RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Smim5Q8BT42 78 aa20.9■□□□□ 0.94
Scaf11-201ENSMUST00000047835 Sestd1Q80UK0 696 aa20.9■□□□□ 0.94
Scaf11-201ENSMUST00000047835 CebpzP53569 1052 aaKnown RBP20.89■□□□□ 0.94
Scaf11-201ENSMUST00000047835 Prpf40aQ9R1C7 953 aaKnown RBP20.89■□□□□ 0.94
Scaf11-201ENSMUST00000047835 AceP09470 1312 aa20.89■□□□□ 0.94
Scaf11-201ENSMUST00000047835 NcapgE9PWG6 1004 aa20.89■□□□□ 0.94
Scaf11-201ENSMUST00000047835 Cyp24a1Q64441 514 aa20.89■□□□□ 0.94
Scaf11-201ENSMUST00000047835 Ano10Q8BH79 659 aa20.89■□□□□ 0.94
Scaf11-201ENSMUST00000047835 Znf219Q6IQX8 726 aa20.89■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Zmynd15Q8C0R7 736 aa20.89■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Atg3Q9CPX6 314 aa20.89■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Snw1Q9CSN1 536 aaKnown RBP20.89■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Znf394Q9Z1D9 521 aa20.89■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Appbp2Q9DAX9 585 aa20.89■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Snapc4Q8BP86 1333 aa20.89■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Fhod3Q76LL6 1578 aa20.89■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Lrrc59Q922Q8 307 aaKnown RBP20.89■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Atp10aO54827 1508 aa20.88■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Tm6sf1P58749 370 aa20.88■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Ctnna2Q61301 953 aa20.88■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Uggt2E9Q4X2 1504 aa20.88■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Gm4758L7N258 96 aa20.88■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Luc7l2Q7TNC4 392 aaKnown RBP20.88■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Gna11P21278 359 aa20.88■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Hspa4Q61316 841 aa20.88■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Cnksr1A2A9K7 700 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Wdr70Q3TWF6 657 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Bst2Q8R2Q8 172 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 1700018F24RikB2RW27 314 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Kif5bQ61768 963 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Dcaf5Q80T85 946 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 SnrkQ8VDU5 748 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Ndufa8Q9DCJ5 172 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Zfp42P22227 288 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Sap30bpQ02614 308 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Kif1bQ60575 1816 aaKnown RBP20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Hdac6Q9Z2V5 1149 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Trpm2Q91YD4 1506 aa20.87■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Csrnp1P59054 583 aa20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Atp8a2P98200 1148 aa20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Krt15Q61414 452 aa20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Gng11P61953 73 aa20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Ncaph2Q8BSP2 607 aa20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Kiaa1524Q8BWY9 907 aa20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Def6Q8C2K1 630 aa20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Ncoa5Q91W39 579 aaKnown RBP20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Sycp2lA0A0M3U1B0 842 aa20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Gbp4Q61107 620 aa20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Ccdc105Q9D4K7 499 aa20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Exoc3Q6KAR6 755 aa20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 HmcesQ8R1M0 353 aaKnown RBP20.86■□□□□ 0.93
Scaf11-201ENSMUST00000047835 VrtnQ3SYK4 740 aa20.85■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Pex1Q5BL07 1284 aa20.85■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Tyro3P55144 880 aa20.85■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Tlr7P58681 1050 aa20.85■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Ccdc12Q8R344 166 aaKnown RBP20.85■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Fam186bD3Z420 943 aa20.85■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Prune1Q8BIW1 454 aa20.85■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Prdm11A2AGX3 565 aa20.85■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Chd1lQ9CXF7 900 aa20.85■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Nsrp1Q5NCR9 542 aa20.85■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Tex14Q7M6U3 1450 aa20.85■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Map3k4O08648 1597 aa20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 MthfslL7N466 203 aa20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Prkg1P0C605 671 aa20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Tom1l2Q5SRX1 507 aa20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 SdsQ8VBT2 327 aa20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Pcdhb22Q91XZ8 794 aa20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 PigbQ9JJQ0 542 aa20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Ppp6r3Q922D4 844 aa20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Erbb3Q61526 1339 aa20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Parp1P11103 1013 aaKnown RBP20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Utp18Q5SSI6 552 aaKnown RBP20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Haus6Q6NV99 933 aaKnown RBP20.84■□□□□ 0.93
Scaf11-201ENSMUST00000047835 NpcdF8VQB8 469 aa20.83■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Zbtb38Q3LR78 1197 aa20.83■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Zcrb1Q9CZ96 217 aaKnown RBP20.83■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Ccdc93Q7TQK5 629 aa20.83■□□□□ 0.93
Scaf11-201ENSMUST00000047835 AdpgkQ8VDL4 496 aa20.83■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Arhgef6Q8K4I3 771 aa20.83■□□□□ 0.93
Scaf11-201ENSMUST00000047835 Epb41l2O70318 988 aaKnown RBP20.83■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Ftl2P49945 183 aa20.83■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Tax1bp1Q3UKC1 814 aaKnown RBP20.83■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Ncoa4Q5U4H9 625 aa20.83■□□□□ 0.92
Scaf11-201ENSMUST00000047835 InhbeO08717 350 aa20.83■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Cep135Q6P5D4 1140 aa20.83■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Abcc4E9Q236 1325 aa20.82■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Morc2aQ69ZX6 1030 aa20.82■□□□□ 0.92
Scaf11-201ENSMUST00000047835 NapaQ9DB05 295 aa20.82■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Kdm6bQ5NCY0 1641 aa20.82■□□□□ 0.92
Scaf11-201ENSMUST00000047835 RgmbQ7TQ33 436 aa20.82■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Serpinc1P32261 465 aa20.82■□□□□ 0.92
Scaf11-201ENSMUST00000047835 4930504O13RikQ8C5Z9 145 aa20.82■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Vps18Q8R307 973 aa20.82■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Hook3Q8BUK6 718 aa20.82■□□□□ 0.92
Scaf11-201ENSMUST00000047835 InsrrQ9WTL4 1300 aa20.81■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Lrrc36Q3V0M2 755 aa20.81■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Usp33Q8R5K2 909 aa20.81■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Cep170Q6A065 1588 aa20.81■□□□□ 0.92
Scaf11-201ENSMUST00000047835 Ppp1r9aH3BJD6 1292 aa20.81■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms