RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TOR1AO14656 332 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 CHST1O43916 411 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 LIMS3P0CW19 117 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 LIMS4P0CW20 117 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 VSIG10L2P0DP72 767 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 PTGFRP43088 359 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 SOX2P48431 317 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 PPP3R1P63098 170 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 RSU1Q15404 277 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 HEPN1Q6WQI6 88 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 ABHD12Q8N2K0 398 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 KLHDC1Q8N7A1 406 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 PXT1Q8NFP0 134 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 TNFAIP8L1Q8WVP5 186 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 CORO2AQ92828 525 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 CREB3L1Q96BA8 519 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 NR1H4Q96RI1 486 aaPredicted RBP15.31■□□□□ 0.04
CLN6-221ENST00000637494 ZNF649Q9BS31 505 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 PRSS22Q9GZN4 317 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 FAM192AQ9GZU8 254 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 ING3Q9NXR8 418 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 OR6C3Q9NZP0 311 aa15.31■□□□□ 0.04
CLN6-221ENST00000637494 EXOSC1Q9Y3B2 195 aaKnown RBP15.31■□□□□ 0.04
CLN6-221ENST00000637494 ODAMA1E959 279 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 A6NDX4 124 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 SLC33A1O00400 549 aaPredicted RBP15.3■□□□□ 0.04
CLN6-221ENST00000637494 WBP4O75554 376 aaKnown RBP15.3■□□□□ 0.04
CLN6-221ENST00000637494 CDK2P24941 298 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 BRS3P32247 399 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 CEACAM3P40198 252 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 GLIPR1P48060 266 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 GTF2A1P52655 376 aaPredicted RBP15.3■□□□□ 0.04
CLN6-221ENST00000637494 ZP1P60852 638 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 CDK5R1Q15078 307 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 SMN1Q16637 294 aaKnown RBP15.3■□□□□ 0.04
CLN6-221ENST00000637494 LRRC36Q1X8D7 754 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 PRAMEF5Q5TYX0 476 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 RNF144BQ7Z419 303 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 TMEM219Q86XT9 240 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 PACRGLQ8N7B6 248 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 FAM110DQ8TAY7 271 aaPredicted RBP15.3■□□□□ 0.04
CLN6-221ENST00000637494 CAPSLQ8WWF8 208 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 S100A13Q99584 98 aa15.3■□□□□ 0.04
CLN6-221ENST00000637494 ZNF729A6NN14 1252 aaPredicted RBP15.29■□□□□ 0.04
CLN6-221ENST00000637494 H0YJX3 145 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 ALDOBP05062 364 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 ETV1P50549 477 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 PRRX1P54821 245 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 ATXN7L3Q14CW9 347 aaPredicted RBP15.29■□□□□ 0.04
CLN6-221ENST00000637494 PAN3Q58A45 887 aaKnown RBP15.29■□□□□ 0.04
CLN6-221ENST00000637494 ELP2Q6IA86 826 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 Q6P435 159 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 DHRSXQ8N5I4 330 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 ZNF565Q8N9K5 539 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 CNIH3Q8TBE1 160 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 TMEM106AQ96A25 262 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 AKR1E2Q96JD6 320 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 BARHL1Q9BZE3 327 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 BABAM2Q9NXR7 383 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 TAS2R4Q9NYW5 299 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 DPM3Q9P2X0 92 aa15.29■□□□□ 0.04
CLN6-221ENST00000637494 DIMT1Q9UNQ2 313 aaKnown RBP15.29■□□□□ 0.04
CLN6-221ENST00000637494 DSCAML1Q8TD84 2053 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 LEUTXA8MZ59 168 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 GABRPO00591 440 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 KCNAB3O43448 404 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 MMP23AO75900 390 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 TSPAN15O95858 294 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 BDH1Q02338 343 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 IL13RA2Q14627 380 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 TMEM80Q96HE8 168 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 PCDHB16Q9NRJ7 776 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 FOXJ3Q9UPW0 622 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 ZNF281Q9Y2X9 895 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 PKD1L1Q8TDX9 2849 aa15.28■□□□□ 0.04
CLN6-221ENST00000637494 HSPB6O14558 160 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 HTR3BO95264 441 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 CSTBP04080 98 aaKnown RBP15.27■□□□□ 0.04
CLN6-221ENST00000637494 C21orf33P30042 268 aaPredicted RBP15.27■□□□□ 0.04
CLN6-221ENST00000637494 LDLRAD2Q5SZI1 272 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 OR2G6Q5TZ20 316 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 ZNF529Q6P280 563 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 CCBE1Q6UXH8 406 aaPredicted RBP15.27■□□□□ 0.04
CLN6-221ENST00000637494 C11orf44Q8N8P7 122 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 OR4P4Q8NGL7 312 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 SMIM19Q96E16 107 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 COQ2Q96H96 371 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 METTL9Q9H1A3 318 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 ZNF702PQ9H963 129 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 TMEM138Q9NPI0 162 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 PAK1IP1Q9NWT1 392 aaPredicted RBP15.27■□□□□ 0.04
CLN6-221ENST00000637494 CKLFQ9UBR5 152 aa15.27■□□□□ 0.04
CLN6-221ENST00000637494 TET2Q6N021 2002 aaPredicted RBP15.27■□□□□ 0.03
CLN6-221ENST00000637494 MEIKINA0A087WXM9 373 aa15.26■□□□□ 0.03
CLN6-221ENST00000637494 FBXO24O75426 580 aa15.26■□□□□ 0.03
CLN6-221ENST00000637494 CLIC3O95833 236 aa15.26■□□□□ 0.03
CLN6-221ENST00000637494 NFYBP25208 207 aa15.26■□□□□ 0.03
CLN6-221ENST00000637494 ZNF93P35789 620 aaPredicted RBP15.26■□□□□ 0.03
CLN6-221ENST00000637494 GLP1RP43220 463 aa15.26■□□□□ 0.03
CLN6-221ENST00000637494 KCNJ3P48549 501 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms