RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Ripk4Q9ERK0 786 aa36.9■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 EspnQ9ET47 871 aa36.9■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 FliiQ9JJ28 1271 aa36.9■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Gm3893E9Q1I1 302 aa36.89■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Dcdc2bF7BCK0 340 aa36.89■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Ecm29Q6PDI5 1840 aa36.89■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Large2Q5XPT3 690 aa36.88■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Myh3P13541 1940 aa36.88■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Supt16hQ920B9 1047 aa36.88■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Rps12P63323 132 aaKnown RBP36.87■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Pla2g4fQ50L41 855 aa36.87■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Rasgrp4Q8BTM9 673 aa36.87■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Cog6Q8R3I3 657 aa36.87■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Stk3Q9JI10 497 aa36.87■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Npc1l1Q6T3U4 1333 aa36.87■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Myh13B1AR69 1938 aa36.87■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Ppp2r3aB2RXC8 1150 aa36.86■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Krt40Q6IFX3 439 aa36.86■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Mxd3Q80US8 206 aa36.86■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Map10Q8BJS7 891 aa36.86■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Chd5A2A8L1 1946 aa36.86■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Glis2Q8VDL9 521 aa36.85■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Uba5Q8VE47 403 aa36.85■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 RestQ8VIG1 1082 aa36.85■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Phlpp2Q8BXA7 1320 aa36.84■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 AsnsQ61024 561 aa36.84■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Arid4aF8VPQ2 1261 aaKnown RBP36.83■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 GmpsQ3THK7 693 aa36.83■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Bms1Q6PGF5 1284 aaKnown RBP36.83■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Wdr43Q6ZQL4 677 aaKnown RBP36.83■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Pcdhb5Q91XZ5 792 aa36.83■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 NinQ61043 2035 aa36.83■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 NpeppsQ11011 920 aa36.82■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Cfap69Q8BH53 942 aa36.82■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 Ptrh1Q8BW00 204 aa36.82■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 MthfsQ9D110 203 aa36.82■■■■□ 3.49
Ctdnep1-201ENSMUST00000108593 NynrinQ5DTZ0 1840 aa36.82■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Zbtb7aO88939 569 aaKnown RBP36.81■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 SfswapQ3USH5 945 aaKnown RBP36.81■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Tnip1Q9WUU8 647 aa36.81■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Col20a1Q923P0 1320 aa36.81■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Adam7O35227 789 aa36.8■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 NyxP83503 476 aa36.8■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Slc10a5Q5PT54 434 aa36.8■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Col24a1Q30D77 1733 aa36.79■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Siah1aP61092 282 aa36.79■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Mboat7Q8CHK3 473 aa36.79■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 SafbD3YXK2 937 aaKnown RBP36.78■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Mmp14P53690 582 aa36.78■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Edrf1Q6GQV7 1239 aa36.78■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Dpp7Q9ET22 506 aa36.78■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Mical3Q8CJ19 1993 aa36.78■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Tmem67Q8BR76 992 aa36.77■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 ParnQ8VDG3 624 aa36.77■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Hdac9Q99N13 588 aa36.77■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Spata18Q0P557 537 aa36.77■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Rbm6S4R1W5 1118 aaKnown RBP36.77■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 CalcaP70160 136 aa36.76■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Npr3P70180 536 aa36.76■■■■□ 3.48
Ctdnep1-201ENSMUST00000108593 Bmp2kQ91Z96 1138 aa36.75■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 Q9D2X8 372 aa36.75■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 Agtpbp1Q641K1 1218 aa36.74■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 D1Pas1P16381 660 aa36.74■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 Sept12Q9D451 317 aa36.74■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 Mageb2A2AHM0 380 aa36.73■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 Ppp4r2Q0VGB7 417 aa36.73■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 Washc4Q3UMB9 1173 aa36.73■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 SpidrQ8BGX7 933 aa36.73■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 Cxcl11Q9JHH5 100 aa36.73■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 Cdcp1Q5U462 833 aa36.72■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 Prune1Q8BIW1 454 aa36.72■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 Olfm5Q8BU90 496 aa36.72■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 CenppQ9CZ92 286 aa36.72■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 CrkQ64010 304 aa36.71■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 Cyp24a1Q64441 514 aa36.71■■■■□ 3.47
Ctdnep1-201ENSMUST00000108593 GabreA2AMW3 916 aa36.69■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Cap1P40124 474 aa36.69■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Nkx1-2P42580 305 aa36.69■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Epb41l3Q9WV92 929 aa36.69■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Tm4sf1Q64302 202 aa36.68■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Appbp2Q9DAX9 585 aa36.68■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Jag1Q9QXX0 1218 aa36.68■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Nek4Q9Z1J2 792 aa36.68■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Map3k12Q60700 888 aa36.67■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Cnot7Q60809 285 aa36.67■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Ascc2Q91WR3 749 aa36.67■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Ndfip2Q91ZP6 311 aa36.67■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Pla2g12bQ99P27 195 aa36.67■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Ppil2Q9D787 521 aa36.67■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 IcoslgQ9JHJ8 322 aa36.67■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Pus3Q9JI38 481 aa36.67■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Pde4aO89084 844 aa36.67■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Esyt2Q3TZZ7 845 aa36.67■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Lmod1Q8BVA4 595 aa36.67■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Krt24A1L317 512 aa36.66■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Cyp2d10P24456 504 aa36.66■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Adgra3Q7TT36 1310 aa36.66■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Myh7Q91Z83 1935 aa36.65■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 LdhdQ7TNG8 484 aa36.65■■■■□ 3.46
Ctdnep1-201ENSMUST00000108593 Hps4Q99KG7 671 aa36.65■■■■□ 3.46
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms