RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 WASHC4Q2M389 1173 aa15.43■□□□□ 0.06
PLOD3-201ENST00000223127 ZSWIM6Q9HCJ5 1215 aa15.43■□□□□ 0.06
PLOD3-201ENST00000223127 SPDYE4A6NLX3 237 aa15.43■□□□□ 0.06
PLOD3-201ENST00000223127 MCAMP43121 646 aa15.43■□□□□ 0.06
PLOD3-201ENST00000223127 C3orf67Q6ZVT6 689 aa15.43■□□□□ 0.06
PLOD3-201ENST00000223127 CNTNAP4Q9C0A0 1308 aa15.42■□□□□ 0.06
PLOD3-201ENST00000223127 RNF113AO15541 343 aaKnown RBP15.42■□□□□ 0.06
PLOD3-201ENST00000223127 PHKA1P46020 1223 aa15.42■□□□□ 0.06
PLOD3-201ENST00000223127 LIMCH1Q9UPQ0 1083 aa15.42■□□□□ 0.06
PLOD3-201ENST00000223127 LARGE1O95461 756 aa15.42■□□□□ 0.06
PLOD3-201ENST00000223127 CLEC4GQ6UXB4 293 aa15.42■□□□□ 0.06
PLOD3-201ENST00000223127 KCNB2Q92953 911 aa15.42■□□□□ 0.06
PLOD3-201ENST00000223127 AK7Q96M32 723 aa15.42■□□□□ 0.06
PLOD3-201ENST00000223127 MYH3P11055 1940 aa15.41■□□□□ 0.06
PLOD3-201ENST00000223127 CTIFO43310 598 aaKnown RBP15.41■□□□□ 0.06
PLOD3-201ENST00000223127 ZPR1O75312 459 aa15.41■□□□□ 0.06
PLOD3-201ENST00000223127 RPS6KA4O75676 772 aa15.41■□□□□ 0.06
PLOD3-201ENST00000223127 U2AF2P26368 475 aaKnown RBP eCLIP15.41■□□□□ 0.06
PLOD3-201ENST00000223127 IGHMBP2P38935 993 aaKnown RBP15.41■□□□□ 0.06
PLOD3-201ENST00000223127 ZMYM1Q5SVZ6 1142 aa15.41■□□□□ 0.06
PLOD3-201ENST00000223127 SPC24Q8NBT2 197 aa15.41■□□□□ 0.06
PLOD3-201ENST00000223127 RTCBQ9Y3I0 505 aaKnown RBP15.41■□□□□ 0.06
PLOD3-201ENST00000223127 MAST3O60307 1309 aa15.41■□□□□ 0.06
PLOD3-201ENST00000223127 PUM3Q15397 648 aaKnown RBP15.41■□□□□ 0.06
PLOD3-201ENST00000223127 CCDC102BQ68D86 513 aa15.41■□□□□ 0.06
PLOD3-201ENST00000223127 OSBP2Q969R2 916 aa15.41■□□□□ 0.06
PLOD3-201ENST00000223127 RFX7Q2KHR2 1363 aa15.41■□□□□ 0.06
PLOD3-201ENST00000223127 M0R2C6 588 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 BLOC1S2Q6QNY1 142 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.4■□□□□ 0.06
PLOD3-201ENST00000223127 MROH5Q6ZUA9 1318 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 PSMA5P28066 241 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 CHAF1AQ13111 956 aaPredicted RBP15.4■□□□□ 0.06
PLOD3-201ENST00000223127 TM6SF1Q9BZW5 370 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 HELLSQ9NRZ9 838 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 COL5A3P25940 1745 aaPredicted RBP15.4■□□□□ 0.06
PLOD3-201ENST00000223127 BTAF1O14981 1849 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 A0A0G2JLW4 131 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 KIF20AO95235 890 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 CYP21A2P08686 494 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 LPIN2Q92539 896 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 ARHGEF1Q92888 912 aaKnown RBP15.4■□□□□ 0.06
PLOD3-201ENST00000223127 NARFQ9UHQ1 456 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 U3KPZ7 1027 aaPredicted RBP15.4■□□□□ 0.06
PLOD3-201ENST00000223127 THSD7AQ9UPZ6 1657 aa15.4■□□□□ 0.06
PLOD3-201ENST00000223127 RREB1Q92766 1687 aa15.39■□□□□ 0.05
PLOD3-201ENST00000223127 IDH1O75874 414 aaKnown RBP15.39■□□□□ 0.05
PLOD3-201ENST00000223127 CCDC83Q8IWF9 413 aa15.39■□□□□ 0.05
PLOD3-201ENST00000223127 SETDB2Q96T68 719 aa15.39■□□□□ 0.05
PLOD3-201ENST00000223127 NPHP1O15259 732 aa15.39■□□□□ 0.05
PLOD3-201ENST00000223127 TPM3P06753 285 aa15.39■□□□□ 0.05
PLOD3-201ENST00000223127 DNM1Q05193 864 aaKnown RBP15.39■□□□□ 0.05
PLOD3-201ENST00000223127 NECAB1Q8N987 351 aa15.39■□□□□ 0.05
PLOD3-201ENST00000223127 SMC3Q9UQE7 1217 aa15.39■□□□□ 0.05
PLOD3-201ENST00000223127 HSPD1P10809 573 aaKnown RBP15.38■□□□□ 0.05
PLOD3-201ENST00000223127 HSP90B1P14625 803 aaKnown RBP15.38■□□□□ 0.05
PLOD3-201ENST00000223127 RC3H1Q5TC82 1133 aaKnown RBP15.38■□□□□ 0.05
PLOD3-201ENST00000223127 FAM196AQ6ZSG2 479 aa15.38■□□□□ 0.05
PLOD3-201ENST00000223127 NBPF5PQ86XG9 351 aaPredicted RBP15.38■□□□□ 0.05
PLOD3-201ENST00000223127 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
PLOD3-201ENST00000223127 HMG20BQ9P0W2 317 aa15.38■□□□□ 0.05
PLOD3-201ENST00000223127 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.38■□□□□ 0.05
PLOD3-201ENST00000223127 WTIPA6NIX2 430 aaPredicted RBP15.38■□□□□ 0.05
PLOD3-201ENST00000223127 SLC5A1P13866 664 aa15.38■□□□□ 0.05
PLOD3-201ENST00000223127 MTMR6Q9Y217 621 aa15.38■□□□□ 0.05
PLOD3-201ENST00000223127 ONECUT3O60422 494 aaPredicted RBP15.37■□□□□ 0.05
PLOD3-201ENST00000223127 FGFR2P21802 821 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 PTGS1P23219 599 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 CHRNDQ07001 517 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 ME3Q16798 604 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 TTLL5Q6EMB2 1281 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 PUS7LQ9H0K6 701 aaKnown RBP15.37■□□□□ 0.05
PLOD3-201ENST00000223127 LRRC4BQ9NT99 713 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 TPCN1Q9ULQ1 816 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 ATP6V1DQ9Y5K8 247 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 RPS6KB1P23443 525 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 RFC4P35249 363 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 NCBP1Q09161 790 aaKnown RBP15.37■□□□□ 0.05
PLOD3-201ENST00000223127 SLC9C2Q5TAH2 1124 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 LRRC2Q9BYS8 371 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 PIH1D3Q9NQM4 214 aaKnown RBP15.37■□□□□ 0.05
PLOD3-201ENST00000223127 IQSEC3Q9UPP2 1182 aaPredicted RBP15.37■□□□□ 0.05
PLOD3-201ENST00000223127 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 ATRNO75882 1429 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 A0A0U1RQG5 324 aaPredicted RBP15.37■□□□□ 0.05
PLOD3-201ENST00000223127 GOLGA6L6A8MZA4 724 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 BCAMP50895 628 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 NEK1Q96PY6 1258 aa15.37■□□□□ 0.05
PLOD3-201ENST00000223127 CDC5LQ99459 802 aaKnown RBP15.37■□□□□ 0.05
PLOD3-201ENST00000223127 STK3Q13188 491 aa15.36■□□□□ 0.05
PLOD3-201ENST00000223127 LRRFIP1Q32MZ4 808 aaKnown RBP15.36■□□□□ 0.05
PLOD3-201ENST00000223127 TRIM37O94972 964 aa15.36■□□□□ 0.05
PLOD3-201ENST00000223127 GJB2P29033 226 aa15.36■□□□□ 0.05
PLOD3-201ENST00000223127 STOX1Q6ZVD7 989 aa15.36■□□□□ 0.05
PLOD3-201ENST00000223127 ANKRD18AQ8IVF6 992 aa15.36■□□□□ 0.05
PLOD3-201ENST00000223127 CICQ96RK0 1608 aaPredicted RBP15.36■□□□□ 0.05
PLOD3-201ENST00000223127 CCDC192P0DO97 292 aa15.35■□□□□ 0.05
PLOD3-201ENST00000223127 HAND2P61296 217 aa15.35■□□□□ 0.05
PLOD3-201ENST00000223127 ST3GAL1Q11201 340 aa15.35■□□□□ 0.05
PLOD3-201ENST00000223127 RASGRF1Q13972 1273 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms