RNA–Protein interactions for RNA: ENST00000216366.8

AP4S1-201, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 1 (best) BASIC

Gene AP4S1, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-201ENST00000216366 NCAPHQ15003 741 aa13.23□□□□□ -0.29
AP4S1-201ENST00000216366 LMBR1LQ6UX01 489 aa13.23□□□□□ -0.29
AP4S1-201ENST00000216366 ZNF771Q7L3S4 317 aaPredicted RBP13.23□□□□□ -0.29
AP4S1-201ENST00000216366 CHST3Q7LGC8 479 aa13.23□□□□□ -0.29
AP4S1-201ENST00000216366 CCDC150Q8NCX0 1101 aa13.23□□□□□ -0.29
AP4S1-201ENST00000216366 POLR3EQ9NVU0 708 aa13.23□□□□□ -0.29
AP4S1-201ENST00000216366 ATP5J2-PTCD1G3V325 749 aa13.22□□□□□ -0.29
AP4S1-201ENST00000216366 PTCD1O75127 700 aaKnown RBP13.22□□□□□ -0.29
AP4S1-201ENST00000216366 H2AFXP16104 143 aaPredicted RBP13.22□□□□□ -0.29
AP4S1-201ENST00000216366 PIP4K2AP48426 406 aaPredicted RBP13.22□□□□□ -0.29
AP4S1-201ENST00000216366 KCNG4Q8TDN1 519 aa13.22□□□□□ -0.29
AP4S1-201ENST00000216366 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
AP4S1-201ENST00000216366 ZNF446Q9NWS9 450 aa13.22□□□□□ -0.29
AP4S1-201ENST00000216366 IFNKQ9P0W0 207 aa13.22□□□□□ -0.29
AP4S1-201ENST00000216366 NLRP12P59046 1061 aa13.22□□□□□ -0.29
AP4S1-201ENST00000216366 TIMM10P62072 90 aa13.22□□□□□ -0.29
AP4S1-201ENST00000216366 H7C1W4 665 aa13.21□□□□□ -0.29
AP4S1-201ENST00000216366 RNF113AO15541 343 aaKnown RBP13.21□□□□□ -0.29
AP4S1-201ENST00000216366 TUBB4AP04350 444 aa13.21□□□□□ -0.29
AP4S1-201ENST00000216366 TTLL5Q6EMB2 1281 aa13.21□□□□□ -0.29
AP4S1-201ENST00000216366 OTUD7BQ6GQQ9 843 aa13.21□□□□□ -0.29
AP4S1-201ENST00000216366 TMC6Q7Z403 805 aa13.21□□□□□ -0.29
AP4S1-201ENST00000216366 FBXO18Q8NFZ0 1043 aa13.21□□□□□ -0.29
AP4S1-201ENST00000216366 NEUROD6Q96NK8 337 aa13.21□□□□□ -0.29
AP4S1-201ENST00000216366 ORAI2Q96SN7 254 aa13.21□□□□□ -0.29
AP4S1-201ENST00000216366 RGPD5Q99666 1765 aa13.21□□□□□ -0.3
AP4S1-201ENST00000216366 M0R2C6 588 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 SPTLC2O15270 562 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 DHX8Q14562 1220 aaKnown RBP13.2□□□□□ -0.3
AP4S1-201ENST00000216366 STK38Q15208 465 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 AXDND1Q5T1B0 1012 aaPredicted RBP13.2□□□□□ -0.3
AP4S1-201ENST00000216366 MYSM1Q5VVJ2 828 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 TAF3Q5VWG9 929 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 PLBD2Q8NHP8 589 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 GPHNQ9NQX3 736 aaPredicted RBP13.2□□□□□ -0.3
AP4S1-201ENST00000216366 NAP1L2Q9ULW6 460 aaPredicted RBP13.2□□□□□ -0.3
AP4S1-201ENST00000216366 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
AP4S1-201ENST00000216366 TRPM3Q9HCF6 1732 aaPredicted RBP13.2□□□□□ -0.3
AP4S1-201ENST00000216366 SPEF2Q9C093 1822 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 FOXP2O15409 715 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 ZNF202O95125 648 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 SMC2O95347 1197 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 SLC3A2P08195 630 aaKnown RBP13.2□□□□□ -0.3
AP4S1-201ENST00000216366 SFPQP23246 707 aaKnown RBP eCLIP13.2□□□□□ -0.3
AP4S1-201ENST00000216366 SYT10Q6XYQ8 523 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 BRAPQ7Z569 592 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 HSD3B7Q9H2F3 369 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 NWD2Q9ULI1 1742 aa13.2□□□□□ -0.3
AP4S1-201ENST00000216366 GLI3P10071 1580 aa13.19□□□□□ -0.3
AP4S1-201ENST00000216366 IKBKBO14920 756 aa13.19□□□□□ -0.3
AP4S1-201ENST00000216366 POLR3DP05423 398 aaPredicted RBP13.19□□□□□ -0.3
AP4S1-201ENST00000216366 IL15P40933 162 aaPredicted RBP13.19□□□□□ -0.3
AP4S1-201ENST00000216366 ERCC6LQ2NKX8 1250 aa13.19□□□□□ -0.3
AP4S1-201ENST00000216366 LRRN4CLQ8ND94 238 aa13.19□□□□□ -0.3
AP4S1-201ENST00000216366 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
AP4S1-201ENST00000216366 OSBP2Q969R2 916 aa13.19□□□□□ -0.3
AP4S1-201ENST00000216366 C8orf76Q96K31 380 aa13.19□□□□□ -0.3
AP4S1-201ENST00000216366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.19□□□□□ -0.3
AP4S1-201ENST00000216366 HPS5Q9UPZ3 1129 aa13.19□□□□□ -0.3
AP4S1-201ENST00000216366 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
AP4S1-201ENST00000216366 CMA1P23946 247 aa13.19□□□□□ -0.3
AP4S1-201ENST00000216366 FAM193AP78312 1265 aa13.19□□□□□ -0.3
AP4S1-201ENST00000216366 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
AP4S1-201ENST00000216366 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.19□□□□□ -0.3
AP4S1-201ENST00000216366 KIF28PB7ZC32 967 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 TUBE1Q9UJT0 475 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.18□□□□□ -0.3
AP4S1-201ENST00000216366 DDX60Q8IY21 1712 aaKnown RBP13.18□□□□□ -0.3
AP4S1-201ENST00000216366 MEGF6O75095 1541 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 BIN1O00499 593 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 PFKFB1P16118 471 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 FANCCQ00597 558 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 KIF23Q02241 960 aaPredicted RBP13.18□□□□□ -0.3
AP4S1-201ENST00000216366 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
AP4S1-201ENST00000216366 ANO1Q5XXA6 986 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 MB21D2Q8IYB1 491 aaPredicted RBP13.18□□□□□ -0.3
AP4S1-201ENST00000216366 IFNL2Q8IZJ0 200 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 TTC5Q8N0Z6 440 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 RGS22Q8NE09 1264 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 TIGD1Q96MW7 591 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 TMX1Q9H3N1 280 aa13.18□□□□□ -0.3
AP4S1-201ENST00000216366 MST1RQ04912 1400 aa13.17□□□□□ -0.3
AP4S1-201ENST00000216366 EYA2O00167 538 aa13.17□□□□□ -0.3
AP4S1-201ENST00000216366 TATP17735 454 aaPredicted RBP13.17□□□□□ -0.3
AP4S1-201ENST00000216366 ETF1P62495 437 aaKnown RBP13.17□□□□□ -0.3
AP4S1-201ENST00000216366 TPM4P67936 248 aa13.17□□□□□ -0.3
AP4S1-201ENST00000216366 BMS1Q14692 1282 aaKnown RBP13.17□□□□□ -0.3
AP4S1-201ENST00000216366 LRRC24Q50LG9 513 aa13.17□□□□□ -0.3
AP4S1-201ENST00000216366 SYTL4Q96C24 671 aaPredicted RBP13.17□□□□□ -0.3
AP4S1-201ENST00000216366 GJB4Q9NTQ9 266 aa13.17□□□□□ -0.3
AP4S1-201ENST00000216366 ORC3Q9UBD5 711 aaPredicted RBP13.17□□□□□ -0.3
AP4S1-201ENST00000216366 FHOD1Q9Y613 1164 aa13.17□□□□□ -0.3
AP4S1-201ENST00000216366 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 A0A1B0GUL7 405 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
AP4S1-201ENST00000216366 WDHD1O75717 1129 aaPredicted RBP13.16□□□□□ -0.3
AP4S1-201ENST00000216366 ANTXR2P58335 489 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 LMOD2Q6P5Q4 547 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 TRIM65Q6PJ69 517 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms