RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 EIF1AYO14602 144 aaKnown RBP9.88□□□□□ -0.83
CCL1-201ENST00000225842 GTF2E1P29083 439 aaPredicted RBP9.88□□□□□ -0.83
CCL1-201ENST00000225842 PLA2G4AP47712 749 aa9.88□□□□□ -0.83
CCL1-201ENST00000225842 TTC16Q8NEE8 873 aa9.88□□□□□ -0.83
CCL1-201ENST00000225842 RHBDD1Q8TEB9 315 aa9.88□□□□□ -0.83
CCL1-201ENST00000225842 FOXC1Q12948 553 aa9.87□□□□□ -0.83
CCL1-201ENST00000225842 FAM50AQ14320 339 aaKnown RBP9.87□□□□□ -0.83
CCL1-201ENST00000225842 C1orf53Q5VUE5 145 aa9.87□□□□□ -0.83
CCL1-201ENST00000225842 TINF2Q9BSI4 451 aa9.87□□□□□ -0.83
CCL1-201ENST00000225842 TGIF2Q9GZN2 237 aa9.87□□□□□ -0.83
CCL1-201ENST00000225842 ACBD3Q9H3P7 528 aa9.87□□□□□ -0.83
CCL1-201ENST00000225842 CAPN10Q9HC96 672 aa9.87□□□□□ -0.83
CCL1-201ENST00000225842 WDR4P57081 412 aaKnown RBP9.86□□□□□ -0.83
CCL1-201ENST00000225842 GPR162Q16538 588 aa9.86□□□□□ -0.83
CCL1-201ENST00000225842 RHPN1Q8TCX5 695 aa9.86□□□□□ -0.83
CCL1-201ENST00000225842 FBF1Q8TES7 1133 aa9.86□□□□□ -0.83
CCL1-201ENST00000225842 TANGO6Q9C0B7 1094 aa9.86□□□□□ -0.83
CCL1-201ENST00000225842 TNS3Q68CZ2 1445 aa9.85□□□□□ -0.83
CCL1-201ENST00000225842 OPLAHO14841 1288 aa9.85□□□□□ -0.83
CCL1-201ENST00000225842 MICAL2O94851 1124 aa9.85□□□□□ -0.83
CCL1-201ENST00000225842 CTSHP09668 335 aa9.85□□□□□ -0.83
CCL1-201ENST00000225842 SLC27A3Q5K4L6 730 aa9.85□□□□□ -0.83
CCL1-201ENST00000225842 AIDAQ96BJ3 306 aa9.85□□□□□ -0.83
CCL1-201ENST00000225842 KLRG1Q96E93 195 aa9.85□□□□□ -0.83
CCL1-201ENST00000225842 KLF16Q9BXK1 252 aaPredicted RBP9.85□□□□□ -0.83
CCL1-201ENST00000225842 PDGFDQ9GZP0 370 aaPredicted RBP9.85□□□□□ -0.83
CCL1-201ENST00000225842 AK5Q9Y6K8 562 aa9.85□□□□□ -0.83
CCL1-201ENST00000225842 CROCC2H7BZ55 1655 aa9.85□□□□□ -0.83
CCL1-201ENST00000225842 TNS1Q9HBL0 1735 aaKnown RBP9.85□□□□□ -0.83
CCL1-201ENST00000225842 HSPA6P17066 643 aa9.84□□□□□ -0.83
CCL1-201ENST00000225842 TNNI2P48788 182 aa9.84□□□□□ -0.83
CCL1-201ENST00000225842 GNASQ5JWF2 1037 aa9.84□□□□□ -0.83
CCL1-201ENST00000225842 SPRYD7Q5W111 196 aa9.84□□□□□ -0.83
CCL1-201ENST00000225842 CRELD1Q96HD1 420 aa9.84□□□□□ -0.83
CCL1-201ENST00000225842 ARHGEF10O15013 1369 aa9.84□□□□□ -0.83
CCL1-201ENST00000225842 NAIPQ13075 1403 aa9.83□□□□□ -0.84
CCL1-201ENST00000225842 NWD2Q9ULI1 1742 aa9.83□□□□□ -0.84
CCL1-201ENST00000225842 NEFLP07196 543 aa9.83□□□□□ -0.84
CCL1-201ENST00000225842 EIF4BP23588 611 aaKnown RBP9.83□□□□□ -0.84
CCL1-201ENST00000225842 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.83□□□□□ -0.84
CCL1-201ENST00000225842 C4orf17Q53FE4 359 aa9.83□□□□□ -0.84
CCL1-201ENST00000225842 ZNF697Q5TEC3 545 aa9.83□□□□□ -0.84
CCL1-201ENST00000225842 RNF166Q96A37 237 aaPredicted RBP9.83□□□□□ -0.84
CCL1-201ENST00000225842 PUS7Q96PZ0 661 aaKnown RBP9.83□□□□□ -0.84
CCL1-201ENST00000225842 FAM13BQ9NYF5 915 aa9.83□□□□□ -0.84
CCL1-201ENST00000225842 SPG7Q9UQ90 795 aa9.83□□□□□ -0.84
CCL1-201ENST00000225842 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.83□□□□□ -0.84
CCL1-201ENST00000225842 USP20Q9Y2K6 914 aa9.83□□□□□ -0.84
CCL1-201ENST00000225842 NRKQ7Z2Y5 1582 aa9.83□□□□□ -0.84
CCL1-201ENST00000225842 SMARCA5O60264 1052 aaPredicted RBP9.82□□□□□ -0.84
CCL1-201ENST00000225842 CPNE3O75131 537 aaKnown RBP9.82□□□□□ -0.84
CCL1-201ENST00000225842 PHKA2P46019 1235 aa9.82□□□□□ -0.84
CCL1-201ENST00000225842 USPL1Q5W0Q7 1092 aa9.82□□□□□ -0.84
CCL1-201ENST00000225842 PI16Q6UXB8 463 aa9.82□□□□□ -0.84
CCL1-201ENST00000225842 ZNF280CQ8ND82 737 aa9.82□□□□□ -0.84
CCL1-201ENST00000225842 GRIP2Q9C0E4 1043 aa9.82□□□□□ -0.84
CCL1-201ENST00000225842 DNAJC25Q9H1X3 360 aa9.82□□□□□ -0.84
CCL1-201ENST00000225842 PRKAG2Q9UGJ0 569 aa9.82□□□□□ -0.84
CCL1-201ENST00000225842 FOXD3Q9UJU5 478 aaPredicted RBP9.82□□□□□ -0.84
CCL1-201ENST00000225842 PLCH1Q4KWH8 1693 aa9.82□□□□□ -0.84
CCL1-201ENST00000225842 SPATA31A1Q5TZJ5 1347 aa9.82□□□□□ -0.84
CCL1-201ENST00000225842 CDC42BPGQ6DT37 1551 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 SBNO1A3KN83 1393 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 TGFBR3LH3BV60 316 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 J3QL48 77 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 RPLP1P05386 114 aaKnown RBP9.81□□□□□ -0.84
CCL1-201ENST00000225842 HSP90B1P14625 803 aaKnown RBP9.81□□□□□ -0.84
CCL1-201ENST00000225842 TIMP2P16035 220 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 ZNF394Q53GI3 561 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 WAPLQ7Z5K2 1190 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 SNIP1Q8TAD8 396 aaKnown RBP9.81□□□□□ -0.84
CCL1-201ENST00000225842 HSH2DQ96JZ2 352 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 SUSD3Q96L08 255 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 FRMD6Q96NE9 622 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 DNAJC2Q99543 621 aaKnown RBP9.81□□□□□ -0.84
CCL1-201ENST00000225842 PKD2L1Q9P0L9 805 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 PCDHGB7Q9Y5F8 929 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 PRAG1Q86YV5 1406 aa9.81□□□□□ -0.84
CCL1-201ENST00000225842 NUP155O75694 1391 aa9.8□□□□□ -0.84
CCL1-201ENST00000225842 IRS1P35568 1242 aa9.8□□□□□ -0.84
CCL1-201ENST00000225842 NBPF1Q3BBV0 1214 aa9.8□□□□□ -0.84
CCL1-201ENST00000225842 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
CCL1-201ENST00000225842 C7orf43Q8WVR3 580 aa9.8□□□□□ -0.84
CCL1-201ENST00000225842 DHX38Q92620 1227 aaKnown RBP9.8□□□□□ -0.84
CCL1-201ENST00000225842 INSM2Q96T92 566 aaPredicted RBP9.8□□□□□ -0.84
CCL1-201ENST00000225842 PRDM11Q9NQV5 511 aa9.8□□□□□ -0.84
CCL1-201ENST00000225842 STRN4Q9NRL3 753 aa9.8□□□□□ -0.84
CCL1-201ENST00000225842 STK26Q9P289 416 aa9.8□□□□□ -0.84
CCL1-201ENST00000225842 IQGAP3Q86VI3 1631 aa9.8□□□□□ -0.84
CCL1-201ENST00000225842 NUP188Q5SRE5 1749 aa9.79□□□□□ -0.84
CCL1-201ENST00000225842 TNFRSF21O75509 655 aa9.79□□□□□ -0.84
CCL1-201ENST00000225842 HMGB1P09429 215 aaKnown RBP9.79□□□□□ -0.84
CCL1-201ENST00000225842 IDH3AP50213 366 aa9.79□□□□□ -0.84
CCL1-201ENST00000225842 SLC43A3Q8NBI5 491 aa9.79□□□□□ -0.84
CCL1-201ENST00000225842 EPS8L3Q8TE67 593 aaKnown RBP9.79□□□□□ -0.84
CCL1-201ENST00000225842 MTFR1LQ9H019 292 aa9.79□□□□□ -0.84
CCL1-201ENST00000225842 RREB1Q92766 1687 aa9.79□□□□□ -0.84
CCL1-201ENST00000225842 RRBP1Q9P2E9 1410 aaKnown RBP9.79□□□□□ -0.84
CCL1-201ENST00000225842 ROCK1Q13464 1354 aa9.78□□□□□ -0.84
CCL1-201ENST00000225842 E9PCH4 1651 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms