RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Zkscan5Q9Z1D8 819 aa12.52□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Syde2E9PUP1 1314 aa12.52□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Tbc1d4Q8BYJ6 1307 aa12.52□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Nhsl1Q8CAF4 1587 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Mctp2Q5RJH2 878 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Nlrp9bQ66X22 1003 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Frat2Q8K025 231 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 StrbpQ91WM1 672 aaKnown RBP12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Ginm1Q91WR6 327 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Nwd2Q6P5U7 1742 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Tnrc6cQ3UHC0 1690 aaKnown RBP12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Shank2Q80Z38 1476 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 TrdnE9Q9K5 693 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Emilin2Q8K482 1074 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Golph3lQ8R088 285 aaKnown RBP12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 PhaxQ9JJT9 385 aaKnown RBP12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Irx5Q9JKQ4 484 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Hmg20bQ9Z104 317 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Tjp1P39447 1745 aaKnown RBP12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Znf568E9PYI1 671 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Serpinb6bO08804 377 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Smg7Q5RJH6 1138 aaKnown RBP12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 DbnlQ62418 436 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Q8C5K5 320 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Ddx27Q921N6 760 aaKnown RBP12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Pus3Q9JI38 481 aa12.51□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Mst1rQ62190 1378 aa12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Rbbp8nlA2ABX0 614 aa12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Vps54Q5SPW0 977 aa12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Dusp10Q9ESS0 483 aa12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 LratQ9JI60 231 aa12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Hdac6Q9Z2V5 1149 aa12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Cacna1sQ02789 1880 aa12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Stx1aO35526 288 aa12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Bank1Q80VH0 783 aa12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Ppp1r10Q80W00 888 aaKnown RBP12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Dhx38Q80X98 1228 aa12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Gpatch3Q8BIY1 525 aa12.5□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Cypt2Q6P924 180 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Flad1Q8R123 492 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Tmx1Q8VBT0 278 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Lrrfip2Q91WK0 415 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Tubb6Q922F4 447 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Ccdc112A0AUP1 442 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Clec11aO88200 328 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Tpm1P58771 284 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 RubcnlQ3TD16 648 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Limch1Q3UH68 1057 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Nxf7Q80SZ6 620 aaKnown RBP12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Tmem87bQ8BKU8 555 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Kat6bQ8BRB7 1872 aa12.49□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Pus7B7ZNL8 666 aaKnown RBP12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 NmiO35309 314 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Prl7a2O54831 253 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Tiam2Q6ZPF3 1715 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Odf2lQ9D478 642 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Fsd1Q7TPM6 496 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Ripor2Q80U16 1078 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Nek11Q8C0Q4 628 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 InhbeO08717 350 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 XpcP51612 930 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Morc2aQ69ZX6 1030 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Q8BZJ8 459 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Lmbrd2Q8C561 694 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Ccdc158Q8CDI6 1109 aa12.48□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 MypnQ5DTJ9 1315 aa12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Prr29B1ARI9 187 aa12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Surf1P09925 306 aa12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Dhx40Q6PE54 779 aaKnown RBP12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Dis3l2Q8CI75 870 aaKnown RBP12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Snw1Q9CSN1 536 aaKnown RBP12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 PappaQ8R4K8 1624 aa12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Ubn2Q80WC1 1314 aa12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 InsrrQ9WTL4 1300 aa12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Soga3Q6NZL0 945 aa12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Ccdc82Q6PG04 518 aa12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Dcaf5Q80T85 946 aa12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Pms1Q8K119 917 aa12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Mtmr3Q8K296 1196 aa12.47□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Paxbp1P58501 919 aa12.46□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Znf532Q6NXK2 1036 aa12.46□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Hps3Q91VB4 1002 aa12.46□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Xpo4Q9ESJ0 1151 aa12.46□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Ltbp1Q8CG19 1712 aa12.46□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 GakQ99KY4 1305 aa12.46□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Shank3Q4ACU6 1730 aa12.46□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Lcmt1A0A0U1RNF2 332 aa12.46□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Mrpl44Q9CY73 333 aaKnown RBP12.46□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Ltv1Q6NSQ7 470 aaKnown RBP12.46□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Fam84aQ9D650 292 aa12.46□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Gnat3Q3V3I2 354 aa12.45□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Fkbp5Q64378 456 aa12.45□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Dnaaf4Q8R368 420 aa12.45□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 NpeppsQ11011 920 aa12.45□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Exoc8Q6PGF7 716 aa12.45□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Anks1aP59672 1150 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Adam1aQ60813 791 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Pnpla2Q8BJ56 486 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Vps18Q8R307 973 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Luzp1Q8R4U7 1068 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms