RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Maats1Q8BRC6 783 aa11.92□□□□□ -0.5
Clip3-201ENSMUST00000014065 Ncoa5Q91W39 579 aaKnown RBP11.92□□□□□ -0.5
Clip3-201ENSMUST00000014065 Tmem132aQ922P8 1018 aa11.92□□□□□ -0.5
Clip3-201ENSMUST00000014065 Mei1Q9D4I2 1268 aa11.92□□□□□ -0.5
Clip3-201ENSMUST00000014065 Lcmt1A0A0U1RNF2 332 aa11.92□□□□□ -0.5
Clip3-201ENSMUST00000014065 GmnnO88513 206 aa11.92□□□□□ -0.5
Clip3-201ENSMUST00000014065 Asic4Q7TNS7 539 aa11.92□□□□□ -0.5
Clip3-201ENSMUST00000014065 Cnot6lQ8VEG6 555 aa11.92□□□□□ -0.5
Clip3-201ENSMUST00000014065 Atp10bB1AWN4 1474 aa11.92□□□□□ -0.5
Clip3-201ENSMUST00000014065 Syde2E9PUP1 1314 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Ms4a1P19437 291 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Mkrn3Q60764 544 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Igsf3Q6ZQA6 1194 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Slc5a1Q8C3K6 665 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Flad1Q8R123 492 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Tet3Q8BG87 1668 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Col16a1Q8BLX7 1580 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 NfkbibQ60778 359 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Itga6Q61739 1091 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Ncaph2Q8BSP2 607 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Atad2Q8CDM1 1040 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Fam76aQ922G2 307 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Cwc25Q9DBF7 416 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Arap3Q8R5G7 1538 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Slit3Q9WVB4 1523 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Exosc10P56960 887 aaKnown RBP11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Ncoa4Q5U4H9 625 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Tmco3Q8BH01 678 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Klhl30Q8C3F7 581 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 Naa16Q9DBB4 864 aa11.91□□□□□ -0.5
Clip3-201ENSMUST00000014065 N4bp2F8VQG7 1678 aaKnown RBP11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Gm21680A0A0G2JGR8 267 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Metap2O08663 478 aaKnown RBP11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Psmb7P70195 277 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Cplx2P84086 134 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Ppp4r3aQ6P2K6 820 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Trak2Q6P9N8 913 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Lmod1Q8BVA4 595 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 GptQ8QZR5 496 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Desi2Q9D291 194 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Ktn1Q61595 1327 aaKnown RBP11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Map7d2A2AG50 781 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Dapk3O54784 448 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Necab1Q8BG18 352 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Zmynd15Q8C0R7 736 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Trim59Q922Y2 403 aa11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 Gtpbp4Q99ME9 634 aaKnown RBP11.9□□□□□ -0.5
Clip3-201ENSMUST00000014065 CrklP47941 303 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Vps16Q920Q4 839 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Tpm4Q6IRU2 248 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Zbtb40Q6PCS8 1258 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Etf1Q8BWY3 437 aaKnown RBP11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Acsbg1Q99PU5 721 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Eya2O08575 532 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Rtel1Q0VGM9 1203 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Gm28047Q3US59 414 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Zswim4Q8C7B8 1101 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Bcl11bQ99PV8 884 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Arfgef2A2A5R2 1792 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Wdr17E9Q271 1322 aa11.89□□□□□ -0.51
Clip3-201ENSMUST00000014065 Nlrp1aQ2LKU9 1182 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 GphnQ8BUV3 769 aaKnown RBP11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Tpcn2Q8BWC0 731 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Ankrd1Q9CR42 319 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 NalcnQ8BXR5 1738 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Gm43638A0A0J9YU36 694 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Kif2aP28740 705 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Ttll12Q3UDE2 639 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Agtpbp1Q641K1 1218 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Atg9aQ68FE2 551 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Acap3Q6NXL5 833 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 ImmtQ8CAQ8 757 aaKnown RBP11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Ints4Q8CIM8 964 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Rdm1Q9CQK3 281 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Grin2dQ03391 1323 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Btn2a2A4QPC6 514 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Ugt1a6bK9J7B2 531 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Kmt5bQ3U8K7 883 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Ugt1a6Q64435 531 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Abcf1Q6P542 837 aaKnown RBP11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Ugt1a7cQ6ZQM8 531 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 MbipQ99LQ1 341 aa11.88□□□□□ -0.51
Clip3-201ENSMUST00000014065 Tpm3-rs7D3Z2H9 248 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Cyp26a1O55127 497 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Abl1P00520 1123 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Atp1a2Q6PIE5 1020 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Tmem266Q8BZB3 538 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Nup153E9Q3G8 1462 aaKnown RBP11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Gm3409A0A0G2JE67 319 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Ovgp1Q62010 721 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Krt39Q6IFX4 482 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Ctdspl2Q8BG15 465 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Ccdc12Q8R344 166 aaKnown RBP11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Tubgcp2Q921G8 905 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Zbtb43Q9DAI4 467 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 SelenooQ9DBC0 667 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Baiap2l1Q9DBJ3 514 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Ptpn23Q6PB44 1692 aa11.87□□□□□ -0.51
Clip3-201ENSMUST00000014065 Ces1hD3Z298 562 aa11.86□□□□□ -0.51
Clip3-201ENSMUST00000014065 CrcpO35427 148 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms