RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
USH1C-201ENST00000005226 CYP27B1O15528 508 aa16.34■□□□□ 0.21
USH1C-201ENST00000005226 LMOD1P29536 600 aaPredicted RBP16.34■□□□□ 0.21
USH1C-201ENST00000005226 GOLGA8FQ08AF8 430 aa16.34■□□□□ 0.21
USH1C-201ENST00000005226 GOLGA8DPQ0D2H9 430 aa16.34■□□□□ 0.21
USH1C-201ENST00000005226 WASHC4Q2M389 1173 aa16.34■□□□□ 0.21
USH1C-201ENST00000005226 ADALQ6DHV7 355 aa16.34■□□□□ 0.21
USH1C-201ENST00000005226 C8orf76Q96K31 380 aa16.34■□□□□ 0.21
USH1C-201ENST00000005226 AIFM3Q96NN9 605 aa16.34■□□□□ 0.21
USH1C-201ENST00000005226 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
USH1C-201ENST00000005226 RTEL1Q9NZ71 1219 aa16.34■□□□□ 0.21
USH1C-201ENST00000005226 LAMA4Q16363 1823 aa16.34■□□□□ 0.21
USH1C-201ENST00000005226 A0A1B0GUL7 405 aa16.33■□□□□ 0.21
USH1C-201ENST00000005226 NBPF26B4DH59 902 aa16.33■□□□□ 0.21
USH1C-201ENST00000005226 ZRSR1Q15695 479 aaKnown RBP16.33■□□□□ 0.21
USH1C-201ENST00000005226 GORABQ5T7V8 394 aa16.33■□□□□ 0.21
USH1C-201ENST00000005226 NBPF14Q5TI25 921 aa16.33■□□□□ 0.21
USH1C-201ENST00000005226 NBPF10Q6P3W6 841 aaKnown RBP16.33■□□□□ 0.21
USH1C-201ENST00000005226 ANKLE2Q86XL3 938 aa16.33■□□□□ 0.21
USH1C-201ENST00000005226 NBPF15Q8N660 670 aa16.33■□□□□ 0.21
USH1C-201ENST00000005226 ZNF274Q96GC6 653 aaPredicted RBP16.33■□□□□ 0.21
USH1C-201ENST00000005226 KLF18A0A0U1RQI7 1052 aa16.33■□□□□ 0.2
USH1C-201ENST00000005226 ATP1A3P13637 1013 aa16.33■□□□□ 0.2
USH1C-201ENST00000005226 ADORA1P30542 326 aa16.33■□□□□ 0.2
USH1C-201ENST00000005226 ERCC6LQ2NKX8 1250 aa16.33■□□□□ 0.2
USH1C-201ENST00000005226 NKX2-3Q8TAU0 364 aa16.33■□□□□ 0.2
USH1C-201ENST00000005226 NAT10Q9H0A0 1025 aaKnown RBP16.33■□□□□ 0.2
USH1C-201ENST00000005226 ORC3Q9UBD5 711 aaPredicted RBP16.33■□□□□ 0.2
USH1C-201ENST00000005226 MORC2Q9Y6X9 1032 aaPredicted RBP16.33■□□□□ 0.2
USH1C-201ENST00000005226 OVOS2A0A0G2JMS6 1433 aa16.33■□□□□ 0.2
USH1C-201ENST00000005226 ZNF397Q8NF99 534 aaPredicted RBP16.32■□□□□ 0.2
USH1C-201ENST00000005226 NEDD4P46934 1319 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 SPTLC2O15270 562 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 FOXP2O15409 715 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 ZNF202O95125 648 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 A1BGP04217 495 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 RXRAP19793 462 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 PI16Q6UXB8 463 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 PLBD2Q8NHP8 589 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 PPP1R13BQ96KQ4 1090 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 GOLGA8BA8MQT2 603 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 H7C1W4 665 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 PRC1O43663 620 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 KIF20AO95235 890 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 SLU7O95391 586 aaKnown RBP16.32■□□□□ 0.2
USH1C-201ENST00000005226 SLC3A2P08195 630 aaKnown RBP16.32■□□□□ 0.2
USH1C-201ENST00000005226 SLFN14P0C7P3 912 aa16.32■□□□□ 0.2
USH1C-201ENST00000005226 WDHD1O75717 1129 aaPredicted RBP16.31■□□□□ 0.2
USH1C-201ENST00000005226 CABP4P57796 275 aa16.31■□□□□ 0.2
USH1C-201ENST00000005226 SCARF1Q14162 830 aa16.31■□□□□ 0.2
USH1C-201ENST00000005226 ZNF446Q9NWS9 450 aa16.31■□□□□ 0.2
USH1C-201ENST00000005226 HPS5Q9UPZ3 1129 aa16.31■□□□□ 0.2
USH1C-201ENST00000005226 SIPA1L3O60292 1781 aaPredicted RBP16.31■□□□□ 0.2
USH1C-201ENST00000005226 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
USH1C-201ENST00000005226 FGAP02671 866 aa16.31■□□□□ 0.2
USH1C-201ENST00000005226 DPF2Q92785 391 aa16.31■□□□□ 0.2
USH1C-201ENST00000005226 NCAPHQ15003 741 aa16.3■□□□□ 0.2
USH1C-201ENST00000005226 HSP90AA4PQ58FG1 418 aa16.3■□□□□ 0.2
USH1C-201ENST00000005226 MYSM1Q5VVJ2 828 aa16.3■□□□□ 0.2
USH1C-201ENST00000005226 ERO1AQ96HE7 468 aa16.3■□□□□ 0.2
USH1C-201ENST00000005226 OSBPL5Q9H0X9 879 aaPredicted RBP16.3■□□□□ 0.2
USH1C-201ENST00000005226 RFX7Q2KHR2 1363 aa16.3■□□□□ 0.2
USH1C-201ENST00000005226 PFKFB1P16118 471 aa16.3■□□□□ 0.2
USH1C-201ENST00000005226 ATL3Q6DD88 541 aa16.3■□□□□ 0.2
USH1C-201ENST00000005226 FBXO18Q8NFZ0 1043 aa16.3■□□□□ 0.2
USH1C-201ENST00000005226 EYA2O00167 538 aa16.29■□□□□ 0.2
USH1C-201ENST00000005226 GSDMDP57764 484 aa16.29■□□□□ 0.2
USH1C-201ENST00000005226 ANTXR2P58335 489 aa16.29■□□□□ 0.2
USH1C-201ENST00000005226 PUS7LQ9H0K6 701 aaKnown RBP16.29■□□□□ 0.2
USH1C-201ENST00000005226 ZNF330Q9Y3S2 320 aaPredicted RBP16.29■□□□□ 0.2
USH1C-201ENST00000005226 MEGF6O75095 1541 aa16.29■□□□□ 0.2
USH1C-201ENST00000005226 A0A1W2PQ27 194 aa16.29■□□□□ 0.2
USH1C-201ENST00000005226 A0A1W2PQ64 194 aa16.29■□□□□ 0.2
USH1C-201ENST00000005226 A0A1W2PQD8 194 aa16.29■□□□□ 0.2
USH1C-201ENST00000005226 CPLX1O14810 134 aa16.29■□□□□ 0.2
USH1C-201ENST00000005226 SFPQP23246 707 aaKnown RBP eCLIP16.29■□□□□ 0.2
USH1C-201ENST00000005226 IL15P40933 162 aaPredicted RBP16.29■□□□□ 0.2
USH1C-201ENST00000005226 SYNE3Q6ZMZ3 975 aa16.29■□□□□ 0.2
USH1C-201ENST00000005226 CWC25Q9NXE8 425 aaPredicted RBP16.29■□□□□ 0.2
USH1C-201ENST00000005226 MROH7-TTC4A0A0A0MT08 1334 aa16.29■□□□□ 0.2
USH1C-201ENST00000005226 AXDND1Q5T1B0 1012 aaPredicted RBP16.28■□□□□ 0.2
USH1C-201ENST00000005226 HOMER1Q86YM7 354 aa16.28■□□□□ 0.2
USH1C-201ENST00000005226 UBE2Q2LH0YL09 131 aa16.28■□□□□ 0.2
USH1C-201ENST00000005226 NLRP12P59046 1061 aa16.28■□□□□ 0.2
USH1C-201ENST00000005226 FANCCQ00597 558 aa16.28■□□□□ 0.2
USH1C-201ENST00000005226 ANO1Q5XXA6 986 aa16.28■□□□□ 0.2
USH1C-201ENST00000005226 KRT222Q8N1A0 295 aa16.28■□□□□ 0.2
USH1C-201ENST00000005226 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
USH1C-201ENST00000005226 AFDNP55196 1824 aaKnown RBP16.28■□□□□ 0.2
USH1C-201ENST00000005226 KCNG4Q8TDN1 519 aa16.27■□□□□ 0.2
USH1C-201ENST00000005226 CLIC6Q96NY7 704 aa16.27■□□□□ 0.2
USH1C-201ENST00000005226 TMX1Q9H3N1 280 aa16.27■□□□□ 0.2
USH1C-201ENST00000005226 ZAP70P43403 619 aa16.27■□□□□ 0.19
USH1C-201ENST00000005226 FAM177A1Q8N128 213 aaPredicted RBP16.27■□□□□ 0.19
USH1C-201ENST00000005226 STK11IPQ8N1F8 1099 aa16.27■□□□□ 0.19
USH1C-201ENST00000005226 DCAF5Q96JK2 942 aa16.27■□□□□ 0.19
USH1C-201ENST00000005226 HSD3B7Q9H2F3 369 aa16.27■□□□□ 0.19
USH1C-201ENST00000005226 SENP2Q9HC62 589 aa16.27■□□□□ 0.19
USH1C-201ENST00000005226 DNAI1Q9UI46 699 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms