RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 OR4D6Q8NGJ1 314 aa15.32■□□□□ 0.04
CLN6-213ENST00000636212 CYGBQ8WWM9 190 aa15.32■□□□□ 0.04
CLN6-213ENST00000636212 A0A0G2JK05 382 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 TOR1AO14656 332 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 CHST1O43916 411 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 LIMS3P0CW19 117 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 LIMS4P0CW20 117 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 VSIG10L2P0DP72 767 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 PTGFRP43088 359 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 SOX2P48431 317 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 PPP3R1P63098 170 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 RSU1Q15404 277 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 HEPN1Q6WQI6 88 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 ABHD12Q8N2K0 398 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 KLHDC1Q8N7A1 406 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 PXT1Q8NFP0 134 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 TNFAIP8L1Q8WVP5 186 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 CORO2AQ92828 525 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 CREB3L1Q96BA8 519 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 NR1H4Q96RI1 486 aaPredicted RBP15.31■□□□□ 0.04
CLN6-213ENST00000636212 ZNF649Q9BS31 505 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 PRSS22Q9GZN4 317 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 FAM192AQ9GZU8 254 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 ING3Q9NXR8 418 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 OR6C3Q9NZP0 311 aa15.31■□□□□ 0.04
CLN6-213ENST00000636212 EXOSC1Q9Y3B2 195 aaKnown RBP15.31■□□□□ 0.04
CLN6-213ENST00000636212 ODAMA1E959 279 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 A6NDX4 124 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 SLC33A1O00400 549 aaPredicted RBP15.3■□□□□ 0.04
CLN6-213ENST00000636212 WBP4O75554 376 aaKnown RBP15.3■□□□□ 0.04
CLN6-213ENST00000636212 CDK2P24941 298 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 BRS3P32247 399 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 CEACAM3P40198 252 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 GLIPR1P48060 266 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 GTF2A1P52655 376 aaPredicted RBP15.3■□□□□ 0.04
CLN6-213ENST00000636212 ZP1P60852 638 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 CDK5R1Q15078 307 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 SMN1Q16637 294 aaKnown RBP15.3■□□□□ 0.04
CLN6-213ENST00000636212 LRRC36Q1X8D7 754 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 PRAMEF5Q5TYX0 476 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 RNF144BQ7Z419 303 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 TMEM219Q86XT9 240 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 PACRGLQ8N7B6 248 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 FAM110DQ8TAY7 271 aaPredicted RBP15.3■□□□□ 0.04
CLN6-213ENST00000636212 CAPSLQ8WWF8 208 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 S100A13Q99584 98 aa15.3■□□□□ 0.04
CLN6-213ENST00000636212 ERICH4A6NGS2 130 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 ZNF729A6NN14 1252 aaPredicted RBP15.29■□□□□ 0.04
CLN6-213ENST00000636212 H0YJX3 145 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 ALDOBP05062 364 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 ETV1P50549 477 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 PRRX1P54821 245 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 ATXN7L3Q14CW9 347 aaPredicted RBP15.29■□□□□ 0.04
CLN6-213ENST00000636212 PAN3Q58A45 887 aaKnown RBP15.29■□□□□ 0.04
CLN6-213ENST00000636212 ELP2Q6IA86 826 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 Q6P435 159 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 DHRSXQ8N5I4 330 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 ZNF565Q8N9K5 539 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 CNIH3Q8TBE1 160 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 TMEM106AQ96A25 262 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 AKR1E2Q96JD6 320 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 BARHL1Q9BZE3 327 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 BABAM2Q9NXR7 383 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 TAS2R4Q9NYW5 299 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 DPM3Q9P2X0 92 aa15.29■□□□□ 0.04
CLN6-213ENST00000636212 DIMT1Q9UNQ2 313 aaKnown RBP15.29■□□□□ 0.04
CLN6-213ENST00000636212 DSCAML1Q8TD84 2053 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 LEUTXA8MZ59 168 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 GABRPO00591 440 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 KCNAB3O43448 404 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 MMP23AO75900 390 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 TSPAN15O95858 294 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 BDH1Q02338 343 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 IL13RA2Q14627 380 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 TMEM80Q96HE8 168 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 PCDHB16Q9NRJ7 776 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 FOXJ3Q9UPW0 622 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 ZNF281Q9Y2X9 895 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 PKD1L1Q8TDX9 2849 aa15.28■□□□□ 0.04
CLN6-213ENST00000636212 ANKRD65E5RJM6 399 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 HSPB6O14558 160 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 HTR3BO95264 441 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 CSTBP04080 98 aaKnown RBP15.27■□□□□ 0.04
CLN6-213ENST00000636212 C21orf33P30042 268 aaPredicted RBP15.27■□□□□ 0.04
CLN6-213ENST00000636212 RCN1Q15293 331 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 LDLRAD2Q5SZI1 272 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 OR2G6Q5TZ20 316 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 ZNF529Q6P280 563 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 CCBE1Q6UXH8 406 aaPredicted RBP15.27■□□□□ 0.04
CLN6-213ENST00000636212 C11orf44Q8N8P7 122 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 OR4P4Q8NGL7 312 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 SMIM19Q96E16 107 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 COQ2Q96H96 371 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 METTL9Q9H1A3 318 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 ZNF702PQ9H963 129 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 TMEM138Q9NPI0 162 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 PAK1IP1Q9NWT1 392 aaPredicted RBP15.27■□□□□ 0.04
CLN6-213ENST00000636212 CKLFQ9UBR5 152 aa15.27■□□□□ 0.04
CLN6-213ENST00000636212 TET2Q6N021 2002 aaPredicted RBP15.27■□□□□ 0.03
CLN6-213ENST00000636212 MEIKINA0A087WXM9 373 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms