RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 SSX2IPQ9Y2D8 614 aa14.21□□□□□ -0.13
LMCD1-201ENST00000157600 SAMD9Q5K651 1589 aa14.21□□□□□ -0.13
LMCD1-201ENST00000157600 CBX1P83916 185 aa14.21□□□□□ -0.13
LMCD1-201ENST00000157600 CCDC42Q96M95 316 aa14.21□□□□□ -0.14
LMCD1-201ENST00000157600 LMAN1P49257 510 aa14.21□□□□□ -0.14
LMCD1-201ENST00000157600 RILPL1Q5EBL4 403 aa14.21□□□□□ -0.14
LMCD1-201ENST00000157600 BICD1Q96G01 975 aa14.21□□□□□ -0.14
LMCD1-201ENST00000157600 UBE4AQ14139 1066 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 CPLX3Q8WVH0 158 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 USHBP1Q8N6Y0 703 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 CLASP1Q7Z460 1538 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 SYNMO15061 1565 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 MEIS3Q99687 375 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 RNF113AO15541 343 aaKnown RBP14.2□□□□□ -0.14
LMCD1-201ENST00000157600 NEK11Q8NG66 645 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 CCDC97Q96F63 343 aaPredicted RBP14.2□□□□□ -0.14
LMCD1-201ENST00000157600 CSRNP2Q9H175 543 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 MTRF1LQ9UGC7 380 aaKnown RBP14.2□□□□□ -0.14
LMCD1-201ENST00000157600 PCDH11XQ9BZA7 1347 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 PCDH11YQ9BZA8 1340 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 SLC4A4Q9Y6R1 1079 aa14.2□□□□□ -0.14
LMCD1-201ENST00000157600 KRT79Q5XKE5 535 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 GIMAP6Q6P9H5 292 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 IMPACTQ9P2X3 320 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 CNPY2Q9Y2B0 182 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 PLCD1P51178 756 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 NAPAP54920 295 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 CYP7A1P22680 504 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 TNNC1P63316 161 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 CCDC129Q6ZRS4 1044 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 SH2D4AQ9H788 454 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 SWAP70Q9UH65 585 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 YTHDC2Q9H6S0 1430 aaKnown RBP14.19□□□□□ -0.14
LMCD1-201ENST00000157600 SSH2Q76I76 1423 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 ASIC1P78348 528 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 DTHD1Q6ZMT9 781 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 DACT1Q9NYF0 836 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 MAGEB6P1A0A0J9YX57 407 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 ZBTB40Q9NUA8 1239 aa14.19□□□□□ -0.14
LMCD1-201ENST00000157600 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
LMCD1-201ENST00000157600 ALDH3A1P30838 453 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 TMEM87BQ96K49 555 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 NGLY1Q96IV0 654 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 PCDHB15Q9Y5E8 787 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 SLC9C2Q5TAH2 1124 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 CEP85Q6P2H3 762 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 GPTP24298 496 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 XAGE3Q8WTP9 111 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 CDCA7Q9BWT1 371 aaPredicted RBP14.18□□□□□ -0.14
LMCD1-201ENST00000157600 MTUS1Q9ULD2 1270 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 GDPD2Q9HCC8 539 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
LMCD1-201ENST00000157600 HAND2P61296 217 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 LZTS2Q9BRK4 669 aa14.18□□□□□ -0.14
LMCD1-201ENST00000157600 LUC7L2Q9Y383 392 aaKnown RBP14.18□□□□□ -0.14
LMCD1-201ENST00000157600 ARID4AP29374 1257 aaPredicted RBP14.17□□□□□ -0.14
LMCD1-201ENST00000157600 FAM160A1Q05DH4 1040 aa14.17□□□□□ -0.14
LMCD1-201ENST00000157600 CREB3L3Q68CJ9 461 aa14.17□□□□□ -0.14
LMCD1-201ENST00000157600 EBAG9O00559 213 aa14.17□□□□□ -0.14
LMCD1-201ENST00000157600 RBM26Q5T8P6 1007 aaKnown RBP14.17□□□□□ -0.14
LMCD1-201ENST00000157600 HDXQ7Z353 690 aa14.17□□□□□ -0.14
LMCD1-201ENST00000157600 HEATR3Q7Z4Q2 680 aa14.17□□□□□ -0.14
LMCD1-201ENST00000157600 CFAP57Q96MR6 1250 aa14.17□□□□□ -0.14
LMCD1-201ENST00000157600 SBNO1A3KN83 1393 aa14.17□□□□□ -0.14
LMCD1-201ENST00000157600 BLMP54132 1417 aaPredicted RBP14.17□□□□□ -0.14
LMCD1-201ENST00000157600 IBTKQ9P2D0 1353 aaPredicted RBP14.16□□□□□ -0.14
LMCD1-201ENST00000157600 CCDC144CPQ8IYA2 1237 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 COMMD10Q9Y6G5 202 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 DNAI1Q9UI46 699 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 CNNM4Q6P4Q7 775 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 KIFAP3Q92845 792 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 SMC6Q96SB8 1091 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 NUP58Q9BVL2 599 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 ATP5J2-PTCD1G3V325 749 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 SNX16P57768 344 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 C8orf34Q49A92 452 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 TPTE2Q6XPS3 522 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 AOPEPQ8N6M6 819 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 FRMD4BQ9Y2L6 1034 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 GTF2F1P35269 517 aaKnown RBP eCLIP14.16□□□□□ -0.14
LMCD1-201ENST00000157600 GABPB2Q8TAK5 448 aaPredicted RBP14.16□□□□□ -0.14
LMCD1-201ENST00000157600 TERF1P54274 439 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 GPR161Q8N6U8 529 aaKnown RBP14.16□□□□□ -0.14
LMCD1-201ENST00000157600 CCDC26Q8TAB7 109 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 FBF1Q8TES7 1133 aa14.16□□□□□ -0.14
LMCD1-201ENST00000157600 MSL1Q68DK7 614 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 B4GALNT4Q76KP1 1039 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 CCDC65Q8IXS2 484 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 KCNG1Q9UIX4 513 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 MYL5Q02045 173 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 DNM1Q05193 864 aaKnown RBP14.15□□□□□ -0.14
LMCD1-201ENST00000157600 COPS6Q7L5N1 327 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 SMARCC2Q8TAQ2 1214 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 IL2RBP14784 551 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 PLEKHM2Q8IWE5 1019 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 TMEM87AQ8NBN3 555 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 FAM83GA6ND36 823 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 PHACTR2O75167 634 aa14.15□□□□□ -0.14
LMCD1-201ENST00000157600 UBXN1Q04323 297 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms