79□□□□□ -0.36
CDCA3-201ENST00000229265 DPY19L2Q6NUT2 758 aa12.79□□□□□ -0.36
CDCA3-201ENST00000229265 GPC2Q8N158 579 aa12.79□□□□□ -0.36
CDCA3-201ENST00000229265 GBP4Q96PP9 640 aa12.79□□□□□ -0.36
CDCA3-201ENST00000229265 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
CDCA3-201ENST00000229265 SLKQ9H2G2 1235 aaPredicted RBP12.79□□□□□ -0.36
CDCA3-201ENST00000229265 DBNLQ9UJU6 430 aaKnown RBP12.79□□□□□ -0.36
CDCA3-201ENST00000229265 SCAF8Q9UPN6 1271 aaKnown RBP12.79□□□□□ -0.36
CDCA3-201ENST00000229265 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
CDCA3-201ENST00000229265 IRS2Q9Y4H2 1338 aa12.79□□□□□ -0.36
CDCA3-201ENST00000229265 PSMD14O00487 310 aa12.78□□□□□ -0.36
CDCA3-201ENST00000229265 RAB3GAP1Q15042 981 aa12.78□□□□□ -0.36
CDCA3-201ENST00000229265 CC2D2BQ6DHV5 1058 aa12.78□□□□□ -0.36
CDCA3-201ENST00000229265 CWC27Q6UX04 472 aaKnown RBP12.78□□□□□ -0.36
CDCA3-201ENST00000229265 JMYQ8N9B5 988 aa12.78□□□□□ -0.36
CDCA3-201ENST00000229265 KBTBD3Q8NAB2 608 aa12.78□□□□□ -0.36
CDCA3-201ENST00000229265 CHMP4CQ96CF2 233 aa12.78□□□□□ -0.36
CDCA3-201ENST00000229265 BOLA2Q9H3K6 86 aa12.78□□□□□ -0.36
CDCA3-201ENST00000229265 MKRN1Q9UHC7 482 aaKnown RBP12.78□□□□□ -0.36
CDCA3-201ENST00000229265 HACL1Q9UJ83 578 aa12.78□□□□□ -0.36
CDCA3-201ENST00000229265 NSFL1CQ9UNZ2 370 aaKnown RBP12.78□□□□□ -0.36
CDCA3-201ENST00000229265 DDX11L8A8MPP1 907 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 ZBTB22O15209 634 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 IGSF3O75054 1194 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 MCM4P33991 863 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 ANKRD1Q15327 319 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 MCMDC2Q4G0Z9 681 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 TAF7LQ5H9L4 462 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 CST9Q5W186 159 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 NIM1KQ8IY84 436 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 FSD1Q9BTV5 496 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 GPRC5DQ9NZD1 345 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 ZNRF3Q9ULT6 936 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 MROH5Q6ZUA9 1318 aa12.77□□□□□ -0.37
CDCA3-201ENST00000229265 TRPM7Q96QT4 1865 aa12.76□□□□□ -0.37
CDCA3-201ENST00000229265 VPS53Q5VIR6 699 aa12.76□□□□□ -0.37
CDCA3-201ENST00000229265 LDHAL6AQ6ZMR3 332 aa12.76□□□□□ -0.37
CDCA3-201ENST00000229265 SAMD7Q7Z3H4 446 aa12.76□□□□□ -0.37
CDCA3-201ENST00000229265 LDHDQ86WU2 507 aa12.76□□□□□ -0.37
CDCA3-201ENST00000229265 ZNF594Q96JF6 807 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-201ENST00000229265 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
CDCA3-201ENST00000229265 MINPP1Q9UNW1 487 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms