RNA–Protein interactions for RNA: ENSMUST00000025649.8

Ddb1-201, Transcript of DNA damage-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddb1, Length 4,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1-201ENSMUST00000025649 Ktn1Q61595 1327 aaKnown RBP8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 GakQ99KY4 1305 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Pa2g4P50580 394 aaKnown RBP8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Clcn1Q64347 994 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Cep120Q7TSG1 988 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Spef2Q8C9J3 1734 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 DymQ8CHY3 669 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Otud6bQ8K2H2 294 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Arhgap33Q80YF9 1305 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Prl3d3A0A0M6L0J6 224 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Fbf1A2A870 1173 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Calm1P0DP26 149 aaKnown RBP8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Calm2P0DP27 149 aaKnown RBP8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Calm3P0DP28 149 aaKnown RBP8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 SympkQ80X82 1284 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Lmod1Q8BVA4 595 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Afg3l2Q8JZQ2 802 aaKnown RBP8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Calml4Q91WQ9 153 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Atg3Q9CPX6 314 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Uchl5Q9WUP7 329 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Irs4Q9Z0Y7 1216 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Mdc1Q5PSV9 1707 aa8.67□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Zkscan7E9PVW1 718 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Kcnj4P52189 445 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Ube2hP62257 183 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Cypt2Q6P924 180 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Jade2Q6ZQF7 829 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Cdca8Q8BHX3 289 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Nek11Q8C0Q4 628 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Arhgef6Q8K4I3 771 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Plekhg2Q6KAU7 1340 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Marf1Q8BJ34 1730 aaKnown RBP8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 A0A1W2P7S8 802 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 4930523C07RikE9Q2T4 99 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Nfxl1E9Q8I7 918 aaKnown RBP8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 P4ha1Q60715 534 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Cdc5lQ6A068 802 aaKnown RBP8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Tekt3Q6X6Z7 490 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Svs3aF2Z472 265 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Dapk3O54784 448 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Ier5O89113 308 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Mcm4P49717 862 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Gm12185Q5NCB2 835 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Ufl1Q8CCJ3 793 aaKnown RBP8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Vps16Q920Q4 839 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 CenppQ9CZ92 286 aa8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Pdcd6ipQ9WU78 869 aaKnown RBP8.66□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Ccdc112A0AUP1 442 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Mrps27Q8BK72 415 aaKnown RBP8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Myl6bQ8CI43 207 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Ccar2Q8VDP4 922 aaKnown RBP8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Srgap1Q91Z69 1062 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Sil1Q9EPK6 465 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Zbtb22Q9Z0G7 638 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Col1a2Q01149 1372 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Duxf3A0A0N4SV92 674 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Bin1O08539 588 aaKnown RBP8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Stx1aO35526 288 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Zfp42P22227 288 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Olfm5Q8BU90 496 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Ptcd1Q8C2E4 695 aaKnown RBP8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Def6Q8C2K1 630 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 ParnQ8VDG3 624 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Casp1P29452 402 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Iqsec3Q3TES0 1195 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Larp6Q8BN59 492 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Tceanc2Q8R2M0 207 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Znf541Q0GGX2 1363 aa8.65□□□□□ -1.02
Ddb1-201ENSMUST00000025649 Nhsl1Q8CAF4 1587 aa8.65□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Prdm11A2AGX3 565 aa8.65□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Pdia3P27773 505 aaKnown RBP8.65□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Ssrp1Q08943 708 aaKnown RBP8.65□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Trim25Q61510 634 aaKnown RBP8.65□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Kiaa0319lQ8K135 1048 aa8.65□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Lman1Q9D0F3 517 aa8.65□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Clip2Q9Z0H8 1047 aa8.65□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Atp8b3Q6UQ17 1335 aa8.65□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Zscan29E9Q5B4 869 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Eya2O08575 532 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Atf5O70191 283 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Nkx2-3P97334 362 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Kiaa1211Q5PR69 1207 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Morc2aQ69ZX6 1030 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Slx4ipQ9D7Y9 413 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Shank2Q80Z38 1476 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Syde2E9PUP1 1314 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Igsf1Q7TQA1 1317 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Brd1E9PZ26 1189 aaKnown RBP8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Terf2O35144 541 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 DesP31001 469 aaKnown RBP8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Ppfia3P60469 1194 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Vars2Q3U2A8 1060 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Pla2g4fQ50L41 855 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Smarcc2Q6PDG5 1213 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Ppp1r10Q80W00 888 aaKnown RBP8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Cyp2d12Q8BVD2 504 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Fermt2Q8CIB5 680 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Ctage5Q8R311 779 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Pik3ap1Q9EQ32 811 aa8.64□□□□□ -1.03
Ddb1-201ENSMUST00000025649 Hs6st3Q9QYK4 470 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms