RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ABCA4P78363 2273 aa11.06□□□□□ -0.64
PHGDH-221ENST00000641573 TRAV6A0A075B6T7 132 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 hCG_1807616A0A1W2PRN6 198 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 DEFB108AA8MXU0 73 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 INMT-MINDY4F8WBC2 141 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 DEGS1O15121 323 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 TPD52L2O43399 206 aaKnown RBP11.05□□□□□ -0.64
PHGDH-221ENST00000641573 PLAUP00749 431 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 AMY2BP19961 511 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 TBPP20226 339 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 TNFSF4P23510 183 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 SERPINF1P36955 418 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 PRRC2AP48634 2157 aaKnown RBP11.05□□□□□ -0.64
PHGDH-221ENST00000641573 TNFAIP6P98066 277 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-221ENST00000641573 MEF2DQ14814 521 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 Q6P435 159 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 FIP1L1Q6UN15 594 aaKnown RBP11.05□□□□□ -0.64
PHGDH-221ENST00000641573 BTN2A1Q7KYR7 527 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 MOGAT3Q86VF5 341 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 OR10Z1Q8NGY1 313 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 OR4K15Q8NH41 348 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 OR56B4Q8NH76 319 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 LRRC29Q8WV35 223 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 SNAPC3Q92966 411 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 PIK3IP1Q96FE7 263 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 IFT22Q9H7X7 185 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 FN3KRPQ9HA64 309 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 SPACA1Q9HBV2 294 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 ZNF230Q9UIE0 474 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-221ENST00000641573 EDARQ9UNE0 448 aa11.05□□□□□ -0.64
PHGDH-221ENST00000641573 DISC1C4P0D8 188 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 MCRIP1C9JLW8 97 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 WNT9BO14905 357 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 PMP2P02689 132 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 AMY2AP04746 511 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 H2AFB2P0C5Z0 115 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 ZNF735P0CB33 412 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 GLRA1P23415 457 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 DTYMKP23919 212 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 LOXP28300 417 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-221ENST00000641573 APOBEC3AP31941 199 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-221ENST00000641573 BTG1P62324 171 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 ACTBL2Q562R1 376 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 RNASE10Q5GAN6 216 aaKnown RBP11.04□□□□□ -0.64
PHGDH-221ENST00000641573 SPIN3Q5JUX0 258 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 ACP7Q6ZNF0 438 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 CADM3Q8N126 398 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 BPIFB2Q8N4F0 458 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 SUMF2Q8NBJ7 301 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 BEST4Q8NFU0 473 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 OR51S1Q8NGJ8 323 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 MAFIPQ8WZ33 124 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 DIRC2Q96SL1 478 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 CHST6Q9GZX3 395 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 WDR13Q9H1Z4 485 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 NUDT15Q9NV35 164 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 ZNF701Q9NV72 531 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-221ENST00000641573 IL19Q9UHD0 177 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 PLEKHA6Q9Y2H5 1048 aa11.04□□□□□ -0.64
PHGDH-221ENST00000641573 NSD1Q96L73 2696 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-221ENST00000641573 TRAV24A0A0B4J272 114 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 C17orf100A8MU93 164 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 M0R233 179 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 SIRPB1O00241 398 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 HS3ST1O14792 307 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 SH2D1BO14796 132 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 PFDN1O60925 122 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 NDUFB6O95139 128 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 CSN2P05814 226 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 GLAP06280 429 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 ADH4P08319 380 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 ZNF44P15621 663 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 HRH1P35367 487 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 GATA4P43694 442 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 RAB25P57735 213 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 ZNF146Q15072 292 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 EFNB3Q15768 340 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 MICBQ29980 383 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 OR5H2Q8NGV7 314 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 LILRB1Q8NHL6 650 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-221ENST00000641573 NEK7Q8TDX7 302 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 RDH5Q92781 318 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 SLC6A7Q99884 636 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 DHRS9Q9BPW9 319 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 TMEM204Q9BSN7 226 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 DPCDQ9BVM2 203 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-221ENST00000641573 C20orf85Q9H1P6 137 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 CHMP1AQ9HD42 196 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-221ENST00000641573 C12orf4Q9NQ89 552 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 DLL4Q9NR61 685 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 RASL12Q9NYN1 266 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 CISD1Q9NZ45 108 aaKnown RBP11.03□□□□□ -0.64
PHGDH-221ENST00000641573 GLS2Q9UI32 602 aa11.03□□□□□ -0.64
PHGDH-221ENST00000641573 JMJD1CQ15652 2540 aa11.02□□□□□ -0.64
PHGDH-221ENST00000641573 IGKV1D-8A0A087WSZ0 117 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 A0A0B4J293 547 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 B9A039 149 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 HSPB6O14558 160 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 OR2H2O95918 312 aa11.02□□□□□ -0.65
PHGDH-221ENST00000641573 HAND1O96004 215 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms