RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Nup160Q9Z0W3 1402 aaKnown RBP11.55□□□□□ -0.56
Lig4-201ENSMUST00000095476 Zfp213E9QAW0 468 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Diaph2O70566 1098 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Nap1l2P51860 460 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Fhdc1Q3ULZ2 1149 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Ccdc160Q3UYG1 323 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Ncoa7Q6DFV7 943 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Tcp11l1Q8BTG3 509 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Tsnaxip1Q99P25 704 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Cep19Q9CQA8 163 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Ccdc91Q9D8L5 442 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Gm44503E9PYU5 387 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Epb41l2O70318 988 aaKnown RBP11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Atp1a3Q6PIC6 1013 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Cdc23Q8BGZ4 597 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Sar1bQ9CQC9 198 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 IqcdQ9D3V1 458 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Syce1Q9D495 329 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Pcdh10E9PXQ7 1057 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 ByslO54825 436 aaKnown RBP11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Hmgb1P63158 215 aaKnown RBP11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Map3k2Q61083 619 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Wdr44Q6NVE8 915 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Klhl40Q9D783 621 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Abcb6Q9DC29 842 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Cib2Q9Z309 187 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Magi1Q6RHR9 1471 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 TnnQ80Z71 1560 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Rnf40Q3U319 1001 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Irf9Q61179 399 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 Panx2Q6IMP4 677 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 RabggtaQ9JHK4 567 aa11.54□□□□□ -0.56
Lig4-201ENSMUST00000095476 EnahQ03173 802 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Krit1Q6S5J6 736 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 SltmQ8CH25 1031 aaKnown RBP11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Gbp7Q91Z40 638 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Stk11Q9WTK7 436 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Kcnh3Q9WVJ0 1095 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Pola1P33609 1465 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Slc12a2P55012 1205 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Stmn2P55821 179 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Traf3ip1Q149C2 625 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Zfyve27Q3TXX3 415 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 1700113H08RikE9Q9Q5 327 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Trim34bJ3QNR8 485 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Ier5O89113 308 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Csrnp1P59054 583 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Atp8b1Q148W0 1251 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Luc7l3Q5SUF2 432 aaKnown RBP11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Ccdc25Q78PG9 208 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Haus1Q8BHX1 278 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 DymQ8CHY3 669 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Cd209bQ8CJ91 325 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Desi2Q9D291 194 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Add3Q9QYB5 706 aaKnown RBP11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Swap70Q6A028 585 aaKnown RBP11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Ttc12Q8BW49 704 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Dnm3Q8BZ98 863 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Flad1Q8R123 492 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Usp11Q99K46 921 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 InsrP15208 1372 aa11.53□□□□□ -0.56
Lig4-201ENSMUST00000095476 Tpx2A2APB8 745 aaKnown RBP11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Gm1993A6X8I0 212 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 SlxD3Z347 212 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Kifc2O08672 792 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Irx2P81066 474 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Nlrp4cQ3TKR3 982 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Pabpn1lQ5XFR0 273 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Arhgef18Q6P9R4 1021 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Efcab14Q8BGQ6 484 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Rad23aP54726 363 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Prm3Q62100 101 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Zranb3Q6NZP1 1069 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Zranb1Q7M760 708 aa11.52□□□□□ -0.56
Lig4-201ENSMUST00000095476 Dnajc25A2ALW5 357 aa11.52□□□□□ -0.57
Lig4-201ENSMUST00000095476 ChkbO55229 394 aa11.52□□□□□ -0.57
Lig4-201ENSMUST00000095476 Ica1lQ3TY65 431 aa11.52□□□□□ -0.57
Lig4-201ENSMUST00000095476 Myom2Q14BI5 1463 aa11.52□□□□□ -0.57
Lig4-201ENSMUST00000095476 Klhl34A2AI76 644 aa11.52□□□□□ -0.57
Lig4-201ENSMUST00000095476 Ercc5P35689 1170 aa11.52□□□□□ -0.57
Lig4-201ENSMUST00000095476 Pla2r1Q62028 1487 aa11.52□□□□□ -0.57
Lig4-201ENSMUST00000095476 Spa17Q62252 149 aa11.52□□□□□ -0.57
Lig4-201ENSMUST00000095476 HhatQ8BMT9 499 aa11.52□□□□□ -0.57
Lig4-201ENSMUST00000095476 Krt25Q8VCW2 446 aa11.52□□□□□ -0.57
Lig4-201ENSMUST00000095476 Mrps25Q9D125 171 aaKnown RBP11.52□□□□□ -0.57
Lig4-201ENSMUST00000095476 Nlrp4fQ66X05 959 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Prpf40bQ80W14 870 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Acnat2Q8BGG9 420 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Tab2Q99K90 693 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Mcur1Q9CXD6 340 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Galntl5Q9D4M9 431 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Kdm5bQ80Y84 1544 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Tbc1d4Q8BYJ6 1307 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Pde5aQ8CG03 865 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Vps41Q5KU39 853 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Tsr1Q5SWD9 803 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Recql4Q75NR7 1216 aaKnown RBP11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Rab44Q8CB87 725 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Cnot6lQ8VEG6 555 aa11.51□□□□□ -0.57
Lig4-201ENSMUST00000095476 Itgb1bp2Q9R000 350 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms