RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Terf2ipQ91VL8 393 aa28.15■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Polr3gQ6NXY9 223 aa28.14■■■□□ 2.1
Ubp1-203ENSMUST00000116492 Osbpl5Q9ER64 874 aa28.14■■■□□ 2.1
Ubp1-203ENSMUST00000116492 U2af1l4Q8BGJ9 220 aa28.13■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Srek1Q8BZX4 494 aaKnown RBP28.13■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Alg3Q8K2A8 438 aa28.13■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Ubxn4Q8VCH8 506 aa28.13■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Cnot6lQ8VEG6 555 aa28.13■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Hmx1O70218 332 aa28.13■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Cyp2d9P11714 504 aa28.13■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Gse1Q3U3C9 1213 aa28.13■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Mknk2Q8CDB0 459 aa28.13■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Snrpa1P57784 255 aaKnown RBP28.12■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Ppfia3P60469 1194 aa28.12■■■□□ 2.09
Ubp1-203ENSMUST00000116492 TrhQ62361 256 aa28.12■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Esco1Q69Z69 843 aa28.12■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Oxsr1Q6P9R2 527 aa28.12■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Naa16Q9DBB4 864 aa28.12■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Tpcn2Q8BWC0 731 aa28.12■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Trim34aQ99PP6 485 aa28.12■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Cdc45Q9Z1X9 566 aa28.12■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Aox4Q3TYQ9 1336 aa28.11■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Clec11aO88200 328 aa28.11■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Bach1P97302 739 aa28.11■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Kiaa0753Q6A000 959 aa28.11■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Gpatch3Q8BIY1 525 aa28.11■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Kat6bQ8BRB7 1872 aa28.11■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Kansl3A2RSY1 903 aaKnown RBP28.1■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Cyp3a59D3Z2W7 503 aa28.1■■■□□ 2.09
Ubp1-203ENSMUST00000116492 NcapgE9PWG6 1004 aa28.1■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Speer4dL7N216 212 aa28.1■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Gm4340L7N2C4 268 aa28.1■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Hook1Q8BIL5 728 aa28.1■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Mast3Q3U214 1321 aa28.1■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Nop14Q8R3N1 860 aaKnown RBP28.1■■■□□ 2.09
Ubp1-203ENSMUST00000116492 4931408C20RikE9PWP9 1381 aa28.1■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Rrp1P56183 494 aaKnown RBP28.09■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Ttc14Q9CSP9 761 aa28.09■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Slf2Q6P9P0 1278 aa28.09■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Susd4Q8BH32 490 aa28.09■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Snw1Q9CSN1 536 aaKnown RBP28.09■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Telo2Q9DC40 840 aaKnown RBP28.09■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Cfap44E9Q5M6 1843 aa28.08■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Znf526Q8BI66 675 aa28.08■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Ccer1Q9CQL2 403 aa28.08■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Zbtb43Q9DAI4 467 aa28.08■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Mast2Q60592 1734 aa28.08■■■□□ 2.09
Ubp1-203ENSMUST00000116492 Gm20425E9Q035 978 aaKnown RBP28.07■■■□□ 2.08
Ubp1-203ENSMUST00000116492 SrprbP47758 269 aa28.07■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Kcnq3Q8K3F6 873 aa28.07■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Ubn2Q80WC1 1314 aa28.07■■■□□ 2.08
Ubp1-203ENSMUST00000116492 SdsQ8VBT2 327 aa28.07■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Pm20d1Q8C165 503 aa28.06■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Gpr108Q91WD0 569 aa28.06■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Mroh6V9GX81 722 aa28.06■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Casp12O08736 419 aa28.05■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Tbc1d7Q9D0K0 293 aa28.05■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Tulp1Q9Z273 543 aa28.05■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Tcof1O08784 1320 aaKnown RBP28.05■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Ccng2O08918 344 aa28.04■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Nucb2P81117 420 aa28.04■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Ddb1Q3U1J4 1140 aaKnown RBP28.04■■■□□ 2.08
Ubp1-203ENSMUST00000116492 CrebrfQ8CDG5 640 aaKnown RBP28.04■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Krt84Q99M73 603 aa28.04■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Sept12Q9D451 317 aa28.04■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Med23Q80YQ2 1367 aa28.04■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Pla2g4fQ50L41 855 aa28.04■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Lipo1J3QME6 396 aa28.03■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Vps33bP59016 617 aa28.03■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Yeats4Q9CR11 227 aaKnown RBP28.03■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Stx1aO35526 288 aa28.03■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Atp1a3Q6PIC6 1013 aa28.03■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Kcnf1Q7TSH7 493 aa28.03■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Ccdc47Q9D024 483 aaKnown RBP28.03■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Miga2Q8BK03 593 aa28.02■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Pcdhb15Q91Y04 786 aa28.02■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Pdia4P08003 638 aaKnown RBP28.01■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Cdkl5Q3UTQ8 938 aa28.01■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Acap3Q6NXL5 833 aa28.01■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Bcl2l12Q9D3J3 255 aa28.01■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Lama4P97927 1816 aa28.01■■■□□ 2.08
Ubp1-203ENSMUST00000116492 Metap2O08663 478 aaKnown RBP28.01■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Cyp26a1O55127 497 aa28.01■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Ifit1bl2Q3U687 466 aa28.01■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Gm28047Q3US59 414 aa28.01■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Ripk4Q9ERK0 786 aa28.01■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Slfnl1Q8BHW9 410 aa28■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Stk38Q91VJ4 465 aa28■■■□□ 2.07
Ubp1-203ENSMUST00000116492 CpdO89001 1377 aa28■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Dctn1O08788 1281 aa28■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Pde6aP27664 859 aa28■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Clic4Q9QYB1 253 aa28■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Cplx2P84086 134 aa27.99■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Washc4Q3UMB9 1173 aa27.99■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Bola3Q8CEI1 110 aa27.99■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Dusp10Q9ESS0 483 aa27.99■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Rcan1Q9JHG6 198 aa27.99■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Rgs12Q8CGE9 1381 aa27.99■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Me1P06801 572 aa27.98■■■□□ 2.07
Ubp1-203ENSMUST00000116492 Prdm1Q60636 856 aa27.98■■■□□ 2.07
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms