RNA–Protein interactions for RNA: ENSMUST00000067284.9

Cpsf3-201, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf3, Length 2,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-201ENSMUST00000067284 Iqca1Q9CUL5 857 aa11.2□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Npc1l1Q6T3U4 1333 aa11.2□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Vmn2r23E9PXI5 849 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 1700113H08RikE9Q9Q5 327 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 TsksO54887 585 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Fsd1Q7TPM6 496 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Srgap1Q91Z69 1062 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Ssc5dQ8BV57 1371 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Gm29094F6Q785 221 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Limch1Q3UH68 1057 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 MthfsQ9D110 203 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 4930548H24RikQ9D496 437 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Mmel1Q9JLI3 765 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Krt85Q9Z2T6 507 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Atp8b3Q6UQ17 1335 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Myh7Q91Z83 1935 aa11.19□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Mctp1E9PV86 951 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Hmx1O70218 332 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Cops6O88545 324 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 RdxP26043 583 aaKnown RBP11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Tyro3P55144 880 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Csrnp1P59054 583 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Ccdc34Q3UI66 367 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Tmem59lQ7TNI2 337 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Sptlc3Q8BG54 563 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Atad2Q8CDM1 1040 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Arap2Q8BZ05 1703 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Nol10Q5RJG1 687 aaKnown RBP11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Bicd2Q921C5 820 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Tbc1d7Q9D0K0 293 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 PdcQ9QW08 244 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Greb1lB9EJV3 1913 aa11.18□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Bin2D3Z6Q9 489 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Lrriq3Q14DL3 633 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Acap3Q6NXL5 833 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Atp1a3Q6PIC6 1013 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 CrebrfQ8CDG5 640 aaKnown RBP11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Pcdhb15Q91Y04 786 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 TnmdQ9EP64 317 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Pes1Q9EQ61 584 aaKnown RBP11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Wdr33Q8K4P0 1330 aaKnown RBP11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Cspp1B2RX88 1205 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 CebpaP53566 359 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Sparcl1P70663 650 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Kcnf1Q7TSH7 493 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Trim59Q922Y2 403 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Ankrd31A0A140LI88 1765 aa11.17□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Mast2Q60592 1734 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Nxf2Q4ZGD8 691 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Fam170aQ66LM6 333 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Ccdc82Q6PG04 518 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 CerkQ8K4Q7 531 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 BrapQ99MP8 591 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Mrpl44Q9CY73 333 aaKnown RBP11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Sik3Q6P4S6 1311 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Kcnh4A2A5F7 1018 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Kif3cO35066 796 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Prdm1Q60636 856 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Cyp7a1Q64505 503 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Tubb6Q922F4 447 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 CenpqQ9CPQ5 267 aa11.16□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Zkscan7E9PVW1 718 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Plcb3P51432 1234 aaKnown RBP11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Pald1P70261 859 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Zbtb38Q3LR78 1197 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Nlrp9aQ66X03 949 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Lmod1Q8BVA4 595 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Rufy2Q8R4C2 606 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Col3a1P08121 1464 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Sik1Q60670 779 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Nlrp3Q8R4B8 1033 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Nrbp1Q99J45 535 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Ppil4Q9CXG3 492 aaKnown RBP11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Sil1Q9EPK6 465 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Foxo4Q9WVH3 505 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Myh2G3UW82 1942 aa11.15□□□□□ -0.62
Cpsf3-201ENSMUST00000067284 Pramel3A2AHA7 463 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Gm7903A2AWL1 463 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 AV320801A2AWL3 467 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 TrdnE9Q9K5 693 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Gm15023L7MUB4 467 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 VeztQ3ZK22 780 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Itga6Q61739 1091 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Oxsr1Q6P9R2 527 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Zfp397Q7TNK4 527 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Ncaph2Q8BSP2 607 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Terf2ipQ91VL8 393 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Rbm33Q9CXK9 1231 aaKnown RBP11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Appbp2Q9DAX9 585 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Atp8a2P98200 1148 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Ccdc162pQ0VG85 912 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Ice2Q3UZ18 988 aaKnown RBP11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Gnl3lQ6PGG6 577 aaKnown RBP11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Miga2Q8BK03 593 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Snw1Q9CSN1 536 aaKnown RBP11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Popdc2Q9ES82 367 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Sh3bgrQ9WUZ7 214 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Tbc1d8Q9Z1A9 1134 aa11.14□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 CebpzP53569 1052 aaKnown RBP11.13□□□□□ -0.63
Cpsf3-201ENSMUST00000067284 Llgl2Q3TJ91 1027 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms