RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Tbc1d9Q3UYK3 1264 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Ccdc42Q5SV66 316 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Tpcn1Q9EQJ0 817 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Stox1B2RQL2 990 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Trim25Q61510 634 aaKnown RBP11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Riox2Q8CD15 465 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 1700006A11RikB9EHI3 544 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Eif3j1Q3UGC7 261 aaKnown RBP11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Eif3j2Q66JS6 263 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 4921530L21RikQ9CQ47 274 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Med10Q9CXU0 135 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Abcc6Q9R1S7 1498 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Lmtk2Q3TYD6 1471 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Sclt1G5E861 688 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 RragbQ6NTA4 374 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Gm18336A0A140LIU8 765 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 U2af1l4Q8BGJ9 220 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Anapc5Q8BTZ4 740 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Mettl24Q8CCB5 363 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Kif17Q99PW8 1038 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Stx6Q9JKK1 255 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Col20a1Q923P0 1320 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Spa17Q62252 149 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Larp6Q8BN59 492 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Ccdc105Q9D4K7 499 aa11.86□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Trpm2Q91YD4 1506 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Pdia4P08003 638 aaKnown RBP11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Ubn1Q4G0F8 1135 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Arhgap10Q6Y5D8 786 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Erlin1Q91X78 346 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Stk25Q9Z2W1 426 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Fam186bD3Z420 943 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 CalrP14211 416 aaKnown RBP11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Stim2P83093 746 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Slc4a7Q8BTY2 1034 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Ubxn2aQ99KJ0 258 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Six6os1Q9CTN5 574 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Cd274Q9EP73 290 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Rasal2E9PW37 1286 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Atp2a2O55143 1044 aaKnown RBP11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 4933409G03RikQ8C5U0 320 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Calml3Q9D6P8 149 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 CenpkQ9ESN5 271 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Zscan29E9Q5B4 869 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Nkx1-1G3UXB3 402 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Tnni3P48787 211 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Gm12185Q5NCB2 835 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Tcp11l1Q8BTG3 509 aa11.85□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Art2aP17981 287 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Ahcyl2Q68FL4 613 aaKnown RBP11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Haus6Q6NV99 933 aaKnown RBP11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Rtn1Q8K0T0 780 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Mtmr3Q8K296 1196 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 MthfslL7N466 203 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Krt18P05784 423 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Thrap3Q569Z6 951 aaKnown RBP11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Gipc1Q9Z0G0 333 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Rad50P70388 1312 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Ttc21aQ8C0S4 1314 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Apol7aB2RT54 418 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Ccdc189Q6NZQ0 333 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Svs3bQ8BZH8 265 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Bcar3Q9QZK2 820 aa11.84□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Klhl34A2AI76 644 aa11.83□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Pcdh10E9PXQ7 1057 aa11.83□□□□□ -0.52
Rtn3-204ENSMUST00000088171 PrimpolQ6P1E7 537 aa11.83□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Hspa1lP16627 641 aa11.83□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Fam170aQ66LM6 333 aa11.83□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ccdc93Q7TQK5 629 aa11.83□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Nup62clA2AG10 272 aa11.83□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Akr1c19G3X9Y6 323 aa11.83□□□□□ -0.52
Rtn3-204ENSMUST00000088171 CebpzP53569 1052 aaKnown RBP11.83□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Nek5Q7TSC3 627 aa11.83□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Cd248Q91V98 765 aa11.83□□□□□ -0.52
Rtn3-204ENSMUST00000088171 SbdsP70122 250 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 IbspQ61711 324 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Cst12Q9DAN8 128 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ddx24Q9ESV0 857 aaKnown RBP11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ccdc185Q3V118 621 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Syne3Q4FZC9 975 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Rab34Q64008 259 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Syce1Q9D495 329 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Nsmce1Q9D720 266 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 PaskQ8CEE6 1383 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Tmod1P49813 359 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 MycbpapQ5SUV2 932 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Morc2aQ69ZX6 1030 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Kiaa1328Q6NZK5 612 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Fgd5Q80UZ0 1219 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Scyl2Q8CFE4 930 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ces1dQ8VCT4 565 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Mast3Q3U214 1321 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Ttll7A4Q9F0 912 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Magea1O89006 320 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Magea5O89009 320 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Lrrc36Q3V0M2 755 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Cdca8Q8BHX3 289 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Rapgef5Q8C0Q9 814 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Paip2Q9D6V8 124 aa11.82□□□□□ -0.52
Rtn3-204ENSMUST00000088171 Magea2Q9R2A2 320 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms