RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 TsksO54887 585 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Ftl2P49945 183 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Gng11P61953 73 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Magi2Q9WVQ1 1275 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Rreb1Q3UH06 1700 aaKnown RBP13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Lekr1B2RVN1 116 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Bin2D3Z6Q9 489 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Sdc2P43407 202 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Pfkfb1P70266 471 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Tmco3Q8BH01 678 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Rdm1Q9CQK3 281 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Abcc10Q8R4P9 1501 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Ell2Q3UKU1 639 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Nlrp9aQ66X03 949 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Klhl30Q8C3F7 581 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Sept12Q9D451 317 aa13.23□□□□□ -0.29
Herc4-201ENSMUST00000020258 Cyp26a1O55127 497 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Cops6O88545 324 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Gpr182P43142 395 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Slf2Q6P9P0 1278 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Ctdspl2Q8BG15 465 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Baiap2l1Q9DBJ3 514 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Tfcp2Q9ERA0 502 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Ltb4r2Q9JJL9 360 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Nwd1A6H603 1563 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Usp42B2RQC2 1324 aaKnown RBP13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Secisbp2lQ6A098 1086 aaKnown RBP13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Tpcn2Q8BWC0 731 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Nup133Q8R0G9 1155 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Col15a1O35206 1367 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Calcoco2A2A6M5 331 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Hmx1O70218 332 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Rrp1P56183 494 aaKnown RBP13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 ItpripQ3TNL8 555 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Miga2Q8BK03 593 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Ttc27Q8CD92 847 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Ccdc39Q9D5Y1 937 aa13.22□□□□□ -0.29
Herc4-201ENSMUST00000020258 Pramel3A2AHA7 463 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 Gm7903A2AWL1 463 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 AV320801A2AWL3 467 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 TrdnE9Q9K5 693 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 Gm15023L7MUB4 467 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 XpcP51612 930 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 Usp44Q8C2S0 711 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 Trim34aQ99PP6 485 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 Desi2Q9D291 194 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 Rapgef4Q9EQZ6 1011 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 Kcnb2A6H8H5 907 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 Slc4a4O88343 1079 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 Kiaa0753Q6A000 959 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 Alg3Q8K2A8 438 aa13.21□□□□□ -0.29
Herc4-201ENSMUST00000020258 Ift172Q6VH22 1749 aa13.21□□□□□ -0.3
Herc4-201ENSMUST00000020258 Card10P58660 1021 aa13.21□□□□□ -0.3
Herc4-201ENSMUST00000020258 Sun3Q5SS91 320 aa13.21□□□□□ -0.3
Herc4-201ENSMUST00000020258 Q66JV7 365 aa13.21□□□□□ -0.3
Herc4-201ENSMUST00000020258 Wdr3Q8BHB4 942 aaKnown RBP13.21□□□□□ -0.3
Herc4-201ENSMUST00000020258 Dnaaf2Q8BPI1 814 aa13.21□□□□□ -0.3
Herc4-201ENSMUST00000020258 Lrrc59Q922Q8 307 aaKnown RBP13.21□□□□□ -0.3
Herc4-201ENSMUST00000020258 NgdnQ9DB96 315 aaKnown RBP13.21□□□□□ -0.3
Herc4-201ENSMUST00000020258 Mapk8ip1Q9WVI9 707 aa13.21□□□□□ -0.3
Herc4-201ENSMUST00000020258 Zscan20B2KFW1 1030 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Cyp2d34L7N463 504 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Polr2dQ9D7M8 142 aaKnown RBP13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Znf704Q9ERQ3 566 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Large1Q9Z1M7 756 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Rsph10bE9PYQ0 876 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Prl3d2F6R3P9 224 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Slc1a4O35874 532 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Stx8O88983 236 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 LtkP08923 888 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Cdkl5Q3UTQ8 938 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Abtb2Q7TQI7 1024 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Mei4Q8BRM6 389 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ncaph2Q8BSP2 607 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Wdr64Q9D565 1086 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Appbp2Q9DAX9 585 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Tmem2Q5FWI3 1383 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 TnrQ8BYI9 1358 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Nlrp1aQ2LKU9 1182 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Atg9aQ68FE2 551 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Arl8aQ8VEH3 186 aa13.2□□□□□ -0.3
Herc4-201ENSMUST00000020258 Slc4a1P04919 929 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Fam160b2Q80YR2 744 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ttc12Q8BW49 704 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Dnaaf4Q8R368 420 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Trim11Q99PQ2 467 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 4930548H24RikQ9D496 437 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Cyp2j7A0A140T8U1 504 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Actn3O88990 900 aaKnown RBP13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Kcnj4P52189 445 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 C87499Q3UX49 493 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Gm12185Q5NCB2 835 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Asap2Q7SIG6 958 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Spag5Q7TME2 1165 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Cdca8Q8BHX3 289 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Ufl1Q8CCJ3 793 aaKnown RBP13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Atad2Q8CDM1 1040 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Suclg2Q9Z2I8 433 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 Irx2P81066 474 aa13.19□□□□□ -0.3
Herc4-201ENSMUST00000020258 IcoslgQ9JHJ8 322 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms