RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Lnx1O70263 728 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 NapbP28663 298 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Casc1Q6TDU8 730 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Nap1l3Q794H2 544 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ppp6r1Q7TSI3 856 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ccdc178Q8CDV0 866 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Afg3l2Q8JZQ2 802 aaKnown RBP12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ttc14Q9CSP9 761 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ltbp1Q8CG19 1712 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Sik3Q6P4S6 1311 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Lipo1J3QME6 396 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Bach1P97302 739 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Leo1Q5XJE5 667 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Zfp113Q8C689 439 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Atad2Q8CDM1 1040 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Sde2Q8K1J5 448 aaKnown RBP12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Slc14a2Q8R4T9 930 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ankrd31A0A140LI88 1765 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ube4aE9Q735 1028 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Wdr93Q402B2 695 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Rbm15bQ6PHZ5 887 aaKnown RBP12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Alg3Q8K2A8 438 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Eaf2Q91ZD6 262 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 NsmfQ99NF2 532 aa12.67□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Npy5rO70342 466 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Slc4a4O88343 1079 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 GalcP54818 684 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Exosc10P56960 887 aaKnown RBP12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 DymQ8CHY3 669 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Slc51aQ8R000 340 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Rbm43Q99J64 343 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Letm1Q9Z2I0 738 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Rps8P62242 208 aaKnown RBP12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Rtkn2Q14B46 604 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ppp1r21Q3TDD9 780 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Cyp24a1Q64441 514 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Polr3gQ6NXY9 223 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Limch1Q3UH68 1057 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 ImmtQ8CAQ8 757 aaKnown RBP12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Rufy2Q8R4C2 606 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Zbtb43Q9DAI4 467 aa12.66□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Arap2Q8BZ05 1703 aa12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Mast3Q3U214 1321 aa12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 4930523C07RikE9Q2T4 99 aa12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Kat6bQ8BRB7 1872 aa12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Lrrc2Q8VDB8 371 aa12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 FliiQ9JJ28 1271 aa12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Znf326O88291 580 aa12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Esyt1Q3U7R1 1092 aaKnown RBP12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Cdcp1Q5U462 833 aa12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Amhr2Q8K592 568 aa12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 McamQ8R2Y2 648 aaKnown RBP12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 BrapQ99MP8 591 aa12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Ndufa8Q9DCJ5 172 aa12.65□□□□□ -0.38
Pcdh20-202ENSMUST00000192557 Nhsl1Q8CAF4 1587 aa12.65□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 CebpaP53566 359 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Dynll1P63168 89 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Prr29B1ARI9 187 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Sumf1Q8R0F3 372 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Odf2lQ9D478 642 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Adarb2Q9JI20 745 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Prss40A6H6T1 365 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Me1P06801 572 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 NfixP70257 488 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Pald1P70261 859 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Fchsd1Q6PFY1 688 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Tmem59lQ7TNI2 337 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 CpzQ8R4V4 654 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Aox1O54754 1333 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Abca3Q8R420 1704 aa12.64□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Greb1lB9EJV3 1913 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Ankrd63A2ARS0 390 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Cfap69Q8BH53 942 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Ncaph2Q8BSP2 607 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Nup88Q8CEC0 753 aaKnown RBP12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Wdr24Q8CFJ9 790 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Sh3bp5lQ99LH9 392 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Kiaa0319Q5SZV5 1081 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Abtb2Q7TQI7 1024 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 U2af1l4Q8BGJ9 220 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 BccipQ9CWI3 316 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Izumo3A6PWV3 263 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Dhx16G3X8X0 1044 aaKnown RBP12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Siah1aP61092 282 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Cypt2Q6P924 180 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 9230110C19RikQ8CC70 267 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Sf3b3Q921M3 1217 aaKnown RBP12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Mrpl44Q9CY73 333 aaKnown RBP12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Erich6bQ9D4S6 220 aa12.63□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Kndc1Q0KK55 1742 aa12.62□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Ube2hP62257 183 aa12.62□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Slc7a3P70423 618 aa12.62□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Ccdc82Q6PG04 518 aa12.62□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Bicd2Q921C5 820 aa12.62□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Carmil3Q3UFQ8 1375 aa12.62□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Oas2E9Q9A9 742 aa12.62□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Stat5bP42232 786 aa12.62□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Otop3Q80UF9 577 aa12.62□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Zfp317Q8C0Q5 607 aa12.62□□□□□ -0.39
Pcdh20-202ENSMUST00000192557 Dpf1Q9QX66 387 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms