RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 SPATA5Q8NB90 893 aa12.08□□□□□ -0.48
RTCB-201ENST00000216038 DBNDD1Q9H9R9 158 aa12.08□□□□□ -0.48
RTCB-201ENST00000216038 PAG1Q9NWQ8 432 aa12.08□□□□□ -0.48
RTCB-201ENST00000216038 MED23Q9ULK4 1368 aa12.07□□□□□ -0.48
RTCB-201ENST00000216038 COL1A1P02452 1464 aaPredicted RBP12.07□□□□□ -0.48
RTCB-201ENST00000216038 ARFGEF1Q9Y6D6 1849 aa12.07□□□□□ -0.48
RTCB-201ENST00000216038 G3V3G9 751 aa12.07□□□□□ -0.48
RTCB-201ENST00000216038 CHGBP05060 677 aa12.07□□□□□ -0.48
RTCB-201ENST00000216038 UQCRFS1P1P0C7P4 283 aa12.07□□□□□ -0.48
RTCB-201ENST00000216038 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
RTCB-201ENST00000216038 GNL3LQ9NVN8 582 aaKnown RBP12.07□□□□□ -0.48
RTCB-201ENST00000216038 FER1L6Q2WGJ9 1857 aa12.07□□□□□ -0.48
RTCB-201ENST00000216038 PPIP5K2O43314 1243 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 CYP2E1P05181 493 aaPredicted RBP12.06□□□□□ -0.48
RTCB-201ENST00000216038 CNTROBQ8N137 903 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 EYA3Q99504 573 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 RTFDC1Q9BY42 306 aaPredicted RBP12.06□□□□□ -0.48
RTCB-201ENST00000216038 CD209Q9NNX6 404 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 KCNQ5Q9NR82 932 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 NFKBIEO00221 500 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 RASSF7Q02833 373 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 SLFNL1Q499Z3 407 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 SOGA3Q5TF21 947 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 C15orf52Q6ZUT6 534 aaKnown RBP12.06□□□□□ -0.48
RTCB-201ENST00000216038 FBXW7Q969H0 707 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 ZNF512BQ96KM6 892 aaPredicted RBP12.06□□□□□ -0.48
RTCB-201ENST00000216038 FSD1Q9BTV5 496 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
RTCB-201ENST00000216038 YBX3P16989 372 aaKnown RBP eCLIP12.05□□□□□ -0.48
RTCB-201ENST00000216038 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.05□□□□□ -0.48
RTCB-201ENST00000216038 EVI5LQ96CN4 794 aa12.05□□□□□ -0.48
RTCB-201ENST00000216038 PSMD1Q99460 953 aa12.05□□□□□ -0.48
RTCB-201ENST00000216038 TAOK3Q9H2K8 898 aa12.05□□□□□ -0.48
RTCB-201ENST00000216038 PIH1D3Q9NQM4 214 aaKnown RBP12.05□□□□□ -0.48
RTCB-201ENST00000216038 ABCF2Q9UG63 623 aa12.05□□□□□ -0.48
RTCB-201ENST00000216038 SCN9AQ15858 1988 aa12.05□□□□□ -0.48
RTCB-201ENST00000216038 KIAA2012Q0VF49 1180 aa12.04□□□□□ -0.48
RTCB-201ENST00000216038 NFKBIBQ15653 356 aa12.04□□□□□ -0.48
RTCB-201ENST00000216038 C8orf34Q49A92 452 aa12.04□□□□□ -0.48
RTCB-201ENST00000216038 ARHGAP27Q6ZUM4 889 aa12.04□□□□□ -0.48
RTCB-201ENST00000216038 TDRD7Q8NHU6 1098 aaKnown RBP12.04□□□□□ -0.48
RTCB-201ENST00000216038 COL4A5P29400 1685 aa12.04□□□□□ -0.48
RTCB-201ENST00000216038 ECE2O60344 883 aa12.04□□□□□ -0.48
RTCB-201ENST00000216038 IDH1O75874 414 aaKnown RBP12.04□□□□□ -0.48
RTCB-201ENST00000216038 IL1R1P14778 569 aa12.04□□□□□ -0.48
RTCB-201ENST00000216038 LARGE2Q8N3Y3 721 aa12.04□□□□□ -0.48
RTCB-201ENST00000216038 SUPT20HQ8NEM7 779 aa12.04□□□□□ -0.48
RTCB-201ENST00000216038 COA1Q9GZY4 146 aa12.04□□□□□ -0.48
RTCB-201ENST00000216038 DENND2AQ9ULE3 1009 aa12.04□□□□□ -0.48
RTCB-201ENST00000216038 GTF2IP78347 998 aa12.03□□□□□ -0.48
RTCB-201ENST00000216038 GRIPAP1Q4V328 841 aa12.03□□□□□ -0.48
RTCB-201ENST00000216038 MXD3Q9BW11 206 aa12.03□□□□□ -0.48
RTCB-201ENST00000216038 MYH7P12883 1935 aa12.03□□□□□ -0.48
RTCB-201ENST00000216038 CDC45O75419 566 aa12.03□□□□□ -0.48
RTCB-201ENST00000216038 PRELPP51888 382 aa12.03□□□□□ -0.48
RTCB-201ENST00000216038 KBTBD3Q8NAB2 608 aa12.03□□□□□ -0.48
RTCB-201ENST00000216038 LRP2BPQ9P2M1 347 aa12.03□□□□□ -0.48
RTCB-201ENST00000216038 YDJCA8MPS7 323 aa12.02□□□□□ -0.49
RTCB-201ENST00000216038 SEMA3EO15041 775 aa12.02□□□□□ -0.49
RTCB-201ENST00000216038 RRP9O43818 475 aaKnown RBP12.02□□□□□ -0.49
RTCB-201ENST00000216038 SEC24BO95487 1268 aa12.02□□□□□ -0.49
RTCB-201ENST00000216038 CHMLP26374 656 aa12.02□□□□□ -0.49
RTCB-201ENST00000216038 PRDX5P30044 214 aa12.02□□□□□ -0.49
RTCB-201ENST00000216038 IARSP41252 1262 aaKnown RBP12.02□□□□□ -0.49
RTCB-201ENST00000216038 GRIK5Q16478 980 aa12.02□□□□□ -0.49
RTCB-201ENST00000216038 TTLL5Q6EMB2 1281 aa12.02□□□□□ -0.49
RTCB-201ENST00000216038 CWC27Q6UX04 472 aaKnown RBP12.02□□□□□ -0.49
RTCB-201ENST00000216038 FAM227BQ96M60 508 aa12.02□□□□□ -0.49
RTCB-201ENST00000216038 ZMYND15Q9H091 742 aa12.02□□□□□ -0.49
RTCB-201ENST00000216038 IL25Q9H293 177 aa12.02□□□□□ -0.49
RTCB-201ENST00000216038 TTF1Q15361 905 aaPredicted RBP12.01□□□□□ -0.49
RTCB-201ENST00000216038 GPR162Q16538 588 aa12.01□□□□□ -0.49
RTCB-201ENST00000216038 SLC9C2Q5TAH2 1124 aa12.01□□□□□ -0.49
RTCB-201ENST00000216038 DIAPH3Q9NSV4 1193 aa12.01□□□□□ -0.49
RTCB-201ENST00000216038 RAI14Q9P0K7 980 aa12.01□□□□□ -0.49
RTCB-201ENST00000216038 DOCK2Q92608 1830 aa12.01□□□□□ -0.49
RTCB-201ENST00000216038 RAD17O75943 681 aa12.01□□□□□ -0.49
RTCB-201ENST00000216038 MFSD14BQ5SR56 506 aa12.01□□□□□ -0.49
RTCB-201ENST00000216038 PODNQ7Z5L7 613 aa12.01□□□□□ -0.49
RTCB-201ENST00000216038 SEC62Q99442 399 aaKnown RBP12.01□□□□□ -0.49
RTCB-201ENST00000216038 A0A0D9SFI3 127 aa12□□□□□ -0.49
RTCB-201ENST00000216038 F8W031 263 aaPredicted RBP12□□□□□ -0.49
RTCB-201ENST00000216038 NMIQ13287 307 aaPredicted RBP12□□□□□ -0.49
RTCB-201ENST00000216038 SBF1O95248 1867 aa12□□□□□ -0.49
RTCB-201ENST00000216038 NIM1KQ8IY84 436 aa11.99□□□□□ -0.49
RTCB-201ENST00000216038 CERS5Q8N5B7 392 aa11.99□□□□□ -0.49
RTCB-201ENST00000216038 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
RTCB-201ENST00000216038 WDR66Q8TBY9 1149 aa11.99□□□□□ -0.49
RTCB-201ENST00000216038 JDP2Q8WYK2 163 aa11.99□□□□□ -0.49
RTCB-201ENST00000216038 PDE6AP16499 860 aa11.99□□□□□ -0.49
RTCB-201ENST00000216038 MAP3K12Q12852 859 aa11.99□□□□□ -0.49
RTCB-201ENST00000216038 CASC1Q6TDU7 716 aa11.99□□□□□ -0.49
RTCB-201ENST00000216038 ZNF384Q8TF68 577 aa11.99□□□□□ -0.49
RTCB-201ENST00000216038 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.99□□□□□ -0.49
RTCB-201ENST00000216038 PDS5AQ29RF7 1337 aaKnown RBP11.98□□□□□ -0.49
RTCB-201ENST00000216038 ZNF532Q9HCE3 1301 aa11.98□□□□□ -0.49
RTCB-201ENST00000216038 RNF113AO15541 343 aaKnown RBP11.98□□□□□ -0.49
RTCB-201ENST00000216038 LDHBP07195 334 aaKnown RBP11.98□□□□□ -0.49
RTCB-201ENST00000216038 MFAP1P55081 439 aaKnown RBP11.98□□□□□ -0.49
RTCB-201ENST00000216038 MECOMQ03112 1051 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms