RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Gm4340L7N2C4 268 aa14.96□□□□□ -0.01
Trim50-202ENSMUST00000111180 Slc4a1P04919 929 aa14.96□□□□□ -0.01
Trim50-202ENSMUST00000111180 Nol8Q3UHX0 1147 aaKnown RBP14.96□□□□□ -0.01
Trim50-202ENSMUST00000111180 Ppp4r3bQ922R5 820 aa14.96□□□□□ -0.01
Trim50-202ENSMUST00000111180 Col1a1P11087 1453 aa14.96□□□□□ -0.01
Trim50-202ENSMUST00000111180 TnksQ6PFX9 1320 aa14.96□□□□□ -0.02
Trim50-202ENSMUST00000111180 Terf1P70371 421 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Vps54Q5SPW0 977 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Abtb2Q7TQI7 1024 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Prune1Q8BIW1 454 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Rnf123Q5XPI3 1314 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Rabep1O35551 862 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Bend4P86174 541 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Zbtb45Q52KG4 520 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Znf496Q5SXI5 585 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Ppm1gQ61074 542 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Ddx11Q6AXC6 880 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Gm2163Q6PCY5 473 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 Tmem67Q8BR76 992 aa14.95□□□□□ -0.02
Trim50-202ENSMUST00000111180 NynrinQ5DTZ0 1840 aa14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 Nrxn2E9Q7X7 1710 aa14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 Kifc2O08672 792 aa14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 AaasP58742 546 aa14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 Rps12P63323 132 aaKnown RBP14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 EspnlQ3UYR4 1005 aa14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 ZyxQ62523 564 aa14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 Nlrp9aQ66X03 949 aa14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 Ppip5k2Q6ZQB6 1129 aa14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 Ascc2Q91WR3 749 aa14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 Igf2bp3Q9CPN8 579 aaKnown RBP14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 Ccne2Q9Z238 404 aa14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 Mtmr2Q9Z2D1 643 aa14.94□□□□□ -0.02
Trim50-202ENSMUST00000111180 Arfgef1G3X9K3 1846 aaKnown RBP14.93□□□□□ -0.02
Trim50-202ENSMUST00000111180 Ppfia1B2RXQ2 1266 aa14.93□□□□□ -0.02
Trim50-202ENSMUST00000111180 Prl3d1P18121 224 aa14.93□□□□□ -0.02
Trim50-202ENSMUST00000111180 CalcaP70160 136 aa14.93□□□□□ -0.02
Trim50-202ENSMUST00000111180 CbarpQ66L44 698 aa14.93□□□□□ -0.02
Trim50-202ENSMUST00000111180 Znf18Q810A1 556 aa14.93□□□□□ -0.02
Trim50-202ENSMUST00000111180 Ufl1Q8CCJ3 793 aaKnown RBP14.93□□□□□ -0.02
Trim50-202ENSMUST00000111180 Ube3bQ9ES34 1070 aa14.93□□□□□ -0.02
Trim50-202ENSMUST00000111180 PhaxQ9JJT9 385 aaKnown RBP14.93□□□□□ -0.02
Trim50-202ENSMUST00000111180 Fzd9Q9R216 592 aa14.93□□□□□ -0.02
Trim50-202ENSMUST00000111180 Myh7Q91Z83 1935 aa14.93□□□□□ -0.02
Trim50-202ENSMUST00000111180 MccE9PWI3 1003 aa14.92□□□□□ -0.02
Trim50-202ENSMUST00000111180 Csrnp1P59054 583 aa14.92□□□□□ -0.02
Trim50-202ENSMUST00000111180 GorabQ8BRM2 368 aa14.92□□□□□ -0.02
Trim50-202ENSMUST00000111180 Golim4Q8BXA1 655 aa14.92□□□□□ -0.02
Trim50-202ENSMUST00000111180 Osbpl5Q9ER64 874 aa14.92□□□□□ -0.02
Trim50-202ENSMUST00000111180 ParvgQ9ERD8 331 aa14.92□□□□□ -0.02
Trim50-202ENSMUST00000111180 Myh3P13541 1940 aa14.91□□□□□ -0.02
Trim50-202ENSMUST00000111180 Cyp3a57D3YYZ0 503 aa14.91□□□□□ -0.02
Trim50-202ENSMUST00000111180 D1Pas1P16381 660 aa14.91□□□□□ -0.02
Trim50-202ENSMUST00000111180 LeprP48356 1162 aa14.91□□□□□ -0.02
Trim50-202ENSMUST00000111180 Large2Q5XPT3 690 aa14.91□□□□□ -0.02
Trim50-202ENSMUST00000111180 Il17raQ60943 864 aa14.91□□□□□ -0.02
Trim50-202ENSMUST00000111180 Sptlc3Q8BG54 563 aa14.91□□□□□ -0.02
Trim50-202ENSMUST00000111180 Myh15E9Q264 1925 aa14.9□□□□□ -0.02
Trim50-202ENSMUST00000111180 Ddx31Q6NZQ2 687 aaKnown RBP14.9□□□□□ -0.02
Trim50-202ENSMUST00000111180 Nme8Q715T0 586 aa14.9□□□□□ -0.02
Trim50-202ENSMUST00000111180 HdlbpQ8VDJ3 1268 aaKnown RBP14.9□□□□□ -0.02
Trim50-202ENSMUST00000111180 Bmp2kQ91Z96 1138 aa14.9□□□□□ -0.02
Trim50-202ENSMUST00000111180 Erc1Q99MI1 1120 aa14.9□□□□□ -0.02
Trim50-202ENSMUST00000111180 Mrpl12Q9DB15 201 aaKnown RBP14.9□□□□□ -0.02
Trim50-202ENSMUST00000111180 Celf2Q9Z0H4 508 aaKnown RBP14.9□□□□□ -0.02
Trim50-202ENSMUST00000111180 Ecm29Q6PDI5 1840 aa14.9□□□□□ -0.02
Trim50-202ENSMUST00000111180 Rbbp6P97868 1790 aaKnown RBP14.9□□□□□ -0.02
Trim50-202ENSMUST00000111180 Izumo3A6PWV3 263 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Gm10093D3YYI8 482 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Hdac1O09106 482 aaKnown RBP14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Cxcl9P18340 126 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Casp1P29452 402 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Tmem130Q6NXM3 419 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Top1mtQ8R4U6 593 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Telo2Q9DC40 840 aaKnown RBP14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Usp34Q6ZQ93 3582 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Rad50P70388 1312 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Usp17lbE9Q9U0 468 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Prl7d1P04769 244 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Q3UJP5 209 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Fchsd1Q6PFY1 688 aa14.89□□□□□ -0.03
Trim50-202ENSMUST00000111180 Hap1O35668 628 aa14.88□□□□□ -0.03
Trim50-202ENSMUST00000111180 Cap1P40124 474 aa14.88□□□□□ -0.03
Trim50-202ENSMUST00000111180 Slc7a3P70423 618 aa14.88□□□□□ -0.03
Trim50-202ENSMUST00000111180 Shtn1Q8K2Q9 631 aa14.88□□□□□ -0.03
Trim50-202ENSMUST00000111180 Tm4sf4Q91XD3 202 aa14.88□□□□□ -0.03
Trim50-202ENSMUST00000111180 Ipo9Q91YE6 1041 aa14.88□□□□□ -0.03
Trim50-202ENSMUST00000111180 Rbm33Q9CXK9 1231 aaKnown RBP14.88□□□□□ -0.03
Trim50-202ENSMUST00000111180 Myh4Q5SX39 1939 aa14.87□□□□□ -0.03
Trim50-202ENSMUST00000111180 NinQ61043 2035 aa14.87□□□□□ -0.03
Trim50-202ENSMUST00000111180 Rhbdl3P58873 404 aa14.87□□□□□ -0.03
Trim50-202ENSMUST00000111180 Ankrd13cQ3UX43 541 aa14.87□□□□□ -0.03
Trim50-202ENSMUST00000111180 Agtpbp1Q641K1 1218 aa14.87□□□□□ -0.03
Trim50-202ENSMUST00000111180 WdpcpQ8C456 722 aa14.87□□□□□ -0.03
Trim50-202ENSMUST00000111180 Sh3bp5lQ99LH9 392 aa14.87□□□□□ -0.03
Trim50-202ENSMUST00000111180 Ppil2Q9D787 521 aa14.87□□□□□ -0.03
Trim50-202ENSMUST00000111180 Irs4Q9Z0Y7 1216 aa14.87□□□□□ -0.03
Trim50-202ENSMUST00000111180 Myh13B1AR69 1938 aa14.86□□□□□ -0.03
Trim50-202ENSMUST00000111180 A0A1W2P7S8 802 aa14.86□□□□□ -0.03
Trim50-202ENSMUST00000111180 MecomP14404 1042 aa14.86□□□□□ -0.03
Trim50-202ENSMUST00000111180 Mdm2P23804 489 aa14.86□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms