RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Mei1Q9D4I2 1268 aa13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 Stk38Q91VJ4 465 aa13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 Pde3aQ9Z0X4 1141 aa13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 Pcdh10E9PXQ7 1057 aa13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 Gpr182P43142 395 aa13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 Fam170aQ66LM6 333 aa13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 Cep135Q6P5D4 1140 aa13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 Lrrc2Q8VDB8 371 aa13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 Emilin1Q99K41 1017 aa13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 Mrps25Q9D125 171 aaKnown RBP13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 Naa16Q9DBB4 864 aa13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 Ehd4Q9EQP2 541 aa13.22□□□□□ -0.29
Vps54-201ENSMUST00000006221 TsksO54887 585 aa13.21□□□□□ -0.29
Vps54-201ENSMUST00000006221 Ftl2P49945 183 aa13.21□□□□□ -0.29
Vps54-201ENSMUST00000006221 Llgl2Q3TJ91 1027 aa13.21□□□□□ -0.29
Vps54-201ENSMUST00000006221 Zkscan8Q8BSL0 588 aa13.21□□□□□ -0.29
Vps54-201ENSMUST00000006221 Cep55Q8BT07 462 aa13.21□□□□□ -0.29
Vps54-201ENSMUST00000006221 Sil1Q9EPK6 465 aa13.21□□□□□ -0.29
Vps54-201ENSMUST00000006221 Wnk3Q80XP9 1757 aa13.21□□□□□ -0.29
Vps54-201ENSMUST00000006221 Sik3Q6P4S6 1311 aa13.21□□□□□ -0.29
Vps54-201ENSMUST00000006221 Cyp19a1P28649 503 aa13.21□□□□□ -0.3
Vps54-201ENSMUST00000006221 Ciao1Q99KN2 339 aa13.21□□□□□ -0.3
Vps54-201ENSMUST00000006221 Xpo4Q9ESJ0 1151 aa13.21□□□□□ -0.3
Vps54-201ENSMUST00000006221 Large1Q9Z1M7 756 aa13.21□□□□□ -0.3
Vps54-201ENSMUST00000006221 Sall1Q9ER74 1322 aa13.21□□□□□ -0.3
Vps54-201ENSMUST00000006221 Abca3Q8R420 1704 aa13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Acnat2Q8BGG9 420 aa13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Luzp1Q8R4U7 1068 aaKnown RBP13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Sptlc2P97363 560 aaKnown RBP13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Mrc1Q61830 1456 aa13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Prkag3Q8BGM7 489 aa13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Kiaa1524Q8BWY9 907 aa13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Adam1bQ8R534 806 aa13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Myl10Q62082 202 aa13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Kiaa0753Q6A000 959 aa13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Clca2Q8BG22 942 aa13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Zfp202Q8C879 641 aa13.2□□□□□ -0.3
Vps54-201ENSMUST00000006221 Zfp397Q7TNK4 527 aa13.19□□□□□ -0.3
Vps54-201ENSMUST00000006221 Cnot6lQ8VEG6 555 aa13.19□□□□□ -0.3
Vps54-201ENSMUST00000006221 Lipo1J3QME6 396 aa13.19□□□□□ -0.3
Vps54-201ENSMUST00000006221 Gm12185Q5NCB2 835 aa13.19□□□□□ -0.3
Vps54-201ENSMUST00000006221 Fsd2Q8BZ52 692 aa13.19□□□□□ -0.3
Vps54-201ENSMUST00000006221 Appbp2Q9DAX9 585 aa13.19□□□□□ -0.3
Vps54-201ENSMUST00000006221 Tiam2Q6ZPF3 1715 aa13.19□□□□□ -0.3
Vps54-201ENSMUST00000006221 Carmil3Q3UFQ8 1375 aa13.19□□□□□ -0.3
Vps54-201ENSMUST00000006221 Anks1aP59672 1150 aa13.19□□□□□ -0.3
Vps54-201ENSMUST00000006221 L1td1Q587J6 782 aaKnown RBP13.19□□□□□ -0.3
Vps54-201ENSMUST00000006221 Tpcn2Q8BWC0 731 aa13.19□□□□□ -0.3
Vps54-201ENSMUST00000006221 Ccng2O08918 344 aa13.18□□□□□ -0.3
Vps54-201ENSMUST00000006221 Pfkfb1P70266 471 aa13.18□□□□□ -0.3
Vps54-201ENSMUST00000006221 DymQ8CHY3 669 aa13.18□□□□□ -0.3
Vps54-201ENSMUST00000006221 Znf568E9PYI1 671 aa13.18□□□□□ -0.3
Vps54-201ENSMUST00000006221 Surf1P09925 306 aa13.18□□□□□ -0.3
Vps54-201ENSMUST00000006221 Ccnl1Q52KE7 532 aaKnown RBP13.18□□□□□ -0.3
Vps54-201ENSMUST00000006221 Gigyf1Q99MR1 1044 aaKnown RBP13.18□□□□□ -0.3
Vps54-201ENSMUST00000006221 Ubap1lG3UW59 384 aa13.18□□□□□ -0.3
Vps54-201ENSMUST00000006221 Cyp26a1O55127 497 aa13.18□□□□□ -0.3
Vps54-201ENSMUST00000006221 Telo2Q9DC40 840 aaKnown RBP13.18□□□□□ -0.3
Vps54-201ENSMUST00000006221 Acot9Q9R0X4 439 aaKnown RBP13.18□□□□□ -0.3
Vps54-201ENSMUST00000006221 Plekhd1B2RPU2 505 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Gm20425E9Q035 978 aaKnown RBP13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 SrprbP47758 269 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Nol10Q5RJG1 687 aaKnown RBP13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Gm43638A0A0J9YU36 694 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Dnajc25A2ALW5 357 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Sptlc3Q8BG54 563 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Nop2Q922K7 793 aaKnown RBP13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Dync1i1O88485 628 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Zeb2Q9R0G7 1215 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Cdc45Q9Z1X9 566 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Col3a1P08121 1464 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Samsn1P57725 372 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Gas2l3Q3UWW6 683 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 AbraQ8BUZ1 375 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Lmod1Q8BVA4 595 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Stxbp4Q9WV89 557 aa13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Tnrc6cQ3UHC0 1690 aaKnown RBP13.17□□□□□ -0.3
Vps54-201ENSMUST00000006221 Col18a1P39061 1774 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Ints4Q8CIM8 964 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Ppil4Q9CXG3 492 aaKnown RBP13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Vnn1Q9Z0K8 512 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Grin2dQ03391 1323 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Pcdhb9E9Q5G2 828 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 LtkP08923 888 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Epha2Q03145 977 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Gm28047Q3US59 414 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Nlrp9aQ66X03 949 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Elf2Q9JHC9 593 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Dnm1P39053 867 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Tnnt2P50752 301 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Smg7Q5RJH6 1138 aaKnown RBP13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Frat2Q8K025 231 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Yeats4Q9CR11 227 aaKnown RBP13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 Magi2Q9WVQ1 1275 aa13.16□□□□□ -0.3
Vps54-201ENSMUST00000006221 CoblQ5NBX1 1337 aaKnown RBP13.15□□□□□ -0.3
Vps54-201ENSMUST00000006221 Dnm3Q8BZ98 863 aa13.15□□□□□ -0.3
Vps54-201ENSMUST00000006221 MbipQ99LQ1 341 aa13.15□□□□□ -0.3
Vps54-201ENSMUST00000006221 Ddx27Q921N6 760 aaKnown RBP13.15□□□□□ -0.3
Vps54-201ENSMUST00000006221 Slc1a4O35874 532 aa13.15□□□□□ -0.3
Vps54-201ENSMUST00000006221 Usp13Q5BKP2 858 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms