RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ORC3Q9UBD5 711 aaPredicted RBP14.06□□□□□ -0.16
CHPF2-201ENST00000035307 KLF18A0A0U1RQI7 1052 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 RXRBP28702 533 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 SCARF1Q14162 830 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 DOK7Q18PE1 504 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 LINC00116Q8NCU8 138 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 SDR42E1Q8WUS8 393 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 CTNNA3Q9UI47 895 aa14.06□□□□□ -0.16
CHPF2-201ENST00000035307 hCG_1642624A0A1W2PR95 340 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 GPAA1O43292 621 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 POLA2Q14181 598 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 OLFM4Q6UX06 510 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 CELF1Q92879 486 aaKnown RBP14.05□□□□□ -0.16
CHPF2-201ENST00000035307 AATFQ9NY61 560 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHPF2-201ENST00000035307 CTDSPL2Q05D32 466 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 PUM3Q15397 648 aaKnown RBP14.05□□□□□ -0.16
CHPF2-201ENST00000035307 PARP10Q53GL7 1025 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 PI4K2BQ8TCG2 481 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 NAT10Q9H0A0 1025 aaKnown RBP14.05□□□□□ -0.16
CHPF2-201ENST00000035307 STX8Q9UNK0 236 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 ZNF532Q9HCE3 1301 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 WTIPA6NIX2 430 aaPredicted RBP14.05□□□□□ -0.16
CHPF2-201ENST00000035307 B4E1Z4 1266 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 UBE2HP62256 183 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 KBTBD3Q8NAB2 608 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 SCAND2PQ9GZW5 306 aaPredicted RBP14.05□□□□□ -0.16
CHPF2-201ENST00000035307 PARP3Q9Y6F1 533 aa14.05□□□□□ -0.16
CHPF2-201ENST00000035307 JAK2O60674 1132 aa14.04□□□□□ -0.16
CHPF2-201ENST00000035307 ZNF165P49910 485 aa14.04□□□□□ -0.16
CHPF2-201ENST00000035307 ZC3H12CQ9C0D7 883 aaKnown RBP14.04□□□□□ -0.16
CHPF2-201ENST00000035307 SLC27A2O14975 620 aa14.04□□□□□ -0.16
CHPF2-201ENST00000035307 TPM3P06753 285 aa14.04□□□□□ -0.16
CHPF2-201ENST00000035307 MARCKSP29966 332 aaPredicted RBP14.04□□□□□ -0.16
CHPF2-201ENST00000035307 TRIM22Q8IYM9 498 aa14.04□□□□□ -0.16
CHPF2-201ENST00000035307 INCENPQ9NQS7 918 aa14.04□□□□□ -0.16
CHPF2-201ENST00000035307 EN1Q05925 392 aaPredicted RBP14.04□□□□□ -0.16
CHPF2-201ENST00000035307 PRDM10Q9NQV6 1147 aa14.04□□□□□ -0.16
CHPF2-201ENST00000035307 LMBRD1Q9NUN5 540 aa14.04□□□□□ -0.16
CHPF2-201ENST00000035307 SPATA31A5Q5VU36 1347 aa14.03□□□□□ -0.16
CHPF2-201ENST00000035307 SPATA31A7Q8IWB4 1347 aa14.03□□□□□ -0.16
CHPF2-201ENST00000035307 ANAPC15P60006 121 aa14.03□□□□□ -0.16
CHPF2-201ENST00000035307 TMEM67Q5HYA8 995 aa14.03□□□□□ -0.16
CHPF2-201ENST00000035307 CMTR1Q8N1G2 835 aaKnown RBP14.03□□□□□ -0.16
CHPF2-201ENST00000035307 PKNOX2Q96KN3 472 aa14.03□□□□□ -0.16
CHPF2-201ENST00000035307 DNAJC25Q9H1X3 360 aa14.03□□□□□ -0.16
CHPF2-201ENST00000035307 JCADQ9P266 1359 aa14.03□□□□□ -0.16
CHPF2-201ENST00000035307 PDE8BO95263 885 aa14.03□□□□□ -0.16
CHPF2-201ENST00000035307 NYXQ9GZU5 481 aa14.03□□□□□ -0.16
CHPF2-201ENST00000035307 SHPRHQ149N8 1683 aa14.03□□□□□ -0.16
CHPF2-201ENST00000035307 CAMTA1Q9Y6Y1 1673 aa14.03□□□□□ -0.16
CHPF2-201ENST00000035307 DHX8Q14562 1220 aaKnown RBP14.03□□□□□ -0.16
CHPF2-201ENST00000035307 FOXO4P98177 505 aa14.02□□□□□ -0.16
CHPF2-201ENST00000035307 CCAR1Q8IX12 1150 aaKnown RBP14.02□□□□□ -0.16
CHPF2-201ENST00000035307 CEP57L1Q8IYX8 460 aa14.02□□□□□ -0.16
CHPF2-201ENST00000035307 GPHNQ9NQX3 736 aaPredicted RBP14.02□□□□□ -0.16
CHPF2-201ENST00000035307 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.16
CHPF2-201ENST00000035307 UQCRFS1P1P0C7P4 283 aa14.02□□□□□ -0.17
CHPF2-201ENST00000035307 ATP5JP18859 108 aa14.02□□□□□ -0.17
CHPF2-201ENST00000035307 EIF6P56537 245 aaKnown RBP14.02□□□□□ -0.17
CHPF2-201ENST00000035307 SPATA5Q8NB90 893 aa14.02□□□□□ -0.17
CHPF2-201ENST00000035307 MCM9Q9NXL9 1143 aa14.02□□□□□ -0.17
CHPF2-201ENST00000035307 PRKAB2O43741 272 aa14.02□□□□□ -0.17
CHPF2-201ENST00000035307 ECM2O94769 699 aaPredicted RBP14.02□□□□□ -0.17
CHPF2-201ENST00000035307 HIBADHP31937 336 aaKnown RBP14.02□□□□□ -0.17
CHPF2-201ENST00000035307 ANO6Q4KMQ2 910 aa14.02□□□□□ -0.17
CHPF2-201ENST00000035307 SERPINB2P05120 415 aa14.01□□□□□ -0.17
CHPF2-201ENST00000035307 LUZP1Q86V48 1076 aa14.01□□□□□ -0.17
CHPF2-201ENST00000035307 LPIN2Q92539 896 aa14.01□□□□□ -0.17
CHPF2-201ENST00000035307 PRC1O43663 620 aa14.01□□□□□ -0.17
CHPF2-201ENST00000035307 CFAP100Q494V2 611 aa14.01□□□□□ -0.17
CHPF2-201ENST00000035307 COL5A2P05997 1499 aaPredicted RBP14.01□□□□□ -0.17
CHPF2-201ENST00000035307 MFSD6Q6ZSS7 791 aa14.01□□□□□ -0.17
CHPF2-201ENST00000035307 RUFY3Q7L099 469 aa14.01□□□□□ -0.17
CHPF2-201ENST00000035307 CYP2D7A0A087X1C5 515 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 TSPY2A6NKD2 308 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 SCNN1DP51172 638 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 DEFB132Q7Z7B7 95 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 MNS1Q8NEH6 495 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 RAD50Q92878 1312 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 SLC26A6Q9BXS9 759 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 PUS7LQ9H0K6 701 aaKnown RBP14□□□□□ -0.17
CHPF2-201ENST00000035307 CLIP2Q9UDT6 1046 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 ATP10DQ9P241 1426 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 GOLGA8AA7E2F4 631 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 CDC37L1Q7L3B6 337 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 PIK3C2AO00443 1686 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 ERBB4Q15303 1308 aa14□□□□□ -0.17
CHPF2-201ENST00000035307 MAGEB6P1A0A0J9YX57 407 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 MMP10P09238 476 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 GTF2IP78347 998 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 TCP10Q12799 353 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 TTF1Q15361 905 aaPredicted RBP13.99□□□□□ -0.17
CHPF2-201ENST00000035307 VPS72Q15906 364 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
CHPF2-201ENST00000035307 OSBP2Q969R2 916 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 HOOK1Q9UJC3 728 aaKnown RBP13.99□□□□□ -0.17
CHPF2-201ENST00000035307 USP32Q8NFA0 1604 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 XBP1P17861 261 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 ZNF771Q7L3S4 317 aaPredicted RBP13.99□□□□□ -0.17
CHPF2-201ENST00000035307 TRMT1LQ7Z2T5 733 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms